Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g668 ATGGAGATTAAAGAGTCTGAGAGGATAGTTGTAGCTAAACCAGTTGCTTCAAGGCCTACCTGTTCCAGTTTTAGGTCTTTCTCTGAGCTCCTTGCAGGTGCCATCAATGCCTCGCCCCCAACCCCATGTCCTGAAACTTCTTTTGCTGCCATTAGACCAAAGACAGTGAGGTTCAAACCTGTGGCAAACCGTGCTCCAATTGGGGTGGTTTCTTCCCAGGCTCAAGTATCTGGAACAGAAGTTTGTAATTCATCTGATAAGGTTTTGAAATCAGACAGCAAACCCACTGTGGTATACAAGCCCTTGGCAAAGCTTGTATCAAAGACAACTGTTTCTCTGCTAGCAAATCTGGGGAGCTCCAATATGAGCCACCAGCAAACACTAGCACAGGTGGAGGCCCGTGTTCAACCTCCAAACCAAGATAGACAACATTCCAGACCTCACCTTAGCTCAAATCTACATCAGACTTTTCCATCTCAAGAAGAAACAGATAGAACAAGCGAGCCCTCTAAGACAGCATCACAGAATCTGGAAGAAGATCAGAAACCTTTGCTGCCCTCAAGCAATGGGGACCGACCTTCCTATGATGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTCAAAGGAAGTGAGTATCCCAGAAGCTACTACAAGTGCACATACCCAAGTTGTCCTGTGAAGAAGAAGGTAGAAAGATCATTGGATGGGCAGATAGCAGAAATTGTCTACAAAGGTGAGCACAATCATTCAAAACCTCAACCTCCTAAACGCAATTCATCAGGGACTCTGGGGCAGGGATTTGTATCTGATGGAACTGGCAAAGCTCCACTAAATTATGATTCTGGTACAACTGGAGCATTAAAGGCAGGTGGTGGTACTCCAGATAATTCTTGTGGTCTTAGTGGAGATTGTGAGGAAGGAAGCAAGGGATTGGAGCCAGAGGAAGATGAACCCAGGAGTAAGAGAAGGAAAAGTGAGAATCAATCCAGTGAAACAGTCATTGTAGGGGAAGGTGCACAAGAACCACGTATTGTTGTGCAAAATTCTACAGATTCTGAGATTCTGGGTGATGGCTTTCGCTGGAGAAAATATGGCCAGAAGGTTGTGAAGGGAAATTCATATCCCAGGAGTTACTATAGATGCACCAGTCTCAAGTGCAATGTGCGCAAGCATGTGGAAAGAGCATCAGAGGACCCAGGGTCATTTATCACAACATACGAGGGAAAACATAACCATGATATGCCAACCAGGAATACAAATGCAGCAACCTCTGAACCAGATATGCAGGCCCATACGAATAAAGAGAAACCATGA 1317 44.95 MEIKESERIVVAKPVASRPTCSSFRSFSELLAGAINASPPTPCPETSFAAIRPKTVRFKPVANRAPIGVVSSQAQVSGTEVCNSSDKVLKSDSKPTVVYKPLAKLVSKTTVSLLANLGSSNMSHQQTLAQVEARVQPPNQDRQHSRPHLSSNLHQTFPSQEETDRTSEPSKTASQNLEEDQKPLLPSSNGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPSCPVKKKVERSLDGQIAEIVYKGEHNHSKPQPPKRNSSGTLGQGFVSDGTGKAPLNYDSGTTGALKAGGGTPDNSCGLSGDCEEGSKGLEPEEDEPRSKRRKSENQSSETVIVGEGAQEPRIVVQNSTDSEILGDGFRWRKYGQKVVKGNSYPRSYYRCTSLKCNVRKHVERASEDPGSFITTYEGKHNHDMPTRNTNAATSEPDMQAHTNKEKP* 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14033450 14039562 - Vvi8g668 Vvi8g668 790891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g668 438 ProSiteProfiles WRKY domain profile. 351 416 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 SMART WRKY_cls 356 415 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 SMART WRKY_cls 194 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 MobiDBLite consensus disorder prediction 134 183 - -
Vvi8g668 438 MobiDBLite consensus disorder prediction 313 329 - -
Vvi8g668 438 SUPERFAMILY WRKY DNA-binding domain 193 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 ProSiteProfiles WRKY domain profile. 196 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 MobiDBLite consensus disorder prediction 134 199 - -
Vvi8g668 438 PANTHER WRKY TRANSCRIPTION FACTOR 44 6 419 - -
Vvi8g668 438 MobiDBLite consensus disorder prediction 245 341 - -
Vvi8g668 438 Gene3D WRKY domain 341 417 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 Gene3D WRKY domain 184 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 MobiDBLite consensus disorder prediction 400 438 - -
Vvi8g668 438 Pfam WRKY DNA -binding domain 196 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 Pfam WRKY DNA -binding domain 358 414 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vvi8g668 438 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 6 419 IPR044810 GO:0003700
Vvi8g668 438 SUPERFAMILY WRKY DNA-binding domain 351 416 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15184 PF03106 WRKY 9.10E-25 CL0274 Vvi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g668 - - vvi:100256868 868.226