Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g479 ATGGAACTCTTCTCTCTGCAGTTTCTCCTCTTCATCTTCCTCCTCTCTCTCTATTTCTATTCTTCAAAAACCAAACCCATCTCCACAGGCTTCAAAGCCTACCCTTTACTCGGAAGCATACCGGAATTCCTCAAAAATCGCCACCGCTTTCTCGACTGGACTACTGATGTCCTCAGCCGCTGCCCAACCAACACCAGCACTATCCGGCGTCCCGGAGGGATTCACGGCGTCATCACGGCAAATCCATTGAACGTCGAGCATATGCTCAAGACCAACTTCGAGAACTACCCGAAGGGCCCGCAATTTATATCCATTCTCGAAGATTTCCTCGGCCGAGGCATCTTCAACTCCGACGCTGATCTCTGGAAGGTTCAGAGGAAGACCGCCAGTTACGAATTCAACACCAAGTCCCTCCGAAATTTCGTTTTTGAGAGCGTGACCGTGGAGACTCAGACGAGGTTGGTCCCGATTTTGAAGAAAGCAGCAGAAACAGGACGTGTGTTAGATGTTCAGGACATTTTGGAGCGGTTCGCTTTTGATAACGTGTGTAAGTTGGCGTTCAACGTCGATCCGGCTTGTCTCGGAGGCGATGCCACAGCCGGCGGAGATTTTATGCGCGCCTTCGAGGACGCTGCAACGCTCAGCTCAGGAAGGTTCATGTATGCGTTTCAATCTATTTGGAAAATGGAGAAGTTCTTCAACATGAGAAAAGAGAAACGACTGAAGAAATCGATAGCCATTGTTCATGAATTTGCGGAGAAGATCATCCAATCCAGACTGGAGCAAAAAGCAGAAAACAAAGACCAAGATTTACTATCGCGGTTCGTCGGAAACTATGACAACTCGCCCGAATTTCTCCGAGATATCGTCGAGACAAATATATTAAAAGAGCTCGAAACAGTCCGGGCCCGAAACGGAAAAAGCATCGGCGACACCTATAATTTCGACGAGCTCCGGGAACTGCACTATCTGCACGCAGCCATATCCGAAACGATGCGATTGTACCCACCCAGCATATGGGGCAAAGACTGTCTGCAGTTCAAACCCGAAAGATGGCTGGAAAACGGTGTGTACCGTCAGGAAAACCCGTTTCGGTACCCGATATTTCATGCTGGGCCGAGAATGTGTCTGGGCAAGGACATGGCTTATATTCAGATGAAGTCGATTGCAGCATCGGTGATGGAGCAGTTTGAGGTGAAGGTAGAGGAGAAGGACAAGTGTCCTGAGCATTATTTATCACTGACGCTGAGGATGACAGGCGGGCTAGAAGTGAGAGTGAAGGAGAGATGTGTGGATTTAAATAAAATTAGCTCCGTTATTTTGAAAAATTCATTAGAGACCCCGTTATTTGGTTAA 1356 48.08 MELFSLQFLLFIFLLSLYFYSSKTKPISTGFKAYPLLGSIPEFLKNRHRFLDWTTDVLSRCPTNTSTIRRPGGIHGVITANPLNVEHMLKTNFENYPKGPQFISILEDFLGRGIFNSDADLWKVQRKTASYEFNTKSLRNFVFESVTVETQTRLVPILKKAAETGRVLDVQDILERFAFDNVCKLAFNVDPACLGGDATAGGDFMRAFEDAATLSSGRFMYAFQSIWKMEKFFNMRKEKRLKKSIAIVHEFAEKIIQSRLEQKAENKDQDLLSRFVGNYDNSPEFLRDIVETNILKELETVRARNGKSIGDTYNFDELRELHYLHAAISETMRLYPPSIWGKDCLQFKPERWLENGVYRQENPFRYPIFHAGPRMCLGKDMAYIQMKSIAASVMEQFEVKVEEKDKCPEHYLSLTLRMTGGLEVRVKERCVDLNKISSVILKNSLETPLFG* 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11777898 11779639 + Vvi8g479 Vvi8g479 790702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g479 451 Gene3D Cytochrome P450 293 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g479 451 PANTHER CYTOCHROME P450 338 432 - -
Vvi8g479 451 PANTHER CYTOCHROME P450 290 337 - -
Vvi8g479 451 PANTHER CYTOCHROME P450 19 301 - -
Vvi8g479 451 Pfam Cytochrome P450 31 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g479 451 Pfam Cytochrome P450 337 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g479 451 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Vvi8g479 451 PANTHER CYTOCHROME P450 94B3-LIKE 19 301 - -
Vvi8g479 451 PANTHER CYTOCHROME P450 94B3-LIKE 338 432 - -
Vvi8g479 451 PANTHER CYTOCHROME P450 94B3-LIKE 290 337 - -
Vvi8g479 451 SUPERFAMILY Cytochrome P450 18 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g479 451 Gene3D Cytochrome P450 340 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g479 451 Gene3D Cytochrome P450 20 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g479 - - vvi:100267102 816.994