Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g593 ATGGCGACTGGAAACAACTCCGTTCGCTCTCTGGAACACACCCCGACGTGGGCATTGGCGGTTGTCTGCTTCTTCTTCATAGCCATTTCCATTGTTCTTGAGCACTGTATCCATCTTCTCACCAACTGGCTTAAGAGACATCGGAAGACTGCGTTGTGCGATGCCGTGGACAGACTCAAATCCGAGCTGATGCTTCTGGGGTTCATGTCTCTACTACTAGCAGTAACTCAAGAGCCTATTTCCAAAATCTGCATACCACCCAAGTATGCTGACAAGATGCTTCCCTGTCGGCGACTGGTTGAAGATCAAAGTGCAAATACTACTGATCCTTGCACGTCTAAGGGTATGGTTTCTATAGTGACCCAAAAAGGGATCCAGCAGCTTCAAATCTTCATCTTTGTGCTGGCTGTCATGCAAATTGTTTATAGTGTTCTCACCATGGCTTTGGGCAGGCTTAAGATGAGACGTTGGAGTGCTTGGGAGAAAGAAACACAAACAACAGAGTACCTCGTTGCCAACGATCCTAATCGATTCAGATTCACGAGGCAAACAACTTTCGGAAGACGGCACATGTCTTCTTGTACAGAAACATCCCTTCAATTGTGGACAAAATGCTTCTTCAGACAGTTCTTTCGATCAGTGGTAAAGGTGGACTATATCACTCTGAGGCATGGTTTCATCTCGGCTCATTTGGCACCCAATAGCAACTTCAATTTCCAAAAGTACATACGACGATCACTGGACGAGGATTTCAAGGTCGTAGTCAGCATCAGCCCTCTGATGCGGTTTATTGTGGTTATCTTCTTGCTCCTAGACGTACATGGTTGGCATGTGTATCTCTGGGTGTCCTGCGTTCCTCTTTTGATAGTGCTGATTCTGGGAACCAAACTGGAAGTCATTGTGGAGAGAATGGCCCTTCAGCTAAAACATCAGAACTATGTAATCAAAGGAACTCCTCTGGTTAAGCCCAATGACAATCTCTTCTGGTTTGAGGACCCAAGATTTGTTCTGACTCTTATTCATTACACTCTTTTTACGAATGCATTCGAGCTGGCCTTCTTTATCTGGGTTTCAATAGAATTTGGGTGGGACTCTTGTTACCATGAGCACACGGTGATCACTGCCATAAGAGTGGCGTTGGCTGTGACAGTTCAAGTCCTTTGCAGCTATATTACACTTCCCCTGTATGCACTAGTGACACAGATGGGATCACAATACAAGGGTAAGGCACTGGAAGAGCAGACGGCCAAAATCATAAAGCAGTGGCACGCGGAGGTAAGGGAAAGGAGGAAGAGGCAAGAACAGTCGTTACAATCTCCTCGGACATCTTGGACGACAGAATGGAGCCCCAGGAGGAGTAGTGTGACTGAATCTTCATCGCTTCTACGACAATGTAGGCTAGGAGGAAGCCCTACTAGCAAAGGAGAAATCGTGGAGGTGGAAGAAGAAGAAAGTGTAAGAAACGAGGCTGCCTGGTCAAGGTTTCGGTCTATGGCACCCATGCTAGAATTGCCAGCAGTGAAGCGAGATGGGAGATGGAAAGAAAGAGAGTAG 1554 46.59 MATGNNSVRSLEHTPTWALAVVCFFFIAISIVLEHCIHLLTNWLKRHRKTALCDAVDRLKSELMLLGFMSLLLAVTQEPISKICIPPKYADKMLPCRRLVEDQSANTTDPCTSKGMVSIVTQKGIQQLQIFIFVLAVMQIVYSVLTMALGRLKMRRWSAWEKETQTTEYLVANDPNRFRFTRQTTFGRRHMSSCTETSLQLWTKCFFRQFFRSVVKVDYITLRHGFISAHLAPNSNFNFQKYIRRSLDEDFKVVVSISPLMRFIVVIFLLLDVHGWHVYLWVSCVPLLIVLILGTKLEVIVERMALQLKHQNYVIKGTPLVKPNDNLFWFEDPRFVLTLIHYTLFTNAFELAFFIWVSIEFGWDSCYHEHTVITAIRVALAVTVQVLCSYITLPLYALVTQMGSQYKGKALEEQTAKIIKQWHAEVRERRKRQEQSLQSPRTSWTTEWSPRRSSVTESSSLLRQCRLGGSPTSKGEIVEVEEEESVRNEAAWSRFRSMAPMLELPAVKRDGRWKERE* 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13301053 13305442 + Vvi8g593 Vvi8g593 790816

