Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1371 ATGGCTTTCCGTTTTCCTGCTCAGGCAGCTGGTGCTGTGGGTGGTGCCCTGGCAATCATGGAGGTGATGCCAACACAGTACAAACACATGCTTGGGGGGCCTTCTTTGAAAGTGGACTTGCATACTGGAGCCATTGCTGAGGGGATTTTGACCTTTACAATTAGCTTTCTCGTGCTTTTGGTTGTCCTCAAAGGTCCAAAGAGTCCAGTATTGAAGACATGGTTGCTTGCCATGGCGACTGTAACTCTGGTCGTCTCAGGCTCTGCTTACACTGGGCCTTCCATGAATCCCGCCAATGCATTTGGATGGGCATATATAAACAATTGGCATAACACATGGGACCAGTTGTACGTTTACTGGATCTGCCCCTTCATAGGGGCAATATTGGCTGCATGGGTCTTCCGATTCCTATTTCCAGCACCAACAAAGCAGAAGAAAGCCTGA 444 49.1 MAFRFPAQAAGAVGGALAIMEVMPTQYKHMLGGPSLKVDLHTGAIAEGILTFTISFLVLLVVLKGPKSPVLKTWLLAMATVTLVVSGSAYTGPSMNPANAFGWAYINNWHNTWDQLYVYWICPFIGAILAAWVFRFLFPAPTKQKKA* 148
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21138601 21144817 - Vvi8g1371 Vvi8g1371 791594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1371 147 PRINTS Major intrinsic protein family signature 46 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g1371 147 PRINTS Major intrinsic protein family signature 77 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g1371 147 PRINTS Major intrinsic protein family signature 117 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g1371 147 Gene3D Glycerol uptake facilitator protein. 1 146 IPR023271 -
Vvi8g1371 147 PANTHER AQUAPORIN SIP1-1 1 146 - -
Vvi8g1371 147 Pfam Major intrinsic protein 7 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g1371 147 SUPERFAMILY Aquaporin-like 2 142 IPR023271 -
Vvi8g1371 147 PANTHER AQUAPORIN SIP1-1 1 146 IPR044222 GO:0015250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1371 K09875 - vvi:100232979 299.671