Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1336 ATGGAGATTACAGAGAAGAAGGAAGCAGAGAGCAAGGGCTTGAACCCCCAATCCGTGACTGAAGCGACCTCATTCAATAGTGACAAAGAAGCCGAAGATCGGGAACGCCAGGCTCGTGATCTCAAAGCTGGTCTTCATCCTCTGAAGCACAAGTTTGTATTTTGGTACACTCGTCGAACACCTGGAGTTCGAACCCAAACATCATACGAGGACAATATAAAGAAAATTGTGGATTTCAGTACAGTTGAAGGTTTTTGGATTTGCTATTGCCATTTGGCCCGTCCATCTGCTTTGCCTAGCCCAACTGATTTGCATCTTTTCAAAGAGGGAATTCGCCCCCTATGGGAGGATTCTGCTAATTGCAATGGTGGTAAGTGGATAATTAGATTCAAAAAAGTCGTGTCAGGTCGCTTCTGGGAAGATCTGGTTCTTGCCTTAGTGGGTGACCAACTTGATTATGGTGATAACATATGTGGTGCTGTACTAAGCATTCGTTTCAATGAAGATATATTGAGTGTGTGGAATCGCAATGCATCCGATCATCAGGCTGTAATGGCTCTAAGAGATGCAATCAAACGGCACTTGAAGCTTCCCCATGGCTATGTTATGGAATACAAGGCTCATGATGCTTCTCTCCGTGACAACTCATCTTATAGGAACACATGGTTGAGAGGATGA 678 44.4 MEITEKKEAESKGLNPQSVTEATSFNSDKEAEDRERQARDLKAGLHPLKHKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWICYCHLARPSALPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDAIKRHLKLPHGYVMEYKAHDASLRDNSSYRNTWLRG* 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20892773 20898343 - Vvi8g1336 Vvi8g1336 791559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1336 225 PANTHER BNAA10G16710D PROTEIN 33 225 - -
Vvi8g1336 225 Gene3D RNA Cap, Translation Initiation Factor Eif4e 18 218 IPR023398 -
Vvi8g1336 225 ProSitePatterns Eukaryotic initiation factor 4E signature. 103 126 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vvi8g1336 225 Pfam Eukaryotic initiation factor 4E 47 205 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi8g1336 225 MobiDBLite consensus disorder prediction 1 37 - -
Vvi8g1336 225 SUPERFAMILY eIF4e-like 16 221 IPR023398 -
Vvi8g1336 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 33 225 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1336 K03259 - vvi:100258939 470.7