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g593 517 MobiDBLite consensus disorder prediction 431 481 - -
Vvi8g593 517 MobiDBLite consensus disorder prediction 437 467 - -
Vvi8g593 517 Pfam Mlo family 105 454 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 Pfam Mlo family 9 105 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 1 2 104 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 1 98 487 IPR004326 GO:0006952|GO:0016021
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 2 104 - -
Vvi8g593 517 PANTHER MLO-LIKE PROTEIN 98 487 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g593 K08472 MLO; mlo protein - vvi:100233062 1004.97
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Vvi8g593 Vvi13g490 ECH
Vvi6g292 Vvi8g593 ECH
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g593 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone3ag0284 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Vvi19g246 . 3 519 MLO family AT5G53760 66.4 1.3e-203 706.4
Vvi6g292 ECH 6 466 MLO family AT3G45290 60.3 1.9e-150 529.6
Vvi8g593 ECH 7 442 MLO family AT3G45290 58.1 6.2e-146 514.6
Vvi19g246 . 3 523 MLO family AT1G26700 65.7 1.2e-198 689.9
Vvi8g592 ECH 6 541 MLO family AT2G39200 63.4 3.9e-189 658.3
Vvi13g490 ECH 5 464 MLO family AT2G39200 65.8 3.3e-188 655.2
Vvi6g290 ECH 8 540 MLO family AT2G39200 62.5 2.0e-185 646.0
Vvi13g491 ECH 5 463 MLO family AT2G39200 63.7 2.2e-179 625.9
Vvi6g292 ECH 8 466 MLO family AT2G39200 50.9 5.2e-133 471.9
Vvi18g64 ECH 7 451 MLO family AT2G39200 50.6 2.9e-123 439.5
Vvi8g592 ECH 1 408 MLO family AT1G61560 67.5 2.3e-159 558.9
Vvi13g490 ECH 1 377 MLO family AT1G61560 65.3 5.4e-156 547.7
Vvi6g290 ECH 1 413 MLO family AT1G61560 66.0 1.3e-154 543.1
Vvi13g491 ECH 1 377 MLO family AT1G61560 62.0 8.6e-146 513.8
Vvi7g1219 ECH 13 404 MLO family AT1G61560 51.0 2.3e-114 409.5
Vvi18g64 ECH 9 399 MLO family AT1G61560 51.7 2.4e-111 399.4
Vvi7g1219 ECH 5 477 MLO family AT2G17430 65.7 3.3e-177 618.6
Vvi18g64 ECH 9 472 MLO family AT2G17430 60.7 8.6e-154 540.8
Vvi18g66 ECH 3 432 MLO family AT2G17430 52.7 1.1e-124 444.1
Vvi8g592 ECH 5 450 MLO family AT2G17430 51.3 3.0e-122 436.0
Vvi6g290 ECH 5 455 MLO family AT2G17430 50.4 2.1e-120 429.9
Vvi7g1219 ECH 13 559 MLO family AT2G17480 65.0 5.3e-197 684.5
Vvi18g64 ECH 9 471 MLO family AT2G17480 60.6 2.2e-158 556.2
