Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi8g476 | ATGGAATCTGAAGCTAGACCCGATACGGATATCGGGTCCCAGGGATTAAGAAAACGGATTCTCCAGATGGGACATTCATGGCTAACTCCATTCCCTGGTGACGAAGTCCAAGTTCATTACAGTGGGCGCGTTGAGGGTGGGGCATATTTTGATTCCAGCCGCGATAGAGGAGCTCCATTCTGGTTCAAATTAGGCCAATGTGAAGTTATCAAAGGATGGGAAGAGGGGGTTGCCACGATGAAGAAGGGTGAGAGGGCAATTTTTACAATACCACCAGATTTGGCCTATGGAGAGACTGGTTTACCACCTCTTATTCCTCCCAATTCAACACTCATTTATGATATTGAAATGCTGTCTTGGAATACCATCAGAGACTTAACTGGTGATGGAGGAATATTGAAGAAGATAATGACAGAGGGCGAGGGATGGGCCACTCCTAAGGATGGAGATGAAGTTTTAGTTAAGTATGAGGTAAGGCTCGAGAATGGAACAGAAGTCTCCAAGTGTGATGAGGGTTCGGAATTTCATTTAGGAGATGATTTGCCTTGTCCGGCTATAAGCAAAGCAGTAAAGACAATGAGGAGGGGTGAGAAAGCAGAGCTATCAGTGAGGTTCTCTTATGGTTTCAAACAAATTGGAAATGAAGTTACTAGAACAGATGGTGCTATTCCACCCAATTCAAATTTAATCATTTGTCTTGAACTGATATCATGGAAAAGCGTTATTGATATCATGGGAGACAAGAAGGTGCTTAAGAAGATCATGAAAGTTGGTGAAGGCTTTGACCGTCCTAGTGAAGGATCCCTTGCAAAGGTGGCATACATTGGTAAACTTGAAAATGGAACTGTTTTTGAGAGGAAGGGGTCCAGAGAAGAACCTTTGGAGTTATTATGTTTTGAAGAACAAATCAATGAAGGTTTAGACAGAGCAATCATGACAATGCGAAAAGGAGAGCAGGCACTCGTTACCATCCAAGCAGATGGCCATGAAGTTTCAGGAATGGTGTCCGCAAATTCACTGCATCATTATGAAGTCGAGTTGATAGACTTCACTAAGGAGAGACCCTTTTGGAAGATGGAAAATCATGAGAAACTAGAAGCTTGTGAGAGGAAGAAGCATGATGGGAATATGCTGTTCAAGGCTGGGAAATTTTGGCATGCCTCCAAGAAATATGAGAAGGAAATTTACCTAGAATGA | 1197 | 42.77 | MESEARPDTDIGSQGLRKRILQMGHSWLTPFPGDEVQVHYSGRVEGGAYFDSSRDRGAPFWFKLGQCEVIKGWEEGVATMKKGERAIFTIPPDLAYGETGLPPLIPPNSTLIYDIEMLSWNTIRDLTGDGGILKKIMTEGEGWATPKDGDEVLVKYEVRLENGTEVSKCDEGSEFHLGDDLPCPAISKAVKTMRRGEKAELSVRFSYGFKQIGNEVTRTDGAIPPNSNLIICLELISWKSVIDIMGDKKVLKKIMKVGEGFDRPSEGSLAKVAYIGKLENGTVFERKGSREEPLELLCFEEQINEGLDRAIMTMRKGEQALVTIQADGHEVSGMVSANSLHHYEVELIDFTKERPFWKMENHEKLEACERKKHDGNMLFKAGKFWHASKKYEKEIYLE* | 399 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 11738049 | 11743239 | - | Vvi8g476 | Vvi8g476 | 790699 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi8g476 | 398 | Gene3D | - | 125 | 239 | IPR046357 | GO:0003755 | |
| Vvi8g476 | 398 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 267 | 351 | IPR001179 | GO:0003755 | |
| Vvi8g476 | 398 | Gene3D | - | 240 | 353 | IPR046357 | GO:0003755 | |
| Vvi8g476 | 398 | SUPERFAMILY | FKBP-like | 245 | 370 | - | - | |
| Vvi8g476 | 398 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 4 | 241 | - | - | |
| Vvi8g476 | 398 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 341 | 393 | - | - | |
| Vvi8g476 | 398 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 223 | 326 | - | - | |
| Vvi8g476 | 398 | Gene3D | Tetratricopeptide repeat domain | 354 | 398 | IPR011990 | GO:0005515 | |
| Vvi8g476 | 398 | Gene3D | - | 1 | 124 | IPR046357 | GO:0003755 | |
| Vvi8g476 | 398 | SUPERFAMILY | FKBP-like | 7 | 121 | - | - | |
| Vvi8g476 | 398 | SUPERFAMILY | FKBP-like | 125 | 238 | - | - | |
| Vvi8g476 | 398 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 264 | 348 | IPR001179 | GO:0003755 | |
| Vvi8g476 | 398 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 144 | 236 | IPR001179 | GO:0003755 | |
| Vvi8g476 | 398 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 32 | 118 | IPR001179 | GO:0003755 | |
| Vvi8g476 | 398 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 149 | 239 | IPR001179 | GO:0003755 | |
| Vvi8g476 | 398 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 4 | 241 | - | - | |
| Vvi8g476 | 398 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 341 | 393 | - | - | |
| Vvi8g476 | 398 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 223 | 326 | - | - | |
| Vvi8g476 | 398 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 33 | 121 | IPR001179 | GO:0003755 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi8g476 | - | - | vvi:100251687 | 809.675 |