Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1480 ATGGAGAGGTACTTGAAGAAGGACTTTGATGTACAGTCCAAGCACTCATCGGAAGCGGCGCTTAGGCGATGGAGATCTGCGGTCACAATCGTCAAGAATCGCCGGAGACGCTTCCGCGATGTCGCAAATCTCCACATGCGATCAGAGGCGGAAAAGAAGAAACTCAAAATCCAGGAAAAAATTCGAGTTGCTCTTTATGTTCAAAAGGCGGCACTGCAGTTTATTGATGCTGGTGGTCGAGTTGACCACGGGCTCTCAGAAGAGGCAAGGGAAGCAGGCTTTGGTATTGACCCAGATGAACTTGCCTCCATAGTTCGTGGCCATGATATCATGGGCTTGAAAGCCCATGGTGGACTCGAAGGACTTGCAAGGAAAGTTCATGTTTCACTTGATGAAGGTGTGAAATCAAGTGACATAGCTATGAGGCAAAATATCTATGGCCTCAACCGTTACACTGAGAAACCTTCAAGAACTTTTCTAATGTTTGTGTGGGATGCACTGCATGACTTAACACTAATCATCCTTATGATTTGTGCTGTGATTTCTATAGGAGTAGGCCTTCCCACTGAAGGATGGCCAGAGGGTATGTATAGTGGGGTAGGAATCCTAGTTAGTATATTTTTGGTAGTCCTGGTTACTGCAATCAGTGACTATAGACAATCTCTGCAATTCAGGGATCTGGATAAGGAAAAGAAAAAGATTTTTGTCCAGGTCACTAGAGATGGATATAGACAAAAAATTTCTATTTATGACTTGGTTGTTGGAGATATTGTTCATTTATCTATAGGAGACCAAGTTCCTGCTGATGGGGTTTTTATATCAGGATACAGCTTGTTGATTGATGAGTCAGGCATGTCTGGGGAGAGTGAACCAGTCCACATATCCGAAGAAAAACCGTTTTTTCTTTCAGGAACTAAAGTGACAGATGGTTCAGGGAAGATGCTGGTGACTACGGTTGGTATGAGGACTGAATGGGGAAAGTTAATGGAAACTCTGACTGAGGGTGGGGATGATGAGACCCCGCTTCAGGTGAAGCTGAATGGTGTTGCTACAATTATTGGTAAGATTGGTTTGGCTTTTGCTGTGCTGACTTTTGTGGTCTTGGTTGTAAGGTTTCTCGTGGAAAAAGCACTTCGCAAAGAGTTCACAGATTGGTCTTCAAGTGATGCACTGACACTTCTGAACTATTTTGCTATTGCGGTAACTATAATTGTTGTTGCTGTTCCAGAAGGATTACCATTGGCAGTGACTTTGAGCCTTGCCTTTGCAATGAAAAAATTAATGAAGGAGAAGGCACTTGTGAGACATCTATCTGCATGTGAGACAATGGGTTCTGCTAGTTGTATTTGCACAGATAAGACAGGAACATTAACTACAAATCACATGGTAGTTCATAAGATATGGATCTGTGGAAAAGCTGAAGAGATAAAAGGTAGTGAGAGTGCAGATGTATTGAAATCAGAAATATCTGGAAGAGTTTCAAGCATCCTTTTGCAGGCTATATTTCAAAATACCAGTTCTGAGGTGGTCAAGGACAAAGATGGAAAGAATACCATCTTAGGAACACCAACTGAGTCAGCATTGCTAGAGTTTGGTTTGCTTTTAGGTGGTAATTTTGATGCACAACGCAAAGAAAATAAGATAGTTGAAGTTGAGCCTTTCAATTCTGTCAAGAAGAAGATGTCTGTGCTTGTGGCTCTTCCTGATGGCAGAATCCGAGCTTTTTGTAAAGGTGCATCTGAGATAATCTTATCCATGTGCAACAAGATTGTTAATTATGATGGAGAATCTATTCCTCTCTCGGAAGTACAGGAAAGGAATATTACTGATATTATAAATGGTTTTGCATCTGAAGCCTTGAGAACCCTCTGCTTGGCTTTCAAAGATGTGGATGATCCTTCCAATGAAAACGACATCCCAACTTATGGCTATACGTTGATAATGGTTGTTGGGATTAAGGATCCAACACGTCCTGGGGTCAAAGATGCTGTTCAAACTTGTTTAGCAGCTGGAATTGCTGTCCGGATGGTCACTGGTGACAATATAAACACAGCCAAAGCTATAGCTAAAGAATGTGGCATACTAACAGAGGATGGTTTGGCCATAGAAGGACCTGAATTTCACAGCATGAGTCTTGAGGAGATGAGGGAAATAATACCAAGAATTCAGGTCATGGCTCGGTCTTTGCCTTCAGACAAGCACACTTTGGTAACCCATCTCAGGAAATTGTATGGTGAGGTTGTTGCAGTGACAGGTGATGGGACAAATGATGCACCAGCTTTGCATGAGGCTGACATTGGGCTTGCCATGGGCATAGCTGGAACAGAGGTTGCCAAAGAAAATGCTGATGTCATCATAATGGACGATAATTTTGCCACTATAGTAAATGTAGCCAAATGGGGCCGTGCAGTATATATAAACATTCAAAAGTTTGTGCAGTTCCAGTTGACCGTTAATGTGGTTGCGCTTGTAGTAAATTTTGTTTCTGCGTGCATCACAGGATCTGCCCCCTTTACGGCTGTCCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTCGGTGCATTGGCATTGGCGACAGAACCTCCAAACGATGCACTAATGAAAAGGCCTCCTGTTGGGAGGAGTGTGAGTTTTATCACCAAGACCATGTGGAGGAATATTATCGGTCAGAGTATATATCAACTGATCGTCATCGGAGTCATCAGTGTTTATGGGAAGCGGCTTTTAAGACTTAGTGGTTCAGATGCGAGTGATATCATTGATACTTTCATATTCAACACCTTTGTGTTCTGCCAGCTGTTCAATGAAATAAACAGCCGTGATATTGAGAAGATAAACATTTTTCGTGGTATGTTTGACAGCTGGATATTTATCATAGTCATGGTCTGCACAGTGGCATTCCAAATAATTATAGTTGAGCTCCTGGGCACCTTTGCAAGCACTGTGCCCCAAAGTTGGCAACTATGGATATTGAGCATCTTGATCGGAGCGGTAGGCATGCCTGTTGCAGTTGTTTTAAAATGCATCCCAGTTGAAACAGGCAGTTTTAAGCAGCATGATGATTACGAGGCACTACCTAGTGGACCAGAACAGGCATGA 3102 42.65 