Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g1336 | ATGGAGATTACAGAGAAGAAGGAAGCAGAGAGCAAGGGCTTGAACCCCCAATCCGTGACTGAAGCGACCTCATTCAATAGTGACAAAGAAGCCGAAGATCGGGAACGCCAGGCTCGTGATCTCAAAGCTGGTCTTCATCCTCTGAAGCACAAGTTTGTATTTTGGTACACTCGTCGAACACCTGGAGTTCGAACCCAAACATCATACGAGGACAATATAAAGAAAATTGTGGATTTCAGTACAGTTGAAGGTTTTTGGATTTGCTATTGCCATTTGGCCCGTCCATCTGCTTTGCCTAGCCCAACTGATTTGCATCTTTTCAAAGAGGGAATTCGCCCCCTATGGGAGGATTCTGCTAATTGCAATGGTGGTAAGTGGATAATTAGATTCAAAAAAGTCGTGTCAGGTCGCTTCTGGGAAGATCTGGTTCTTGCCTTAGTGGGTGACCAACTTGATTATGGTGATAACATATGTGGTGCTGTACTAAGCATTCGTTTCAATGAAGATATATTGAGTGTGTGGAATCGCAATGCATCCGATCATCAGGCTGTAATGGCTCTAAGAGATGCAATCAAACGGCACTTGAAGCTTCCCCATGGCTATGTTATGGAATACAAGGCTCATGATGCTTCTCTCCGTGACAACTCATCTTATAGGAACACATGGTTGAGAGGATGA | 678 | 44.4 | MEITEKKEAESKGLNPQSVTEATSFNSDKEAEDRERQARDLKAGLHPLKHKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWICYCHLARPSALPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDAIKRHLKLPHGYVMEYKAHDASLRDNSSYRNTWLRG* | 226 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20892773 | 20898343 | - | Vvi8g1336 | Vvi8g1336 | 791559 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g1336 | 225 | PANTHER | BNAA10G16710D PROTEIN | 33 | 225 | - | - | |
Vvi8g1336 | 225 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 18 | 218 | IPR023398 | - | |
Vvi8g1336 | 225 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 103 | 126 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 | |
Vvi8g1336 | 225 | Pfam | Eukaryotic initiation factor 4E | 47 | 205 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Vvi8g1336 | 225 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Vvi8g1336 | 225 | SUPERFAMILY | eIF4e-like | 16 | 221 | IPR023398 | - | |
Vvi8g1336 | 225 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 33 | 225 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g1336 | K03259 | - | vvi:100258939 | 470.7 |