Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g606 ATGGGGAGGAAAGGGAACTGGCTTTCTTCCGTAAAGAAGGCTCTCAGCCCAGAACCCAAGGAGAAGAAGGACCAGAGAGCAGATAAATCCAAGAAGAAATGGTTTGGGAAGCACAAATATCCAGATCCTAATCCTTCCTCTTTAGAAACTGTTCCAGGGCCTTCTCTTGCTCCTCCTGAAGAGGTGAAAACAATCGAACCTGATAATGAACATCACAAGCATGTTTACTCTGTTGCAGCCACAACTACCATGGCTTCCCTTGATGTTCCTGAGACTGATGTGGAGGTTGTTGAAATCACCACTCTGACTCAGTCAACGGGAAAAGCAAAAGAGGAAGCAGCAGCAATCAAGATTCAAACAGCATTCCGAGGTTATTTGGCAAGGAGGGCATTACGGGCTTTAAGAGGGCTGGTCAGGTTGCAATCACTGATACAAGGGACCGCTGTTAAACGCCAAGCTGCAAACACTCTACGGTGCATGCAAACTCTTGCTCGTGTGCAGTCTCAGATCTGTTATAGGAGGATCAGGATGTCTGAGGAGAATCAGGCTCTCCAGAGACAACTCCTACAGAAACAGGCAAAAGAGTTTGAGCAGTTGAAGATGGGGGAGGAATGGGATGACAGCCTACAATCAAAAGAACAAATTGAAGCAGGCCTATTAAACAAGCAAGGGGCAGCAATGAGAAGAGAAAGGGCACTGGCTTATGCATTTTCTCATCAGCAAGCGTGGAAGAATTCTTCAAAGTCCACAAACCTATTGTTCATGGATCCAAGCAACCCCCATTGGGGTTGGAGCTGGTTGGAACGATGGATGGCGGCCCGGCCATGGGAGAGCCGCAGCACAACAGATAAAGAACTCAATAACGACCAATTATCCATAAAAACCAAAAACCATACCATCCTCCTGCCCGCCAAGCATGGTCAGCATTCAGTCGGAGCGGTTTCGGAGGCATAG 954 47.69 MGRKGNWLSSVKKALSPEPKEKKDQRADKSKKKWFGKHKYPDPNPSSLETVPGPSLAPPEEVKTIEPDNEHHKHVYSVAATTTMASLDVPETDVEVVEITTLTQSTGKAKEEAAAIKIQTAFRGYLARRALRALRGLVRLQSLIQGTAVKRQAANTLRCMQTLARVQSQICYRRIRMSEENQALQRQLLQKQAKEFEQLKMGEEWDDSLQSKEQIEAGLLNKQGAAMRRERALAYAFSHQQAWKNSSKSTNLLFMDPSNPHWGWSWLERWMAARPWESRSTTDKELNNDQLSIKTKNHTILLPAKHGQHSVGAVSEA* 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13435572 13441098 + Vvi8g606 Vvi8g606 790829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g606 317 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 300 - -
Vvi8g606 317 MobiDBLite consensus disorder prediction 15 39 - -
Vvi8g606 317 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Vvi8g606 317 Coils Coil 174 194 - -
Vvi8g606 317 SMART iq_5 110 132 IPR000048 GO:0005515
Vvi8g606 317 PANTHER IQ-DOMAIN 5-RELATED 1 300 - -
Vvi8g606 317 Pfam IQ calmodulin-binding motif 113 132 IPR000048 GO:0005515
Vvi8g606 317 MobiDBLite consensus disorder prediction 1 66 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g606 Vvi13g474 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g606 - - vvi:100255106 548.51