Vvi8g592 ECH 8 455 MLO family AT2G17480 51.0 6.8e-120 428.3
Vvi7g1219 ECH 13 369 MLO family AT1G42560 60.5 1.6e-122 436.4
Vvi18g64 ECH 9 363 MLO family AT1G42560 60.4 4.0e-121 431.8
Vvi8g592 ECH 8 373 MLO family AT1G42560 51.1 1.2e-98 357.1
Vvi12g1259 . 1 398 MLO family AT4G24250 61.7 1.3e-133 473.4
Vvi5g1421 . 1 406 MLO family AT4G24250 53.8 1.0e-114 410.6
Vvi7g1219 ECH 5 369 MLO family AT5G65970 70.4 1.3e-148 523.5
Vvi18g64 ECH 4 363 MLO family AT5G65970 61.4 5.9e-122 434.9
Vvi8g592 ECH 2 373 MLO family AT5G65970 51.2 3.0e-102 369.4
Vvi18g66 ECH 2 348 MLO family AT5G65970 53.2 1.7e-100 363.6
Vvi18g64 ECH 4 499 MLO family AT2G33670 63.1 9.4e-171 597.0
Vvi7g1219 ECH 6 452 MLO family AT2G33670 65.2 9.1e-166 580.5
Vvi8g592 ECH 4 455 MLO family AT2G33670 53.1 2.3e-132 469.5
Vvi6g290 ECH 6 460 MLO family AT2G33670 50.8 1.2e-128 457.2
Vvi13g490 ECH 63 467 MLO family AT1G11310 63.5 7.6e-160 560.8
Vvi6g290 ECH 63 529 MLO family AT1G11310 61.0 6.4e-159 557.8
Vvi8g592 ECH 63 494 MLO family AT1G11310 64.8 8.4e-159 557.4
Vvi13g491 ECH 63 466 MLO family AT1G11310 60.2 6.0e-149 524.6
Vvi12g240 ECH 61 459 MLO family AT1G11310 50.9 6.7e-108 388.3
Vvi5g1421 . 5 479 MLO family AT2G44110 61.2 4.3e-160 561.6
Vvi12g1259 . 8 440 MLO family AT2G44110 52.8 2.7e-122 436.0
Vvi5g1421 . 8 469 MLO family AT4G02600 66.5 4.1e-177 618.2
Vvi12g1259 . 5 440 MLO family AT4G02600 57.3 1.7e-138 490.0
Vvi12g1097 . 1 545 MLO family AT1G11000 68.1 3.9e-205 711.4
Vvi4g1131 . 7 467 MLO family AT1G11000 52.7 7.0e-130 461.5
Vvi5g1421 . 8 469 MLO family AT4G02600 66.5 4.1e-177 618.2
Vvi12g1259 . 5 440 MLO family AT4G02600 57.3 1.7e-138 490.0
Vvi13g490 ECH 63 467 MLO family AT1G11310 63.5 7.6e-160 560.8
Vvi6g290 ECH 63 529 MLO family AT1G11310 61.0 6.4e-159 557.8
Vvi8g592 ECH 63 494 MLO family AT1G11310 64.8 8.4e-159 557.4
Vvi13g491 ECH 63 466 MLO family AT1G11310 60.2 6.0e-149 524.6
Vvi12g240 ECH 61 459 MLO family AT1G11310 50.9 6.7e-108 388.3
Vvi6g292 ECH 6 466 MLO family AT3G45290 60.3 1.9e-150 529.6
Vvi8g593 ECH 7 442 MLO family AT3G45290 58.1 6.2e-146 514.6
Vvi12g1097 . 1 545 MLO family AT1G11000 68.1 3.9e-205 711.4
Vvi4g1131 . 7 467 MLO family AT1G11000 52.7 7.0e-130 461.5
Vvi18g64 ECH 4 499 MLO family AT2G33670 63.1 9.4e-171 597.0
