Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g675 ATGGAAACGAGGCTTCTCCTACTCTTCCTCTCTGTCACTGTTCTTCTCATGGATGCCGCCAATGCTCAGATGCCAGGTTTTGTAAGTTTCGACTGTGGTGGTAGTGAAAATTTCACAGATGACCTTGGTCTTTGGTGGACTTCTGATGATCAATTGATGTATGGAGAAATAGCAACTATATCTGTTGCAAATGAGACACGAAAGCAATATACCACACTGAGGCATTTCCCTGCTGACAACAGGAAGTATTGCTACACACTTGATGTTATAAGCAGGACTAGGTACCTTGTAAGAGCGACTTTCTTGTATGGTAATTTTGACAACAACAAGGTTTATCCAAAGTTTGATATTTCCCTTGGGGCTACTCCTTGGTCTACAATTGTCATTTCGGATGCTAACACAATAGAGTCCAGTGAGTTGATATTCCTGGCTTCAGATCCTACTATTAGTGTGTGTTTATCCAATGCTACAACTGGGCAGCCATTTATCTCTACCCTTGAGCTCCGACAATTCAATGGTTCAATTTACTATACAGAATATGAAGAAGATTTCTTTCTTAGCGTGTCTGCAAGAGTAAATTTTGGTGCAGATAGTGAAGCTCCAGTCAGGTATCCAGATGACCCATTTGATAGAATATGGGAGTCTGACTCCTTGAAGAAAGCAAATTACTTGGTTGATGTTGCTCCTGGCACTGAGAAAGTTTCCACCCAGATGCCAATTGATGTCAATAAAGATAGCAGACCACCGGAAAAAGTGATGCAGACAGCTGTTGTTGGGAGAAATGGTACATTAAGTTACCGATTGAATCTAGATGGGTTTCCAGGTTTTGGATGGGCATTCACCTACCTTGCAGAAATTGAAGATTTGGGCCCAGAAGAAACAAGGAAATTCAGGCTAATACTCCCAAACATGCCTGATCTCAGCAAACCTGCTGTTAATATCCAAGAAAATGCTCAAGGAAAGTATCGTCTGTATGAGCCAGGATACCCCAATATATCTCTCCCCTTTGTATTATCTTTCAAGTTTGGAAAAACATCTGATTCTTCTCAGGGGCCACTTTTGAATGCTATGGAGATAAATAAATATCTGGAGAAACGTGATGGTTGTCTAGATGGATCTGCTATTGCTAGTATAGTTTTACAGTACTCATCAGAAGATTGGGCAAAAGAAGGTGGTGATCCATGCTTGCCAGTTCCATGGTCATGGGTAGCATGCAACTCTGATCCACAACCAAGGATAGTTTCAATTCATTTATCTGGAAAGAATTTGACAGGGAATATTCCCACAGATTTGACAAAGCTGAGTGGCTTAGTAGAGCTATGGCTTGATGGCAATGCACTGGCTGGTCCAATACCTGATTTTACTGGATTGATAAACTTGAAGACCATCCATCTTGAGAACAATCAGCTGTCTGGTGAGCTGCCATCCTCTTTGGTGGACCTTCAGAGTCTAAAGGAACTGTATGTGCAAAATAATATGTTGTCTGGGAAAGTGCCATCAGGTCTTCTCAATGAGAACTTGGATTTCAACTACTCAGGAAATGATAATCTTCATAAAGGGAGCACAGGAGGTAGACACATTGGTATTATCATTGGATCCTCAGTTGGGGCTGTTGTTCTGCTTATAGCTACTATTGCATCTTGCTTATTTATGCACAAAGGAAAGAAAAGATACTATGAACAGGACCAGCTTGGACATGGACTACCTGCTCAAAGGATAGTTTCTTCCTTGAATGATGCTGCCACAGAAGCTGCAAATTGCTTTAGTTTATCTGAAATTGAAGATGCTACAAGGAAATTTGAGAAGAAAATTGGTTCTGGGGGTTTTGGAGTGGTATATTATGGAAAAATGAAAGATGGAAAAGAAATTGCAGTCAAAGTACTAATCAATAACTCCTATCAGGGGAATAGAGAATTTTCAAATGAGGTGACCCTTCTTTCAAGAATCCATCACAGAAACCTGGTACAGTTTCTTGGGTATTGCCAAGAAGAAGGCAGAAGTATGCTTGTTTATGAGTTTATGCATAATGGAACTCTGAAGGAACATCTTTATGGCCCCTTGACACGTGAGCGAGCTATCAGTTGGATCAAGCGCCTTGAGATTGCTGAAGATGCGGCTAAAGGAATTGAGTACCTTCATACAGGATGTGTTCCATCCATCATTCATCGGGATTTGAAAAGTAGCAATATTCTTCTTGACAAATACATGAAAGCAAAGGTTTCAGATTTTGGTCTTTCAAAGCTAGCAGTAGATGGATCATCCCATGTATCGAGTGTGGTTCGTGGCACTGTGGGGTATCTGGATCCTGAGTATTATATTTCCCAGCAATTAACGGACAAGAGTGATGTTTATAGTTTTGGCGTCATCCTTCTTGAGCTGATATCTGGTCAAGAAGCAATATCTAATGAAAGCTTTGGTGTTAACTGCCGTAACATAGTCCAATGGGCAAAGTTACACATTGAAAGTGGGGATATCCAAGGTATCATTGATCCTTCATTACGTGATGAATATGACATCCAATCAATGTGGAAGATAGCTGAGAAAGCTTTGATGTGTGTCCAACCCCATGGGAGTATGAGGCCACCAATCTCAGAAGTGATAAAAGAAATCCAAGAGGCAATCTCAATTGAGAGGGGAGCAGAAGCAGCAAGAGAAGGCAACTCAGATGCATCAAGGAATTCTATTCATTCTTCCATCAACATGGGCATTGATGTGGGTCCAACTGAGAATTACTTGTCATTTGATGAGTCTATTGCAAGGCCAACTCCGCGATAG 