MERYLKKDFDVQSKHSSEAALRRWRSAVTIVKNRRRRFRDVANLHMRSEAEKKKLKIQEKIRVALYVQKAALQFIDAGGRVDHGLSEEAREAGFGIDPDELASIVRGHDIMGLKAHGGLEGLARKVHVSLDEGVKSSDIAMRQNIYGLNRYTEKPSRTFLMFVWDALHDLTLIILMICAVISIGVGLPTEGWPEGMYSGVGILVSIFLVVLVTAISDYRQSLQFRDLDKEKKKIFVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADGVFISGYSLLIDESGMSGESEPVHISEEKPFFLSGTKVTDGSGKMLVTTVGMRTEWGKLMETLTEGGDDETPLQVKLNGVATIIGKIGLAFAVLTFVVLVVRFLVEKALRKEFTDWSSSDALTLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMKEKALVRHLSACETMGSASCICTDKTGTLTTNHMVVHKIWICGKAEEIKGSESADVLKSEISGRVSSILLQAIFQNTSSEVVKDKDGKNTILGTPTESALLEFGLLLGGNFDAQRKENKIVEVEPFNSVKKKMSVLVALPDGRIRAFCKGASEIILSMCNKIVNYDGESIPLSEVQERNITDIINGFASEALRTLCLAFKDVDDPSNENDIPTYGYTLIMVVGIKDPTRPGVKDAVQTCLAAGIAVRMVTGDNINTAKAIAKECGILTEDGLAIEGPEFHSMSLEEMREIIPRIQVMARSLPSDKHTLVTHLRKLYGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALVVNFVSACITGSAPFTAVQLLWVNLIMDTLGALALATEPPNDALMKRPPVGRSVSFITKTMWRNIIGQSIYQLIVIGVISVYGKRLLRLSGSDASDIIDTFIFNTFVFCQLFNEINSRDIEKINIFRGMFDSWIFIIVMVCTVAFQIIIVELLGTFASTVPQSWQLWILSILIGAVGMPVAVVLKCIPVETGSFKQHDDYEALPSGPEQA* 1034
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22291995 22308730 + Vvi8g1480 Vvi8g1480 791703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1480 1033 PANTHER CATION TRANSPORTING ATPASE 3 1019 - -
Vvi8g1480 1033 Pfam Cation transporter/ATPase, N-terminus 116 182 IPR004014 -
Vvi8g1480 1033 Gene3D - 447 796 IPR023214 -
Vvi8g1480 1033 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Vvi8g1480 1033 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1011 IPR023298 -
Vvi8g1480 1033 SMART Cation_ATPase_N_a_2 115 187 IPR004014 -
Vvi8g1480 1033 SFLD p-type atpase 432 803 IPR044492 -
Vvi8g1480 1033 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Vvi8g1480 1033 Gene3D - 460 655 IPR023299 GO:0000166
Vvi8g1480 1033 SFLD C1.7: P-type atpase like 432 803 - -
Vvi8g1480 1033 Gene3D - 165 1009 - -
Vvi8g1480 1033 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 660 IPR023299 GO:0000166
Vvi8g1480 1033 Gene3D - 133 333 - -
Vvi8g1480 1033 Pfam E1-E2 ATPase 235 429 - -
Vvi8g1480 1033 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 716 840 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi8g1480 1033 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 202 476 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi8g1480 1033 Pfam Cation transporting ATPase, C-terminus 836 1009 IPR006068 -
Vvi8g1480 1033 Pfam Cation transport ATPase (P-type) 506 590 - -
Vvi8g1480 1033 SUPERFAMILY HAD-like 449 856 IPR036412 -
Vvi8g1480 1033 Gene3D - 16 77 - -
Vvi8g1480 1033 CDD P-type_ATPase_Ca_PMCA-like 142 884 - -
Vvi8g1480 1033 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1019 - -
Vvi8g1480 1033 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 114 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vvi8g1480 1033 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi8g1480 1033 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi8g1480 1033 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi8g1480 1033 SUPERFAMILY Calcium ATPase, transduction domain A 235 331 IPR008250 -
Vvi8g1480 1033 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Vvi8g1480 1033 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Vvi8g1480 1033 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Vvi8g1480 1033 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Vvi8g1480 1033 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Vvi8g1480 1033 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1480 K01537 - vvi:100241741 1977.22