Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1377 ATGAAAAAACTTTCTATGACCAAACTTCTAGGTGTCCAAACACTAGATAAATTTGTCCCAGTTATGAGAGAAGAGAGACATCTATTTTTGCAGACACTACTGGGAAAAGCTGAAGCAGGTGAGGCGGTTGATGTAAAGAAAGAGATTATGAGGCTAACAAACAACTTAATAACAAAAATGATCATGAGACACAGATGTTCTGACAGCGAAGATGATGCTACTGAAGTGAAGGAGTTGATGACAGAGATGATGAAGCTCATAGGCAGTTTTAACTTGTCGGATTTTGTCTGGTTTTGTAAGAATTTAGACCTACAGGGGTTTAAGAAGAGGGTCAAAGAAGCTCGTGCAAGGTTTGATGCAATAATGGAAAGGGTCATGAAGGCTCGTGAAGAAGAAAGGAGGAAGAAGAGGGACATGAATGATGCAGGAGTCGCAATGAATGACTTTCTTGATATTTTACTTGATATCATGGAAAATGAGAAAGAGGAGATGAGACTGACAAGAGAGAACGTCAAGGGCATCATTTTGGATATTTTTGGAGGGGGAACAGAAACATCTGGTACCGCAGCAATATGGGCAGTAGCGGAGCTAATTAACCACCCAAACATTATGGAGAAAGCGAGACAAGAGATCGATTCTGTAGTGGGAAAGGACAGACTTGTGGAAGAATCAGATATCGCAAACCTTCCTTATCTTCAAGCCATTGTTAAGGAGATACTTAGGCTCCATCCTCCTGGCGCATTAATCGCTAGAGAATCTACAGAAGATTGCACCATTGGAGGTTATCATATTCCTGCAAAGACCCAACTATTTGTTAACCGTTGGGCTATTGGAAGGGACCCAAACTACTGGGAGAACCCACTTCAGTTCTTGCCCGAGAGATTCCTGACAGAAGATGGGAGTCTAAAGAGTCACTTGGATGTAAGGGGCCAACATTTTCATCTGCTGCCATTTGGGAGTGGAAGGAGAATTTGCCCTGGAGTTTCACTAGCACTGCAGGTAATTCAGACAAGCCTGGCTGCTATGATCCAGTGTTTTGAATGGAGAGTTGGTGATGGAGGAAATGGAAATGTTGATATGGAAGAGGGGCCTAACGCAGTCCTTGTACACCCTTTGATTTGTGTCCCAGTGGCTAGGGTCAATCCATTTCCAAAATATACAATGTAA 1167 42.59 MKKLSMTKLLGVQTLDKFVPVMREERHLFLQTLLGKAEAGEAVDVKKEIMRLTNNLITKMIMRHRCSDSEDDATEVKELMTEMMKLIGSFNLSDFVWFCKNLDLQGFKKRVKEARARFDAIMERVMKAREEERRKKRDMNDAGVAMNDFLDILLDIMENEKEEMRLTRENVKGIILDIFGGGTETSGTAAIWAVAELINHPNIMEKARQEIDSVVGKDRLVEESDIANLPYLQAIVKEILRLHPPGALIARESTEDCTIGGYHIPAKTQLFVNRWAIGRDPNYWENPLQFLPERFLTEDGSLKSHLDVRGQHFHLLPFGSGRRICPGVSLALQVIQTSLAAMIQCFEWRVGDGGNGNVDMEEGPNAVLVHPLICVPVARVNPFPKYTM* 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21190542 21194230 - Vvi8g1377 Vvi8g1377 791600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1377 388 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 384 - -
Vvi8g1377 388 Pfam Cytochrome P450 2 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 Coils Coil 150 170 - -
Vvi8g1377 388 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 318 327 IPR017972 GO:0005506|GO:0016705
Vvi8g1377 388 Gene3D Cytochrome P450 1 372 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS E-class P450 group I signature 52 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS E-class P450 group I signature 170 187 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS E-class P450 group I signature 190 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS E-class P450 group I signature 233 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS E-class P450 group I signature 273 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS E-class P450 group I signature 315 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS E-class P450 group I signature 325 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 Coils Coil 104 142 - -
Vvi8g1377 388 PANTHER CYTOCHROME P450 93A2 1 384 - -
Vvi8g1377 388 SUPERFAMILY Cytochrome P450 4 379 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS P450 superfamily signature 181 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS P450 superfamily signature 234 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS P450 superfamily signature 316 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1377 388 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g1377 Vvi13g1182 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1377 K24188 - vvi:100265763 759.985