Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g689 ATGTACGGAGAGACCATGAGCGCCAAGTGCCGATTCACCGACACCGACATTACTAAGGTCTTGGCCACTTACTTCCCCGAAATCCAATTGTCGGCCAACGACCCTCGCCTCCACGTCACTTCTCAACTCATTCACTTCTTTTCTTCCCCATCCGCCCAACAATTCGTTTCGCAGGTCAAGAATGATGATGACATCTTCTCTTTGTCGCTTGACTTCAAACAATTTCATAAGATATGCGACCTTGAGGACTTTTATGCAGCTTTAGATACAAAACCTAAAGAAGCTTTATTATGTATGAGTGCTGCAGTTCACAAGGTTTTATCGACCAACTGGGATGACAATAGGTTGGAGGATGGTGTGAAGATAAATATCCGTCTGCACAACCACCCTGAAACTATGATTGCTTTGAAGAACCTAAAATCAGCATATATTGATAAACTTGTATCTGTACGTGGTACAGTAGTAAAAGCTAGCACGGTCAAGCCTCTAGTTGTACAGATGACTTTTGCCTGTGTTAAGTGTCAAACCAATATTTTACGTATTTTTCATGATGGAAAATTTTCACCACCATCCGTTTGCACCTTACATGGGTGCAAGAGCAGAACTTTTACTCCAATAAGATCCACTGCTCAACCCATAGATTTTCAGAAAATAAGGCAAGCACTCAACAATCTTTGA 678 41.74 MYGETMSAKCRFTDTDITKVLATYFPEIQLSANDPRLHVTSQLIHFFSSPSAQQFVSQVKNDDDIFSLSLDFKQFHKICDLEDFYAALDTKPKEALLCMSAAVHKVLSTNWDDNRLEDGVKINIRLHNHPETMIALKNLKSAYIDKLVSVRGTVVKASTVKPLVVQMTFACVKCQTNILRIFHDGKFSPPSVCTLHGCKSRTFTPIRSTAQPIDFQKIRQALNNL* 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14247901 14250749 - Vvi8g689 Vvi8g689 790912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g689 225 SUPERFAMILY Nucleic acid-binding proteins 63 219 IPR012340 -
Vvi8g689 225 Gene3D - 163 213 - -
Vvi8g689 225 Gene3D - 136 219 IPR012340 -
Vvi8g689 225 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 15 219 IPR031327 GO:0003677|GO:0005524|GO:0032508
Vvi8g689 225 PANTHER DNA HELICASE MCM8 15 219 - -
Vvi8g689 225 Pfam MCM OB domain 136 219 IPR033762 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g689 K10737 - vvi:100253345 440.269