Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g370 ATGGAAAATAATGGGAGTATCCTGATGCAACGGTATGAATTAGGGAAATTATTAGGTCAAGGCACCTTTGCCAAGGTCCATCATGCCAGGAACCTTAAAACTGGCACCAGTGTTGCCATTAAGATAATTGATAAAGAGAAGATTTTGAAGGTTGGGATGGTGGATCAGATTAAGCGAGAGATTTCTGTAATGAGACTGGTTAGACACCCAAATGTGGTAGAGCTTTATGAGGTTATGGCCAGCAAAACGAAGATTTACTTTGTCATGGAATATGCTAAAGGAGGGGAGCTCTTCAACAAGGTAGCCAAAGGAAAGCTCAAGGAGGATGTTGCAAGGAAATATTTTCAACAGCTGATCAGTGCGGTTGATTTCTGTCACAGTAGAGGTGTGATCAATAGGAAAGGCTATGATGGAGCCAAAGCTGATATATGGTCATGTGGGGTGGTCTTATTCGTTTTGTTGGCTGGCTATCTCCCATTTCATGATTCAAATCTGATGGAGTTGTATAGGAAGATTGGTAAGGCAGAATATAGATTCCCTAACTGGTTCCCTTCGGAAGTACGAAGGTTGCTGTCAAAGATCTTGGATCCAAACCCAAAGACTAGGATTTCCATTACCAAAATAATGGAAAATTCTTGGTTCCAAAAGGGTCTTGATCCTGCTGTATTTGGTTCTAATGAGAGTGCCAGCACCACTGCTGAGGCAAAGCAAGAATTGGCGACGCTTAGTAACTTGAATGCGTTTGATATCATTTCCTTTTCAGCAGGGTTTGACTTGTCTGGTTTGTTCGAGGAAAATAAGCAAAAGAAAGAAGTGCGATTTACATCTAGGCAGCCAGCCTCAGCCATCATCTCTAAACTGGAGGACATTGCTAAGCGTTTGATGCTGAAGGTGAAGAAGAAGGATGGTGGGTTGTTGAAAATGGAAGGTTCAAAGGAAGGCAGGAAAGGCGTCTTGTCCATTGATGCAGAGATCTTTGAGGTGACTCCATCTTTTCATTTGGTGGAGGTGAAGAAGTCCAGTGGGGACACGTTGGAGTACCAGAAAATAGTGAAACAGGAGATAAGACCAGCTCTCAAGGACATTTGTTTGTTGTTGACATCATTACTGCATAACGTATTTAAAGTTTCTCAGTTCACATATCACGATGGTTCTATTTCCTTATCCTCAAGCCTTCAGACGATGGATGATGGCAGAATACAAACAGTAACTTAA 1215 41.98 MENNGSILMQRYELGKLLGQGTFAKVHHARNLKTGTSVAIKIIDKEKILKVGMVDQIKREISVMRLVRHPNVVELYEVMASKTKIYFVMEYAKGGELFNKVAKGKLKEDVARKYFQQLISAVDFCHSRGVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHDSNLMELYRKIGKAEYRFPNWFPSEVRRLLSKILDPNPKTRISITKIMENSWFQKGLDPAVFGSNESASTTAEAKQELATLSNLNAFDIISFSAGFDLSGLFEENKQKKEVRFTSRQPASAIISKLEDIAKRLMLKVKKKDGGLLKMEGSKEGRKGVLSIDAEIFEVTPSFHLVEVKKSSGDTLEYQKIVKQEIRPALKDICLLLTSLLHNVFKVSQFTYHDGSISLSSSLQTMDDGRIQTVT* 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10381812 10385443 + Vvi8g370 Vvi8g370 790593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g370 404 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 130 - -
Vvi8g370 404 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 130 365 - -
Vvi8g370 404 ProSiteProfiles Protein kinase domain profile. 12 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g370 404 Gene3D Transferase(Phosphotransferase) domain 1 3 132 - -
Vvi8g370 404 Pfam NAF domain 243 300 IPR004041 GO:0007165
Vvi8g370 404 ProSiteProfiles NAF domain profile. 240 264 IPR018451 GO:0007165
Vvi8g370 404 SUPERFAMILY KA1-like 270 353 IPR028375 -
Vvi8g370 404 Pfam Protein kinase domain 12 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g370 404 PANTHER - 2 130 - -
Vvi8g370 404 PANTHER - 130 365 - -
Vvi8g370 404 CDD CIPK_C 246 360 - -
Vvi8g370 404 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Vvi8g370 404 SUPERFAMILY Protein kinase-like (PK-like) 8 234 IPR011009 -
Vvi8g370 404 Gene3D Kinase associated domain 1, KA1 223 364 - -
Vvi8g370 404 Gene3D Transferase(Phosphotransferase) domain 1 133 219 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g370 Vvi13g140 ECH
Vvi6g742 Vvi8g370 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76804 PF00069 Pkinase 1.50E-30 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g370 K07198 - vvi:100243133 667.537