Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g46 ATGAACGATGCAGATGTCTCCAGGCAGATACAGCAGATGGTCAGATTCATTCTGCAGGAGGCCGAAGAGAAAGCTAACGAAATCTCTGTTTCTGCTGAAGAGGAATTCAACATTGAGAAATTGCAACTAGTTGAAGCTGAAAAGAAGAAGATTAGACAAGAATATGAGCGGAAGGCAAAGCAGGTGGAAATTCGAAGGAAAATTGAGTACTCGATGCAGCTGAATGCATCCCGCATCAAGGAACTTTTGCGTGTTTCTGATGACACAAATGGATACAAAATGCTTCTTAAAGGTTTGATTGTTCAGAGTTTACTACGACTGAAGGAGCCAGCAGTGTTGCTGCGCTGCAGAGAGATTGACCTTGGGCCAGTTGAGTCTGTTTTGGGGGAAGCAAAACAAGAGTATGCTGACAAAGCCAAAGTTCATGTCCCCAAAGTTACCATTGACAACCTTGTATACCTCCCACCACCTCCCAGTAGTGTTGATTCCCACAGCCTCTTCTGCTCAGGAGGAGTGGTTTTGGCTTCACAGGACGGGAAGATAGTCTGTGAGAACACTCTGGATGCACGATTGGATGTTGTATTCCGACAGAAACTGCCTGAGATCAGAAAGCTTCTTTTTGGACAAGTTGTTGCTTGA 639 44.91 MNDADVSRQIQQMVRFILQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKAKQVEIRRKIEYSMQLNASRIKELLRVSDDTNGYKMLLKGLIVQSLLRLKEPAVLLRCREIDLGPVESVLGEAKQEYADKAKVHVPKVTIDNLVYLPPPPSSVDSHSLFCSGGVVLASQDGKIVCENTLDARLDVVFRQKLPEIRKLLFGQVVA* 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 896424 901951 - Vvi8g46 Vvi8g46 790269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g46 212 SUPERFAMILY V-type ATPase subunit E-like 79 208 - -
Vvi8g46 212 Pfam ATP synthase (E/31 kDa) subunit 80 207 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi8g46 212 Gene3D - 75 210 IPR038495 -
Vvi8g46 212 Coils Coil 38 65 - -
Vvi8g46 212 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 81 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi8g46 212 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 80 211 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vvi8g46 212 Gene3D - 1 62 - -
Vvi8g46 212 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 80 211 - -
Vvi8g46 212 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 81 - -
Vvi8g46 212 Hamap V-type proton ATPase subunit E [atpE]. 8 208 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g46 K02150 - vvi:100248521 396.741