Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g570 | ATGATCTTCATCCTTGTTTACTGCACCGCCGGCATCTCTGGAGGGCATATTAATCCTGCAGTGACGTTCGGGCTATTCCTGGCTAGAAAGGTGTCGCTGGTCCGAGCCCTCGCCTCTGGATACAGTATAGGAACGGGGTTGGCTGCTGAGATTATTGGCACCTTCGTTCTTGTCTACACCGTCTTCTCTGCTACTGATCCCAAAAGAAATGCAAGAGATTCCCATGTGCCTGTTTTGGCACCACTCCCCATTGGATTTGCTGTGTTCATGGTTCACTTAGCCACGATCCCCATCACCGGTACCGGAATCAACCCGGCTCGAAGTCTCGGAGCTGCTGTCATCTACAACCAACCCAAAGCCTGGAGTGACCATTGGGTATTTTGGGCTGGACCCTTCATTGGTGCAGCCATTGCAGCATTCTATCACCAGTTCATATTGAGAGCTGGAGCTGTTAAAGCTCTAGGGTCTTTCAAGAGCAGTTCCCACATGTAA | 492 | 50.81 | MIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALASGYSIGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQPKAWSDHWVFWAGPFIGAAIAAFYHQFILRAGAVKALGSFKSSSHM* | 164 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 12986503 | 12988076 | + | Vvi8g570 | Vvi8g570 | 790793 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g570 | 163 | Gene3D | Glycerol uptake facilitator protein. | 1 | 36 | IPR023271 | - | |
Vvi8g570 | 163 | Gene3D | Glycerol uptake facilitator protein. | 37 | 163 | IPR023271 | - | |
Vvi8g570 | 163 | PANTHER | AQUAPORIN PIP2-1-RELATED | 36 | 160 | - | - | |
Vvi8g570 | 163 | PANTHER | AQUAPORIN PIP2-1-RELATED | 1 | 37 | - | - | |
Vvi8g570 | 163 | Pfam | Major intrinsic protein | 37 | 142 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g570 | 163 | PRINTS | Major intrinsic protein family signature | 49 | 67 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g570 | 163 | PRINTS | Major intrinsic protein family signature | 85 | 107 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g570 | 163 | PRINTS | Major intrinsic protein family signature | 125 | 145 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Vvi8g570 | 163 | SUPERFAMILY | Aquaporin-like | 2 | 147 | IPR023271 | - | |
Vvi8g570 | 163 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 36 | 160 | IPR034294 | - | |
Vvi8g570 | 163 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 1 | 37 | IPR034294 | - | |
Vvi8g570 | 163 | ProSitePatterns | MIP family signature. | 16 | 24 | IPR022357 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g570 | K09872 | - | vvi:100233094 | 298.516 |