Vvi7g1219 ECH 6 452 MLO family AT2G33670 65.2 9.1e-166 580.5
Vvi8g592 ECH 4 455 MLO family AT2G33670 53.1 2.3e-132 469.5
Vvi6g290 ECH 6 460 MLO family AT2G33670 50.8 1.2e-128 457.2
Vvi8g592 ECH 1 408 MLO family AT1G61560 67.5 2.3e-159 558.9
Vvi13g490 ECH 1 377 MLO family AT1G61560 65.3 5.4e-156 547.7
Vvi6g290 ECH 1 413 MLO family AT1G61560 66.0 1.3e-154 543.1
Vvi13g491 ECH 1 377 MLO family AT1G61560 62.0 8.6e-146 513.8
Vvi7g1219 ECH 13 404 MLO family AT1G61560 51.0 2.3e-114 409.5
Vvi18g64 ECH 9 399 MLO family AT1G61560 51.7 2.4e-111 399.4
Vvi7g1219 ECH 5 477 MLO family AT2G17430 65.7 3.3e-177 618.6
Vvi18g64 ECH 9 472 MLO family AT2G17430 60.7 8.6e-154 540.8
Vvi18g66 ECH 3 432 MLO family AT2G17430 52.7 1.1e-124 444.1
Vvi8g592 ECH 5 450 MLO family AT2G17430 51.3 3.0e-122 436.0
Vvi6g290 ECH 5 455 MLO family AT2G17430 50.4 2.1e-120 429.9
Vvi7g1219 ECH 13 559 MLO family AT2G17480 65.0 5.3e-197 684.5
Vvi18g64 ECH 9 471 MLO family AT2G17480 60.6 2.2e-158 556.2
Vvi8g592 ECH 8 455 MLO family AT2G17480 51.0 6.8e-120 428.3
Vvi7g1219 ECH 13 369 MLO family AT1G42560 60.5 1.6e-122 436.4
Vvi18g64 ECH 9 363 MLO family AT1G42560 60.4 4.0e-121 431.8
Vvi8g592 ECH 8 373 MLO family AT1G42560 51.1 1.2e-98 357.1
Vvi7g1219 ECH 5 369 MLO family AT5G65970 70.4 1.3e-148 523.5
Vvi18g64 ECH 4 363 MLO family AT5G65970 61.4 5.9e-122 434.9
Vvi8g592 ECH 2 373 MLO family AT5G65970 51.2 3.0e-102 369.4
Vvi18g66 ECH 2 348 MLO family AT5G65970 53.2 1.7e-100 363.6
Vvi19g246 . 3 519 MLO family AT5G53760 66.4 1.3e-203 706.4
Vvi8g592 ECH 6 541 MLO family AT2G39200 63.4 3.9e-189 658.3
Vvi13g490 ECH 5 464 MLO family AT2G39200 65.8 3.3e-188 655.2
Vvi6g290 ECH 8 540 MLO family AT2G39200 62.5 2.0e-185 646.0
Vvi13g491 ECH 5 463 MLO family AT2G39200 63.7 2.2e-179 625.9
Vvi6g292 ECH 8 466 MLO family AT2G39200 50.9 5.2e-133 471.9
Vvi18g64 ECH 7 451 MLO family AT2G39200 50.6 2.9e-123 439.5
Vvi12g1259 . 1 398 MLO family AT4G24250 61.7 1.3e-133 473.4
Vvi5g1421 . 1 406 MLO family AT4G24250 53.8 1.0e-114 410.6
Vvi19g246 . 3 523 MLO family AT1G26700 65.7 1.2e-198 689.9
Vvi5g1421 . 5 479 MLO family AT2G44110 61.2 4.3e-160 561.6
Vvi12g1259 . 8 440 MLO family AT2G44110 52.8 2.7e-122 436.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010176 3 1 1 1 2 0 2 1 1 1 0 0 0 1 1 1 1 2 2 0 1 1 1 1 1 1 1 1 1 2 32