Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g595 ATGGCCCGCAACAGGCGTCAACTTAGTGACCCCGGCATCACCTTTCTGTTTCTGGCGTTACTCTTACACTTCTACTCTGGCACAAGTGTTCTCCAGCTAAATTATTACTCAGAGAGCTGCCCCAGAGCCGAAGAGATCATCAAACAGCAAGTCGTCAACCTCTACCATAAGCATGGAAACACAGCTGTTTCATGGATTAGAAATCTTTTCCACGATTGCATGGTTAAGTCATGCGATGCCTCGCTCTTGCTGGAGACAGCGAGGGGCGTAGAGTCGGAGAAGCTTTCTTCCAGGAGCTTTGGGATGAGAAATTTCAAGTACATCGACACAATAAAAAAGGCTGTCGAGAGTGAGTGCCCACAGACGGTTTCCTGTGCTGATATTGTGGTCCTTTCTGCAAGAGATGGCTTTGAGTTGTTAGGAGGACCATACATTGAAATGAAGACCGGGCGACGAGACAGCAAGGAAAGCTATGCAACAGTGGTAGAAGACTCCATCCCTAATCACAATGATTCCATGTCATTAGTCCTCTCCCGCTTTCAATCCATTGGCATCGATGCCGAAGGGACTGTTGCGCTTTTAGGAGCTCACTCAGTTGGTCGAGTACACTGTGTGAATGTCGTAAATAGGCTCTACCCCACAGTGGACCCAACCTTGGATCCTGAGTATGCTGAATACCTTGAACGCCGGTGCCCTTCGCCGGAACCTGACCCAAAGGCAGTGCAGTATGCAAGGAACGATCTAGAAACGCCAATGGTGCTTGATAATATGTATTACAAGAACATTTTGAGCCACAAGGGACTACTATTAGTTGATCAACAACTCGTTTCAGACCCAACTACATCTCCCTTTGTGGAGAAGATGGCTGATGACAATGGCTACTTCCATGACCAGTTCTCTAGGGCTCTGCTCTTGTTATCTGAGAATAACCCTCTTACCGGAGACGACGGAGAGATTAGGAAGGACTGCCGCTATGTGAATGTATAG 987 47.72 MARNRRQLSDPGITFLFLALLLHFYSGTSVLQLNYYSESCPRAEEIIKQQVVNLYHKHGNTAVSWIRNLFHDCMVKSCDASLLLETARGVESEKLSSRSFGMRNFKYIDTIKKAVESECPQTVSCADIVVLSARDGFELLGGPYIEMKTGRRDSKESYATVVEDSIPNHNDSMSLVLSRFQSIGIDAEGTVALLGAHSVGRVHCVNVVNRLYPTVDPTLDPEYAEYLERRCPSPEPDPKAVQYARNDLETPMVLDNMYYKNILSHKGLLLVDQQLVSDPTTSPFVEKMADDNGYFHDQFSRALLLLSENNPLTGDDGEIRKDCRYVNV* 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13311734 13313191 + Vvi8g595 Vvi8g595 790818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g595 328 Gene3D - 34 327 - -
Vvi8g595 328 PANTHER PEROXIDASE 21 19 325 - -
Vvi8g595 328 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 Gene3D Peroxidase, domain 2 167 306 - -
Vvi8g595 328 PANTHER PEROXIDASE 25-RELATED 19 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 Pfam Peroxidase 48 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 ProSiteProfiles Plant heme peroxidase family profile. 30 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g595 328 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
Vvi8g595 328 SUPERFAMILY Heme-dependent peroxidases 31 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g595 K00430 - vvi:100256842 664.07