Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g593 ATGGCGACTGGAAACAACTCCGTTCGCTCTCTGGAACACACCCCGACGTGGGCATTGGCGGTTGTCTGCTTCTTCTTCATAGCCATTTCCATTGTTCTTGAGCACTGTATCCATCTTCTCACCAACTGGCTTAAGAGACATCGGAAGACTGCGTTGTGCGATGCCGTGGACAGACTCAAATCCGAGCTGATGCTTCTGGGGTTCATGTCTCTACTACTAGCAGTAACTCAAGAGCCTATTTCCAAAATCTGCATACCACCCAAGTATGCTGACAAGATGCTTCCCTGTCGGCGACTGGTTGAAGATCAAAGTGCAAATACTACTGATCCTTGCACGTCTAAGGGTATGGTTTCTATAGTGACCCAAAAAGGGATCCAGCAGCTTCAAATCTTCATCTTTGTGCTGGCTGTCATGCAAATTGTTTATAGTGTTCTCACCATGGCTTTGGGCAGGCTTAAGATGAGACGTTGGAGTGCTTGGGAGAAAGAAACACAAACAACAGAGTACCTCGTTGCCAACGATCCTAATCGATTCAGATTCACGAGGCAAACAACTTTCGGAAGACGGCACATGTCTTCTTGTACAGAAACATCCCTTCAATTGTGGACAAAATGCTTCTTCAGACAGTTCTTTCGATCAGTGGTAAAGGTGGACTATATCACTCTGAGGCATGGTTTCATCTCGGCTCATTTGGCACCCAATAGCAACTTCAATTTCCAAAAGTACATACGACGATCACTGGACGAGGATTTCAAGGTCGTAGTCAGCATCAGCCCTCTGATGCGGTTTATTGTGGTTATCTTCTTGCTCCTAGACGTACATGGTTGGCATGTGTATCTCTGGGTGTCCTGCGTTCCTCTTTTGATAGTGCTGATTCTGGGAACCAAACTGGAAGTCATTGTGGAGAGAATGGCCCTTCAGCTAAAACATCAGAACTATGTAATCAAAGGAACTCCTCTGGTTAAGCCCAATGACAATCTCTTCTGGTTTGAGGACCCAAGATTTGTTCTGACTCTTATTCATTACACTCTTTTTACGAATGCATTCGAGCTGGCCTTCTTTATCTGGGTTTCAATAGAATTTGGGTGGGACTCTTGTTACCATGAGCACACGGTGATCACTGCCATAAGAGTGGCGTTGGCTGTGACAGTTCAAGTCCTTTGCAGCTATATTACACTTCCCCTGTATGCACTAGTGACACAGATGGGATCACAATACAAGGGTAAGGCACTGGAAGAGCAGACGGCCAAAATCATAAAGCAGTGGCACGCGGAGGTAAGGGAAAGGAGGAAGAGGCAAGAACAGTCGTTACAATCTCCTCGGACATCTTGGACGACAGAATGGAGCCCCAGGAGGAGTAGTGTGACTGAATCTTCATCGCTTCTACGACAATGTAGGCTAGGAGGAAGCCCTACTAGCAAAGGAGAAATCGTGGAGGTGGAAGAAGAAGAAAGTGTAAGAAACGAGGCTGCCTGGTCAAGGTTTCGGTCTATGGCACCCATGCTAGAATTGCCAGCAGTGAAGCGAGATGGGAGATGGAAAGAAAGAGAGTAG 1554 46.59 MATGNNSVRSLEHTPTWALAVVCFFFIAISIVLEHCIHLLTNWLKRHRKTALCDAVDRLKSELMLLGFMSLLLAVTQEPISKICIPPKYADKMLPCRRLVEDQSANTTDPCTSKGMVSIVTQKGIQQLQIFIFVLAVMQIVYSVLTMALGRLKMRRWSAWEKETQTTEYLVANDPNRFRFTRQTTFGRRHMSSCTETSLQLWTKCFFRQFFRSVVKVDYITLRHGFISAHLAPNSNFNFQKYIRRSLDEDFKVVVSISPLMRFIVVIFLLLDVHGWHVYLWVSCVPLLIVLILGTKLEVIVERMALQLKHQNYVIKGTPLVKPNDNLFWFEDPRFVLTLIHYTLFTNAFELAFFIWVSIEFGWDSCYHEHTVITAIRVALAVTVQVLCSYITLPLYALVTQMGSQYKGKALEEQTAKIIKQWHAEVRERRKRQEQSLQSPRTSWTTEWSPRRSSVTESSSLLRQCRLGGSPTSKGEIVEVEEEESVRNEAAWSRFRSMAPMLELPAVKRDGRWKERE* 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13301053 13305442 + Vvi8g593 Vvi8g593 790816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g593 517 MobiDBLite consensus disorder prediction 431 481 - -
Vvi8g593 517 MobiDBLite consensus disorder prediction 437 467 - -
Vvi8g593 517 Pfam Mlo family 105 454 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 Pfam Mlo family 9 105 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 1 2 104 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 1 98 487 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 2 104 - -
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 98 487 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g593 Vvi13g490 ECH
Vvi6g292 Vvi8g593 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g593 K08472 - vvi:100233062 1004.97