Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g364 ATGGGCGCATCCCTGCTCCGTCTTCATTTCCATGATTGCTTTGTTAATGGGTGTGATGCATCAATCCTGCTGGACGACACATCCAACTTCACCGGTGAGAAAACTGCGGTACCAAATGCAAATTCTGTGAGGGGATTTGATGTGATTGACACCATCAAATCTCAAGTGGAGAGCTCCTGCCCCGGTGTGGTTTCCTGCGCTGACATCCTGGCCGTTGTTGCTCGGGACTCGGTCGTTGCTTTGGGTGGACCAAGCTGGACTGTTCGATTGGGCAGAAGAGACTCGACCACAGCGAGCTTAAGTACAGCTAACAGTGACATCCCTGCCCCCACTTTGAACCTCAGCGGTCTCATCTCTTCCTTCTCAAACAAAGGTTTCAGTGCCAATGAAATGGTGGCTCTCTCAGGATCTCACACAATTGGACAAGCAAGGTGCACAAACTTCCGAGATCGGTTGTACAATGAAACCAACATAGATGCCTCATTCCAGTCGTCCTTGCAAGCCAACTGTCCCAGCTCTGGGGGTGACAACAATCTCTCTCCGCTTGACACCAAAAGCCCTACAACTTTTGACAATGCATACTTCACTAACTTGGTGAACAACAAGGGCCTTCTCCACTCTGATCAACAGCTCTTCAATGGGGGCTCCACGGATTCTCAAGTGACCACATACAGCACCAAGTCCACCACTTTCTTCACAGACTTTGCAAATGCCATAGTGAAGATGGGAAACCTCAGCCCACTTACCGGAACCAGTGGCCAGATCAGAACCAACTGCAGGAAAACCAACTGA 792 50.0 MGASLLRLHFHDCFVNGCDASILLDDTSNFTGEKTAVPNANSVRGFDVIDTIKSQVESSCPGVVSCADILAVVARDSVVALGGPSWTVRLGRRDSTTASLSTANSDIPAPTLNLSGLISSFSNKGFSANEMVALSGSHTIGQARCTNFRDRLYNETNIDASFQSSLQANCPSSGGDNNLSPLDTKSPTTFDNAYFTNLVNNKGLLHSDQQLFNGGSTDSQVTTYSTKSTTFFTDFANAIVKMGNLSPLTGTSGQIRTNCRKTN* 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10330215 10332233 + Vvi8g364 Vvi8g364 790587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g364 263 PANTHER PEROXIDASE 72-RELATED 1 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 Gene3D - 1 260 - -
Vvi8g364 263 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Vvi8g364 263 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PANTHER PEROXIDASE 1 263 - -
Vvi8g364 263 CDD secretory_peroxidase 1 262 IPR033905 GO:0004601|GO:0042744
Vvi8g364 263 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Vvi8g364 263 Gene3D Peroxidase, domain 2 108 242 - -
Vvi8g364 263 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Plant peroxidase signature 237 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 ProSiteProfiles Plant heme peroxidase family profile. 1 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 SUPERFAMILY Heme-dependent peroxidases 1 263 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi8g364 263 Pfam Peroxidase 1 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g733 Vvi8g364 ECH
Vvi6g734 Vvi8g364 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g364 K00430 - vvi:100263665 523.472