Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g325 ATGCTGTATCAGAGCTCCCACCCATCCCTTTCTCTCCTCCTTATTTACCGTTTAATGGGTGATTTGTGCCTGATTTCCGATAATAAGAAAAAGAAATGGAAGAGCCATCCGCGTGACAAATTCAAGTCCTTCCTCTTCAACCACCTGTTCTTGTTGGTTCAGGTGCTGCTTCTCACCTTTCCACTTGTTTCGGGCCATCCATGGGATGGGGTGGTGGTGACTCAAGCAGATTATCAGGCACTCAAAGCCTTAAAACATGAATTCGTTGATTTGAAAGGCGTTTTGAGTACCTGGAATGACAGCGGTTTGGAAGCTTGTTCTGGTGGGTGGATAGGAATCAAGTGTGCTCGGGGACAGGTTATTGCCATTCAACTTCCATGGAAGGGATTGGGGGGCCGAATCTCTGAGAAGATAGGTCAGCTGCAAGCACTCCGGAGGATTAGTCTCCATGACAATCTTCTTGTTGGCCCTGTCCCTACGTCGCTCGGGTTCCTTCCCAACCTTAGAGGTGTTTATCTCTTCAATAACAGGCTTTCAGGTTCAGTCCCGCCTTCTATTGGCTACTGCCTTCTTCTTCAGACCCTTGATGTCAGTAACAATCTGCTCACTGGGACTATTCCGCCTAGTCTGGCGAACTCCACCAAATTATACAGACTCAATCTGAGCTTCAACTCATTCTTTGGGTCAATCCCGGTTAGGAAGAATCTTGAAGGGATTTCTCTGAGTCATAACCAGATTGATGGGATCATACCTGATGAATTAGGAAGTCTCTCTAGGCTCCAAGTGCTAGATTTGGCAATCGCCTCAATGGCAATATCCCAGAAGCCATGGACAGGTTGCAAAATCTCGATTTCAGTGTTGCTTACAACAATCTCTCCGGTTCTGTTCCATCCCTCCTCTCCCAAAAGTTCAATTCAAGCTCTTTTGTAG 930 46.67 MLYQSSHPSLSLLLIYRLMGDLCLISDNKKKKWKSHPRDKFKSFLFNHLFLLVQVLLLTFPLVSGHPWDGVVVTQADYQALKALKHEFVDLKGVLSTWNDSGLEACSGGWIGIKCARGQVIAIQLPWKGLGGRISEKIGQLQALRRISLHDNLLVGPVPTSLGFLPNLRGVYLFNNRLSGSVPPSIGYCLLLQTLDVSNNLLTGTIPPSLANSTKLYRLNLSFNSFFGSIPVRKNLEGISLSHNQIDGIIPDELGSLSRLQVLDLAIASMAISQKPWTGCKISISVLLTTISPVLFHPSSPKSSIQALL* 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 9633507 9635000 - Vvi8g325 Vvi8g325 790548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g325 309 Gene3D Ribonuclease Inhibitor 235 287 IPR032675 -
Vvi8g325 309 Gene3D Ribonuclease Inhibitor 74 234 IPR032675 -
Vvi8g325 309 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 30 232 - -
Vvi8g325 309 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 30 232 - -
Vvi8g325 309 Pfam Leucine rich repeat N-terminal domain 76 115 IPR013210 -
Vvi8g325 309 Pfam Leucine Rich Repeat 192 211 IPR001611 GO:0005515
Vvi8g325 309 SUPERFAMILY L domain-like 76 266 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g325 Vvi13g111 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g325 - - vvi:100243128 426.017