Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g673 ATGAACGGTGATGGAAAGATAGGGTTACCTGATCCGGGTCAGTGCGGGGAAGATGGGAAGGATATTAAAGCTAGGGATGGAGATGAGGTTCCCTCTGCAGACGGCGAAGGTGACGATGTTAGTGATGATGAAGAGTCCATGGATTGTTACGAGGCGTTGGTCCTCATGAAATCTCGTGTTCTGCTGGTGGAAAATGATGATTCTACGCGCTATGTAATCGGTGCTTTGCTTCGCAACTGTGGCTATCAAGTTACAGAAACATCGAATGGATTGCAAGCATGGAGGATATTAAAAGATACAAGCAATCATATTGATCTTGTATTAACTGAGGTGAATTTACCTCGTCTATCAGGTATTGCACTGCTATGCAAGATTATGAACCACAAAACCCGCAAAAATATTCCAGTAATTATGATGTCTACACATGACTCCGGCGCCTTGGTGCTCAAGTGTTTGTCAAAGGGTGCAACCGACTTCCTAGTCAAGCCCGTAAGAAAGAATGAGCTCAAATTCCTTTGGCAACACATTTGGAGGAGGCGCCAAAATAATGGATTTCCTTGCGGAAGTAAAGGAGATACGCAGGATTTAAAGCCAAAGAGTGATGGGGATTCCAATTTTCAACCCCAACAACAGTGA 636 44.18 MNGDGKIGLPDPGQCGEDGKDIKARDGDEVPSADGEGDDVSDDEESMDCYEALVLMKSRVLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRILKDTSNHIDLVLTEVNLPRLSGIALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFLVKPVRKNELKFLWQHIWRRRQNNGFPCGSKGDTQDLKPKSDGDSNFQPQQQ* 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14072938 14074693 - Vvi8g673 Vvi8g673 790896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g673 211 MobiDBLite consensus disorder prediction 16 31 - -
Vvi8g673 211 PANTHER TWO-COMPONENT RESPONSE REGULATOR 36 182 IPR045279 GO:0009736
Vvi8g673 211 SUPERFAMILY CheY-like 58 181 IPR011006 -
Vvi8g673 211 Gene3D - 56 192 - -
Vvi8g673 211 Pfam Response regulator receiver domain 60 170 IPR001789 GO:0000160
Vvi8g673 211 SMART REC_2 58 173 IPR001789 GO:0000160
Vvi8g673 211 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 36 182 - -
Vvi8g673 211 MobiDBLite consensus disorder prediction 184 211 - -
Vvi8g673 211 MobiDBLite consensus disorder prediction 1 44 - -
Vvi8g673 211 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi8g673 Vvi13g197 ECH
Vvi6g346 Vvi8g673 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15185 PF00072 Response_reg 7.70E-23 CL0304 Vvi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g673 K12129 - vvi:100267136 424.091