Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g154 ATGTCAACTAATGGAACTCTTGAAGGGAGGAATCCACCACCAAAATTTTGCTCACATATAATCTGTAATATTTTCTTGATTTTCAAATTTAAGTTTTATTGTCCAGAATTGTCCTTCTTCAGCATAAAGAGATTTCCCCATTGCTTGGATTGTGTATTCAGGCACCTAGAACATCCCATGAAGAGACGTTCTCAAGCTAATGCAGTTGCACAACAAGCGTTGATTGCTCATTGGCAAAGCATTGTGAAAAGCCTGAATTATTACTTGAAGATAATGAAAGCAAACCATGTTCCGCCATTCGTAGTCTGCAAGGTATTCACTCAGATATTTTCATTCATCAATGTTCAATTATTCAACAGTCTCCTTTTGAGGCGTGAATGTTGCTCATTCAGCAATGGGGAGTTTGTTAAGACAGGATTGGCTGAGTTAGAAAACTGGTGCCATGAAGCAACCGAAGAGGTTATTTCAAGCATGAGAGTAATGATGACTGAAGATTCGAACAATGCTGTCAGCAGTTCGTTCTTATTGGATGATGACTCAAGTATTCCATTCACTGTGGATGATATTTCCAAGACAATGCAACAAATAGAAGTTTCTGATATTGATCCTCCACCACTGATTCGTGAAAACTCAGGCTTCTCATTCTTATTACTAAGGGTTGAATGA 666 38.14 MSTNGTLEGRNPPPKFCSHIICNIFLIFKFKFYCPELSFFSIKRFPHCLDCVFRHLEHPMKRRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFVVCKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKTGLAELENWCHEATEEVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISKTMQQIEVSDIDPPPLIRENSGFSFLLLRVE* 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3512186 3515902 - Vvi8g154 Vvi8g154 790377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g154 221 ProSiteProfiles Dilute domain profile. 35 221 IPR002710 -
Vvi8g154 221 Pfam DIL domain 105 153 IPR002710 -
Vvi8g154 221 SMART DIL_2 104 180 IPR002710 -
Vvi8g154 221 PANTHER MYOSIN-11 61 154 - -
Vvi8g154 221 PANTHER MYOSIN-11 153 218 - -
Vvi8g154 221 PANTHER MYOSIN 153 218 - -
Vvi8g154 221 PANTHER MYOSIN 61 154 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g154 K10357 - vvi:100266890 185.652