Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g639 ATGGAGGGGGCCAACCAAACAAATAACACTACATATGCAAAACAAAAGAATAGTGTACAAAAACCAATGATAGATTCAGTGCCCGCGGAAGCGGCCCTCTTCCTCTATTTAACTCCTCCCCCACCCCTCCTCCAACCTAGTCTAAACTCAACAAATACAGCCCCAACACACAATCACAAAGCCAACAAGAAAATCATACCTGATCAGTCGGGGTCTAGCTTTCCCCCAATGCCGAGAAAAGGAATGAGGAGCTTCTTCTTTTCACACAAAGCCGATTCGTCCTCCGCGTCTCACTGCCCTTCACCGTCCCGATCGACAGCCACTCCTTCGATCCCTCGGAGAAGCATTTCCGATGCAGCAATGGCGAAGGGTGTTGAAGAGGCAGAGGCCATGATTATGAAATGGGACGCGGATACTTCAGCCTATGCTAAAGTCACTTCTATCTTTTACGAGAGCAAAAAAGAAGCCCATGATTTTATCAAATGCGTCAATGACTTACAGAAGGCAATGCATTTCATGGTGTCCGAGAACTCCAGCTCCGAGATGGTGGTGCGTGCCCAGCGCTTGATGCAAATTGCCATGAAGAGGCTTCAGAAGGAATTCTATCAGATTCTTTCTACCAACCGCGCTTACTTGGACCCGGAGTCCGTGTCCACTCGATCATCACGTTTGTCAGCAAGATCTAGCACGTCTGACTATGACGATGATGTCGAACAAGTATCTAGTAATGCAATGGATGATCTGAGATCCATAGCCGAATGCATGATCTCGTCCGGCTATGGCAAAGAGTGCGTACGCATATACAAAATTATCCGCAAGTCTATAGTGGACGAAGGAATATATCGTCTTGGAGTCGAAAAATTAAGTTCTTCGCAGATTCATAAGATGGATTGGGAAATCGTGGAGTTGAAGATCAAGAATTGGCTGGAGGGTATTAAGATATCTATAACAACACTCTTCACTGGGGAGAGAATCCTTTGCGATCATGTCTTCGCGGCATCTGACTCCATGCGTGAGTCTTGTTTTGCGGAAATCTCAAAAGAAGGAGCGACTCTTCTGTTTGAATTCCCTAGACTGCTCGTATCGAAAAGTAAGAGATCCCCGGATATGGCGTTCCGTACACTCGACGTGTACACGGCGATATCTGATAATTGGCCGGATATTGAATCGATATTCTCCTTCGAGTCCACTTCTTCTGTTCGTTTACACGCTCTCACCACGCTCAGCAAACTTGGAGAATCAGTACGGATGATGTTGTCCGAGTTCGAATCGGTGATTCAAAAGGACTCGTCCAAATCGCCAGTTGCAGGCGGAGGACTCCATCCTTTGACTCAATACGTGATGAATTACTTGTCTCACCTTGCCGACTATAGCAGCATTCTTGGCGACATCATTGGCGATTCTCCACCGCCAGTTCAGTCGCCTTTGCCGGAGTTCTACTTCGAAAGTTCAGACACCGACAACACTCCGGCGCCAGCCATCTCCGTTCGATTGGCTTGGATTATACTTTTCCTTCTCTGCAAGCTGGATGGCAAAGCAAAGCAGTACAAAGAGGTGTCTTTATCGTATCTCTTCTTAGCGAACAATCTTCAACACGTCGTTTCAAAAGTCCGTACATCGAATCTCCGGTACCTCCTCGGAGACGAGTGGATCTCCATGCATGAATCTAAGCTGAGACAGTTTGCCGCCAACTACGAACGGTTAGGTTGGGGCCACGTCATATCGTCAATGCCGGAGAACCCTAAGGCTGCCATTTCGCCGGAGGAAGCCAAGGAAACTTTCCGGAAATTCAATTTGGAGTTTGAACAAGCGTATCGGAAGCAATCCTCTTATATCGTACCAGACCCGAAACTTCGAGACGAAATAAAAGCTTCCATCGCCAGGAAACTCGACTCGGTGTATCAGGAGTTCTACGAGACCCATCGTGAGACACTGGCCACCATACGAAATGCAGAGATGCTTATCAGATTTGCCCCCGAAGATGTGAGAAATTGCTTATCGGATCTATTTTACGGCACGGGTTCGGGAGATTCTATGACGTTCGCATATTTAATTTCATCATGA 2064 47.14 MEGANQTNNTTYAKQKNSVQKPMIDSVPAEAALFLYLTPPPPLLQPSLNSTNTAPTHNHKANKKIIPDQSGSSFPPMPRKGMRSFFFSHKADSSSASHCPSPSRSTATPSIPRRSISDAAMAKGVEEAEAMIMKWDADTSAYAKVTSIFYESKKEAHDFIKCVNDLQKAMHFMVSENSSSEMVVRAQRLMQIAMKRLQKEFYQILSTNRAYLDPESVSTRSSRLSARSSTSDYDDDVEQVSSNAMDDLRSIAECMISSGYGKECVRIYKIIRKSIVDEGIYRLGVEKLSSSQIHKMDWEIVELKIKNWLEGIKISITTLFTGERILCDHVFAASDSMRESCFAEISKEGATLLFEFPRLLVSKSKRSPDMAFRTLDVYTAISDNWPDIESIFSFESTSSVRLHALTTLSKLGESVRMMLSEFESVIQKDSSKSPVAGGGLHPLTQYVMNYLSHLADYSSILGDIIGDSPPPVQSPLPEFYFESSDTDNTPAPAISVRLAWIILFLLCKLDGKAKQYKEVSLSYLFLANNLQHVVSKVRTSNLRYLLGDEWISMHESKLRQFAANYERLGWGHVISSMPENPKAAISPEEAKETFRKFNLEFEQAYRKQSSYIVPDPKLRDEIKASIARKLDSVYQEFYETHRETLATIRNAEMLIRFAPEDVRNCLSDLFYGTGSGDSMTFAYLISS* 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13768898 13771838 + Vvi8g639 Vvi8g639 790862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g639 687 MobiDBLite consensus disorder prediction 46 78 - -
Vvi8g639 687 MobiDBLite consensus disorder prediction 93 113 - -
Vvi8g639 687 SUPERFAMILY Cullin repeat-like 124 670 IPR016159 -
Vvi8g639 687 MobiDBLite consensus disorder prediction 1 21 - -
Vvi8g639 687 Gene3D Exocyst complex component Exo70 132 678 - -
Vvi8g639 687 PANTHER EXOCYST COMPLEX PROTEIN EXO70 81 680 IPR004140 GO:0000145|GO:0006887
Vvi8g639 687 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 81 680 - -
Vvi8g639 687 MobiDBLite consensus disorder prediction 47 69 - -
Vvi8g639 687 Pfam Exo70 exocyst complex subunit 306 668 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g639 K07195 - vvi:100267121 1243.41