Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g620 ATGGAAAATGAAATATCAAGCAAGAGTACATACAGACTCCTATATAGGGTTAAGCCTTTCTTAGCTGTTACCTTCTTGCAATTTGGATTTGCAGGGATGGATGTCTTTTCTAAGGTTGCATTGAACCAGGGGGTGAGCAACTATGTGCTAGTTGTCTACCGCCATGCAATCGCCACAGCCTTCATTGCTCCTTTTGCAAAAACTGAATACAAAATTCATTTTTTCAACAGGAAAGTACGACCAAAGATGACTTTCTCAATCTTCACCAAACTAATGCTGCTCAGCTTATTGGAGCCAGTTATTGACCAAAATTTGTATTATTTCGGGTTGAAGTACACAACAGCAACATTTGCAGCCGCTATGTACAACATTCTTCCAGCCATAACCTTTTTAATGGCTTGCATCTTTGGGCTTGAGAAGGTAACACTTAAGAGTATCCACAGCCAAGCTAAGGTGGTTGGTACTGTAGCAACTGTTGCAGGAGCTATGCTCATGACACTGGTAAAAGGCCCAGTTATTGAGTTGATTTGGACAAAAGGAAGAAACAACCAAGGGGTTAAAGGTGGTGGAACAAATATTCACGACTCAATCAAGGGTTCCCTCATGATCACAGCCGGCTGCTTCAGCTGGGCTTGTTTCATAATTCTACAAGCGATCACGCTAAAAACATACCCGGCTGAGCTTTCTCTCACTGCTTGGATATGCCTGTTGGGCACAGCACAAGGCACCATAGTGGCACTTGTTATGGAACGGGGAAAAACTAGTGTCTGGTCTATACACTGGGACACTAAATTCCTGGCAGCTCTATACAGTGGCATAGTCTGTTCAGGGCTAGCTTATTACATTCAAGGAGTAGTAATGAAAGACAGGGGACCGGTTTTTGTGACTGCTTTCAATCCACTAAGCATGATAATTGTTGCTGTCATGAGCTCTTTCATTTTGGCTGAACAAATGTACTTGGGAAGGGTAATCGGTGCCATTGTCATAGTAGCTGGCCTATACTTTGTCGTGTGGGGTAAAAGCAAGGAGTACAAATCTGGATCCCCCTCAACAGATGGACAAATGGTCCAAGACAAACAAATGACAGACGCAAGCAGTGATAGCAATGAAAATTCTACTCCTGAGCATAGCTCACAAGCCAATTCAATATGA 1152 42.97 MENEISSKSTYRLLYRVKPFLAVTFLQFGFAGMDVFSKVALNQGVSNYVLVVYRHAIATAFIAPFAKTEYKIHFFNRKVRPKMTFSIFTKLMLLSLLEPVIDQNLYYFGLKYTTATFAAAMYNILPAITFLMACIFGLEKVTLKSIHSQAKVVGTVATVAGAMLMTLVKGPVIELIWTKGRNNQGVKGGGTNIHDSIKGSLMITAGCFSWACFIILQAITLKTYPAELSLTAWICLLGTAQGTIVALVMERGKTSVWSIHWDTKFLAALYSGIVCSGLAYYIQGVVMKDRGPVFVTAFNPLSMIIVAVMSSFILAEQMYLGRVIGAIVIVAGLYFVVWGKSKEYKSGSPSTDGQMVQDKQMTDASSDSNENSTPEHSSQANSI* 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13548848 13554558 + Vvi8g620 Vvi8g620 790843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g620 383 PANTHER WAT1-RELATED PROTEIN 14 362 IPR030184 GO:0016021|GO:0022857
Vvi8g620 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 342 - -
Vvi8g620 383 PANTHER WAT1-RELATED PROTEIN 14 362 - -
Vvi8g620 383 Pfam EamA-like transporter family 28 166 IPR000620 GO:0016020|GO:0016021
Vvi8g620 383 Pfam EamA-like transporter family 198 337 IPR000620 GO:0016020|GO:0016021
Vvi8g620 383 MobiDBLite consensus disorder prediction 344 383 - -
Vvi8g620 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 167 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g620 Vvi13g256 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g620 - - vvi:100246483 706.827