Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g478 ATGGAAGCATTTGGGGTCTTTCCGACCAATCATGATGCAATTATACTATATTATTATTACCATAAAGTTAGTCGCCCTCAGATTCTGGAGGAGGTGTCCGGGTGGCTCAGAGTTTACCATGACAATTCTGTGGACCGGTCCTGGACCGGACCCCCAGAAGTGGAGTTCTTGATGAAGCCGGTTCCCTCCCACGAAGACTTCAAGGACGGCGTCGCAACTCGCGATGTTCTAATCGATCCAAACACCGCCGACTGGTACATGTACTACCACTTCTACGCATGGCTGGTGCGCTCCGTGCGGGCCGTTTGCGTCTCCGTCTACCTTCGGCTGGCTCCTGAGCATCGTCTTCCAGCGGCTTGTGATGACGCCTACGCGGCTTTCCTCTGGCTTCGCGACGTCGCTCGGGGCGAGATGTCGGAGTCGTGGTTAAACAGTTATGCTGATTTTGGGAGAGTGTTTTTTGTGGGGGACAGCACCGGCGGGAATATTGTCCACGACTTGGCTGCACGAGTTACTGGGTTGGAGTCAGAGCCGGTGAGGTTAGCCGGAGGGGTGGCGATACATCCCGGCTTCCTTCGAGCCGAACCGAGTAAGTCATTCTTGGAGCTGGCGGATAGCAAAGACCATCCAATTACGTGCCCAATGGGGGCTGAGGCGCCACCACTAGCCGGACTGAAACTGCCACCGATGCTGGTAGTGGTGGCGGAGAAGGATTTACTTCGGGACACAGAGCTAGAGTACTGTGAGGCCATGAAGGAGGCTGGGAAGGAAGTGGAAGTTATGATGAATCCGGGAATGGGTCATAGCTTCTACTTTAATAAGCTGGCGATCGAGGCTGATCCAGAGACAAAAGCTCAGGCGGAGCTGCTGATTGAAACGATCAAAAGTTTCATTACTAGGCAAAGAGATATAGAGGGTTTGAGTGATTGA 930 53.33 MEAFGVFPTNHDAIILYYYYHKVSRPQILEEVSGWLRVYHDNSVDRSWTGPPEVEFLMKPVPSHEDFKDGVATRDVLIDPNTADWYMYYHFYAWLVRSVRAVCVSVYLRLAPEHRLPAACDDAYAAFLWLRDVARGEMSESWLNSYADFGRVFFVGDSTGGNIVHDLAARVTGLESEPVRLAGGVAIHPGFLRAEPSKSFLELADSKDHPITCPMGAEAPPLAGLKLPPMLVVVAEKDLLRDTELEYCEAMKEAGKEVEVMMNPGMGHSFYFNKLAIEADPETKAQAELLIETIKSFITRQRDIEGLSD* 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11772946 11774152 + Vvi8g478 Vvi8g478 790701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g478 309 PANTHER CARBOXYLESTERASE 15-RELATED 82 206 - -
Vvi8g478 309 PANTHER CARBOXYLESTERASE 15-RELATED 24 81 - -
Vvi8g478 309 PANTHER CARBOXYLESTERASE 15-RELATED 205 299 - -
Vvi8g478 309 Gene3D alpha/beta hydrolase 29 299 IPR029058 -
Vvi8g478 309 PANTHER ARYLACETAMIDE DEACETYLASE 24 81 - -
Vvi8g478 309 PANTHER ARYLACETAMIDE DEACETYLASE 82 206 - -
Vvi8g478 309 PANTHER ARYLACETAMIDE DEACETYLASE 205 299 - -
Vvi8g478 309 Pfam alpha/beta hydrolase fold 200 271 IPR013094 GO:0016787
Vvi8g478 309 Pfam alpha/beta hydrolase fold 90 191 IPR013094 GO:0016787
Vvi8g478 309 SUPERFAMILY alpha/beta-Hydrolases 20 290 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g1078 Vvi8g478 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g478 - - vvi:100261922 548.125