2775 41.05 METRLLLLFLSVTVLLMDAANAQMPGFVSFDCGGSENFTDDLGLWWTSDDQLMYGEIATISVANETRKQYTTLRHFPADNRKYCYTLDVISRTRYLVRATFLYGNFDNNKVYPKFDISLGATPWSTIVISDANTIESSELIFLASDPTISVCLSNATTGQPFISTLELRQFNGSIYYTEYEEDFFLSVSARVNFGADSEAPVRYPDDPFDRIWESDSLKKANYLVDVAPGTEKVSTQMPIDVNKDSRPPEKVMQTAVVGRNGTLSYRLNLDGFPGFGWAFTYLAEIEDLGPEETRKFRLILPNMPDLSKPAVNIQENAQGKYRLYEPGYPNISLPFVLSFKFGKTSDSSQGPLLNAMEINKYLEKRDGCLDGSAIASIVLQYSSEDWAKEGGDPCLPVPWSWVACNSDPQPRIVSIHLSGKNLTGNIPTDLTKLSGLVELWLDGNALAGPIPDFTGLINLKTIHLENNQLSGELPSSLVDLQSLKELYVQNNMLSGKVPSGLLNENLDFNYSGNDNLHKGSTGGRHIGIIIGSSVGAVVLLIATIASCLFMHKGKKRYYEQDQLGHGLPAQRIVSSLNDAATEAANCFSLSEIEDATRKFEKKIGSGGFGVVYYGKMKDGKEIAVKVLINNSYQGNREFSNEVTLLSRIHHRNLVQFLGYCQEEGRSMLVYEFMHNGTLKEHLYGPLTRERAISWIKRLEIAEDAAKGIEYLHTGCVPSIIHRDLKSSNILLDKYMKAKVSDFGLSKLAVDGSSHVSSVVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGVNCRNIVQWAKLHIESGDIQGIIDPSLRDEYDIQSMWKIAEKALMCVQPHGSMRPPISEVIKEIQEAISIERGAEAAREGNSDASRNSIHSSINMGIDVGPTENYLSFDESIARPTPR* 925
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14093258 14106587 - Vvi8g675 Vvi8g675 790898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g675 924 Pfam Malectin-like domain 31 360 IPR024788 -
Vvi8g675 924 Pfam Protein tyrosine and serine/threonine kinase 599 800 IPR001245 GO:0004672|GO:0006468
Vvi8g675 924 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
Vvi8g675 924 PANTHER TYROSINE KINASE DOMAIN PROTEIN 11 907 - -
Vvi8g675 924 Gene3D Ribonuclease Inhibitor 376 521 IPR032675 -
Vvi8g675 924 Gene3D Transferase(Phosphotransferase) domain 1 674 895 - -
Vvi8g675 924 PANTHER OS07G0107800 PROTEIN-RELATED 11 907 - -
Vvi8g675 924 SMART serkin_6 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g675 924 SUPERFAMILY L domain-like 398 504 - -
Vvi8g675 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Vvi8g675 924 ProSiteProfiles Protein kinase domain profile. 598 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g675 924 CDD STKc_IRAK 604 872 - -
Vvi8g675 924 SUPERFAMILY Protein kinase-like (PK-like) 587 868 IPR011009 -
Vvi8g675 924 Gene3D Phosphorylase Kinase; domain 1 573 673 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76822 PF12819 Malectin_like 4.30E-76 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g675 - - vvi:100244826 1824.29