Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g489 ATGGCAAGGGAAGAGGTGACACTGCTTGGGATGTGGGCAAGTCCTCTGGCTCTGAGAATTGAATGGGCCTTGAAATGCAAAGGAATTTGGTATAAATGCATAGACGAAGATCTCTTAAACAAGAGCCAACGCCTTCTCACTCACAATCCGATCCACAAGAAAATTCCAGTGCTTTTGCATGGAGGAAAATCCATCCCTGAATCACTCGTCATTCTTGAATACATTGATGAGACATGGAAACAGAATCCCTTGTTGCCAGAAGATCCATACGAAAGAGCCATGGCACGGTTTTGGGCTAAATTTGTGGACGAAAAGTGTTGGACTACAATACCTGGAGTCTTCGGAAACGAGAGGGGGGATGAGCAAGAAAAGTCGAAGGAAAAAGCAATAGAAGAACTCAGAATTCTGGAAAAACAACTTGAAGGGAAAAAGTTTTTTGGGGGAGAGTCAGTTGGGTTTTTGGATATCGTATGTGGTTGGATTGCATACTGGTTACCCTTTATTGAAGACATTACTGGTTTAAAGTTGGTTGATGAAACATCTTTCCCTGCTTTGAGCGCATGGTTCAAGGCCTATCTTAGCGTTCCGTGGGTGAAAGAGCTCTTACCACCTCCAGACAAATTACGTGCTCATCTTATAACTTTTCGCCAGAAACTCCTATCCTCACGGCTCTTGAATATCTGA 684 43.42 MAREEVTLLGMWASPLALRIEWALKCKGIWYKCIDEDLLNKSQRLLTHNPIHKKIPVLLHGGKSIPESLVILEYIDETWKQNPLLPEDPYERAMARFWAKFVDEKCWTTIPGVFGNERGDEQEKSKEKAIEELRILEKQLEGKKFFGGESVGFLDIVCGWIAYWLPFIEDITGLKLVDETSFPALSAWFKAYLSVPWVKELLPPPDKLRAHLITFRQKLLSSRLLNI* 228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 11923425 11925207 + Vvi8g489 Vvi8g489 790712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g489 227 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Vvi8g489 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Vvi8g489 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 220 IPR010987 -
Vvi8g489 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Vvi8g489 227 Coils Coil 119 139 - -
Vvi8g489 227 Pfam Glutathione S-transferase, C-terminal domain 120 194 IPR004046 -
Vvi8g489 227 CDD GST_N_Tau 6 79 - -
Vvi8g489 227 Gene3D - 85 222 - -
Vvi8g489 227 SFLD Glutathione Transferase (cytosolic) 2 222 IPR040079 -
Vvi8g489 227 SFLD Main.3: Omega- and Tau-like 2 222 IPR045073 -
Vvi8g489 227 SUPERFAMILY GST C-terminal domain-like 77 219 IPR036282 -
Vvi8g489 227 Gene3D Glutaredoxin 1 84 - -
Vvi8g489 227 PANTHER GLUTATHIONE S-TRANSFERASE ISOFORM X1-RELATED 1 216 - -
Vvi8g489 227 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Vvi8g489 227 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g489 K00799 - vvi:100262021 473.011