Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g477 ATGGAGGGAAAAGGATGCCTAGGCAGTTTTTTTCAGAGGTGCAAGCCTTACATAGCAATGATCTCTCTGCAGTTCGGCTATGCCGGCATGAACATCATCACCAAAGTTTCCCTCAACCGTGGAATGAGTCACTATGTGCTAGTTGTCTATAGGCATGCTTTTGCTACTGCAGTTATAGCTCCTTTTGCTCTTGTCCTCGAAAGGAAAGTTAGGCCAAAGATTACCCTTCCAATTTTCCTGCAACTTTTTGTCTTGGGTCTCCTCGGGCCTGTGATTGATCAAAACTTTTACTACGCTGGTCTTAAATTCACATCACCCACTTTCTCCTGTGCCATGAGCAACATGCTCCCAGCTATGACATTTGTCATGGCGGTTCTTTGCAGGATGGAGAAGTTAGACATGAAGAAGTTTAGATGCCAAGCAAAGGTGGTGGGAACCGTGGTGACTGTGGCAGGGGCCATGTTGATGACATTATATAAGGGTCCTATTGTGGAGATGGTGTGGTCCAAGTACGTCCACCCTCACAATAGCAACGCAGCTGAAAACAGTGGAAGCAGTGACAAGGACTGGGTTAAGGGTTCAATTCTCCTGATCATTGCTACTTTTGCCTGGGCATCTTTCTTCATCCTACAGGCAATAACAATGAGGAGATACCAAGCTCACCTCTCACTCACATCGATTGTATGCTTTCTGGGCACACTACAATCCATTGCTGTTACATTTGTGATGGAGCACAGACCCTCTGCTTGGACCATTGGCTGGGATATGAACCTTCTTGCTGCTGCCTACGCTGGTATAGTTTCTTCAAGCATTGCATACTATGTCCAAGGATTGGTCATGCAGAAAAGAGGACCCGTCTTTGTGACTGCTTTTAGCCCTCTTATGATGATCATTGTGGCCATCATGGGCTCTTTCATCCTTGCTGAAAAGATCTTTCTTGGAGGTGTCATCGGCGCAGTACTCATAGTGGCCGGACTTTACTCCGTTCTATGGGGCAAGTACAAGGAATTCAAAGAGAAGGAGGCCGAAACCATCCCAGAAGCTATAAAGGGTGCAGGAGAAAATGGTGGAATGAAGACTGTAATGGAAGAGACTGAAGAAGACAACGACATTGAAATGCAGAAAAGCCAAGCTAATAAGCTGTCTACACCAGCTGTAGCCGTGCAATCTGTGGAGGCACCAAAGGCCTAA 1191 46.35 MEGKGCLGSFFQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFALVLERKVRPKITLPIFLQLFVLGLLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVLCRMEKLDMKKFRCQAKVVGTVVTVAGAMLMTLYKGPIVEMVWSKYVHPHNSNAAENSGSSDKDWVKGSILLIIATFAWASFFILQAITMRRYQAHLSLTSIVCFLGTLQSIAVTFVMEHRPSAWTIGWDMNLLAAAYAGIVSSSIAYYVQGLVMQKRGPVFVTAFSPLMMIIVAIMGSFILAEKIFLGGVIGAVLIVAGLYSVLWGKYKEFKEKEAETIPEAIKGAGENGGMKTVMEETEEDNDIEMQKSQANKLSTPAVAVQSVEAPKA* 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11754198 11756598 - Vvi8g477 Vvi8g477 790700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g477 396 PANTHER WAT1-RELATED PROTEIN 10 367 - -
Vvi8g477 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Vvi8g477 396 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Vvi8g477 396 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Vvi8g477 396 PANTHER WAT1-RELATED PROTEIN 10 367 IPR030184 GO:0016021|GO:0022857
Vvi8g477 396 MobiDBLite consensus disorder prediction 349 396 - -
Vvi8g477 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 334 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g477 - - vvi:100241372 771.926