Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g316 ATGGAGGTCTCTCCGGAGAATGCAGATGATGAGAATTTAGTGGTTCATGCCACTGCCGGAGCCGTGGCTGGGGCTTTAGCTGCAGCTGTTACAACTCCACTTGATGTTGTCAAAACTCAGTTGCAGTGCCAGGGTGTCTGTGGATGTGATAGATTTTCTAGTGGTTCCATTAGGGATGTTCTTGAAACCATAGTGAAGAAGGATGGTTACGGTGGGCTTATGAGGGGATGGATCCCCAGGATGCTCTTCCATGCACCAGCCGCTGCAATCTGCTGGTCCACCTATGAAGCAGCAAAAGCCTTCTTTGAAGAGCAGAATGGCCGTAGTAACCTGGTTAACTGA 342 49.71 MEVSPENADDENLVVHATAGAVAGALAAAVTTPLDVVKTQLQCQGVCGCDRFSSGSIRDVLETIVKKDGYGGLMRGWIPRMLFHAPAAAICWSTYEAAKAFFEEQNGRSNLVN* 114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9434298 9437790 + Vvi8g316 Vvi8g316 790539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g316 113 PANTHER MITOFERRIN-1-RELATED 1 109 - -
Vvi8g316 113 Gene3D Mitochondrial carrier domain 2 112 IPR023395 -
Vvi8g316 113 PANTHER MITOFERRIN-LIKE 1 109 - -
Vvi8g316 113 SUPERFAMILY Mitochondrial carrier 9 96 IPR023395 -
Vvi8g316 113 Pfam Mitochondrial carrier protein 11 105 IPR018108 -
Vvi8g316 113 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 101 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g700 Vvi8g316 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g316 K15113 - vvi:100249984 212.231