Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g375 ATGAGCAGTGAGCACCACCGGTCCACCACATCAAGGCGCTTTGTTCCTTCTCCGGAAATTGTGGTTTCAGAGATGGAGAACGATACTGGAGATGCTGATCCGGCGAACGAAGATATTCAGCCGGAGATAACTTTGTTCGGAAAGTACGCGGTTGGAAAGTTGCTCGGCTATGGAGCCTTCGCGAAGGTCTACCACGCAAGGAACATCCGAACGGGCCAAAGCGTGGCGATCAAGGCGGTGAGCAAGAAAAAGGTGATGAAAGGAGGATTGACGGCCCATGTGAAGCGGGAGATTTCTATCATGCGCCGGCTACGGCATCCTCACATCGTTAAGCTGTATGAGGTCTTGGCGACGAAAACGAAGATCTACTTCCAGCTGATCTCCGCCATTGGATATTGCCACTCCCGAGGCGTTTTCCACCGCGATTTGAAGCCGGAGAACCTTCTTCTCGACGAGAATTGGAACCTTAAAGTCTCCGATTTCGGTCTCAGCGCCGTGAAGGATCAGATCCGGGCCGATGGTCTCCTACACACTCTCTGCGGTACCCCGGCGTATGTGGCGCCGGAGATTCTAGCGAAGAAAGGTTACGATGGTACCAAGGTGGATATCTGGACTTGCGGCATCATTCTCTATGTATTGAACGCCGGTTATCTTCCGTTCAACGATCCAAACCTCATGGGAATGTACCGGAAGATCTATAAAGGCGAGTTTCGGTGTCCGAAATGGACTTCTCCTGATATGCGACGCCTTCTATCACGCCTTCTCGATACGAATCCAGAGACGAGAATCACTGTCGATGAGATCATCCGTGACCCTTGGTTCCAAAAGGGTTACAAGGAAATTAAATTCCACGTGGAAGATTTTGATTTCAAGGATCACGACGACGACGACGACAACGCCGAGTACATGAACGCGTTCCACATTATCTCATTCTCGTCCGGTTTCGAATTCTCCAGTATGTTGAACGATTCCGGCATTTCGGTGGCCGGTGAAAGATTCGTATCGGCCGAGTCACCGGAGAAAATAATAGAAAAGGTCGAGGACGTGGCAAAAAAGGAGAACGTAACAGTGACGAGAAAGGAAAATTGGGGAGTGATGTTGGAGGGACAAAACGGTAATTTCGCCTTGATAATGGAGATATATCGGTTGACGGAGAAGCTGGTCCTGGTAGAGGTGAGGAAGAAAGAGATACTATATATACAAGCTATTTTTATTTTAGTTCCCTCTTTGCCCTTTCATTTTTCTCTTTTTTCCCCTTTGTTTTTCCGAAAAAAAGGTGACACATCGATGGCGTGGAGCCGTTTTGTTTAA 1311 48.67 MSSEHHRSTTSRRFVPSPEIVVSEMENDTGDADPANEDIQPEITLFGKYAVGKLLGYGAFAKVYHARNIRTGQSVAIKAVSKKKVMKGGLTAHVKREISIMRRLRHPHIVKLYEVLATKTKIYFQLISAIGYCHSRGVFHRDLKPENLLLDENWNLKVSDFGLSAVKDQIRADGLLHTLCGTPAYVAPEILAKKGYDGTKVDIWTCGIILYVLNAGYLPFNDPNLMGMYRKIYKGEFRCPKWTSPDMRRLLSRLLDTNPETRITVDEIIRDPWFQKGYKEIKFHVEDFDFKDHDDDDDNAEYMNAFHIISFSSGFEFSSMLNDSGISVAGERFVSAESPEKIIEKVEDVAKKENVTVTRKENWGVMLEGQNGNFALIMEIYRLTEKLVLVEVRKKEILYIQAIFILVPSLPFHFSLFSPLFFRKKGDTSMAWSRFV* 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 10442917 10444884 - Vvi8g375 Vvi8g375 790598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g375 436 PANTHER - 125 397 - -
Vvi8g375 436 PANTHER - 34 124 - -
Vvi8g375 436 SUPERFAMILY Protein kinase-like (PK-like) 46 284 IPR011009 -
Vvi8g375 436 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 125 397 - -
Vvi8g375 436 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 34 124 - -
Vvi8g375 436 Pfam Protein kinase domain 121 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g375 436 ProSiteProfiles Protein kinase domain profile. 49 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g375 436 Pfam NAF domain 301 358 IPR004041 GO:0007165
Vvi8g375 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Vvi8g375 436 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Vvi8g375 436 CDD CIPK_C 304 396 - -
Vvi8g375 436 Gene3D Transferase(Phosphotransferase) domain 1 126 276 - -
Vvi8g375 436 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Vvi8g375 436 Gene3D Kinase associated domain 1, KA1 299 402 - -
Vvi8g375 436 Gene3D Phosphorylase Kinase; domain 1 38 125 - -
Vvi8g375 436 SMART serkin_6 49 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g746 Vvi8g375 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76805 PF00069 Pkinase 5.30E-40 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g375 - K12761 vvi:100260217 692.189