Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g441 ATGGCTAAAATTCGATTGATTGTATCTGATTTTTTGTTAGCATTCATGTGGGTATCGTCTGGAGCTTTGAATAAGCTCTTCGTGAATAGGGTCTTGGGATGGGGCCATGAGCCAAGAGGTGAAATCATGAAGGCAACGCTTTCAATCATCAACATGTTCTTCTTCGCCTTCTTGGGGAAGATTAGCAAGGGTGGGGCATACAATCCTCTCACTGTGTTGGCTGGGGCTATTTCTGGGGATTTCAGTCGTTTTCTCTTCACTGTTGGTGCAAGGATTCCTGCTCAGGTAATTGGATCTATCACTGGGGTTAGGCTCCTCATTAACACCTTTCCTGAAGTGGGATTTGGGCCACGTTTGACTGTTGACATCCATCATGGTGCACTGACAGAAGGGTTTCTGACATTTGCAATTGTTATGATCTCACTTGGGCTCTCGAGAAACATCCCTGGGAGCTTCTTCATGAAAACTTGGATCTCAAGTGTGTCCAAGCTAGCTCTTCATATACTTGGCTCTGATCTAACTGGTGGATGCATGAACCCAGCTGCTGTAATGGGATGGGCTTATGCTCGCGGGGATCATATAACCAAGGAGCATATACTTGTTTACTGGCTTGCCCCAATGGAGGCAACTCTACTGGCAGTCTGGACATTCCGGTTGCTGGTTCAGCCACACAAGGAGGAGAAAGAAAAAATGAAGGCTAAATCAGAGTAA 711 45.99 MAKIRLIVSDFLLAFMWVSSGALNKLFVNRVLGWGHEPRGEIMKATLSIINMFFFAFLGKISKGGAYNPLTVLAGAISGDFSRFLFTVGARIPAQVIGSITGVRLLINTFPEVGFGPRLTVDIHHGALTEGFLTFAIVMISLGLSRNIPGSFFMKTWISSVSKLALHILGSDLTGGCMNPAAVMGWAYARGDHITKEHILVYWLAPMEATLLAVWTFRLLVQPHKEEKEKMKAKSE* 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11323613 11328620 - Vvi8g441 Vvi8g441 790664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g441 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g441 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g441 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g441 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g441 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g441 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
Vvi8g441 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 - -
Vvi8g441 236 Pfam Major intrinsic protein 4 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vvi8g441 236 Gene3D Glycerol uptake facilitator protein. 3 235 IPR023271 -
Vvi8g441 236 SUPERFAMILY Aquaporin-like 5 232 IPR023271 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g441 K09875 - vvi:100246584 451.055