Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g7 | ATGCCTAAGTTTATGTTAATGGGTGAAAACTTGTTTAGTCCACTTCCTCCTGGGGTACTCCAGTCTTTGAAGGGTCAGTGGGAAAATACACCACCAAGCTGGGAAAAGTCAGATCCTTGTGGCGTACCCTGGGAAGGAATCACATGCAACAACTCAAGGGTGATTGCATTGGGATTATCGACCATGGGCCTCAAAGGAAAGCTAGAGGGTGATATTGGGGGGCTAACCGAGTTGAGATCCTTGGACTTGTCATTCAATCTAGGTCTCACAGGTTCTCTCACTCCAAAGTTAGGGAATTTAGAAAATCTGAACATCCTAATCCTTGCAGGCTGTGGCTTCACCGGTCAAATTCCAGATGAATTGGGAAATCTTGCGCAGCTGACCTTCTTGGCACTGAATTCAAACAACTTAACTGGTCAAATACCTCCTTCTTTGGGTAGACTCTCCAATCTCTACTGGCTGGATCTGGCAGAGAATAAGTTGTCAGGACCTTTCCCAACTTCAACATTAACCAGCCCGGGCTTGGACCAACTTCTAAAGGCAAAACACTTCCATTTCAATAAGAATCAGCTTTCAGGCCCCATTCCGCGGAAACTTTTCAGCTCTGACATGGAACTAATACATGTACTATTTGATGGAAATCAATTGTCTGGGAGTATACCAGACACACTAGGACTTGTTCAGACTCTTGAGGTTCTGCGGCTTGACAGAAATTCTCTTAGTGGGACCGTCCCATCAAACCTCAACAACCTAACGATCGTCAATGAATTGAATTTAGCGCACAACCAACTTATTGGGCCAATACCAAACTTAACAGGAATGGACCACCTTAATTATGTCGACTTAAGTAACAACACTTTTGACCCATCAGAAGCTCCAGCTTGGTTCTCAACCTTACCATCACTCACCACCCTGATTCTAGAACATGGATCACTCTATGGGAGTGTGCCACAAAAAGTCTTCAGCTTTCCAGGGATAGAGCAAGTGAAACTAAAGAACAATGCATTCAATGACACATTCAGCATGGGTGACAGCATAGGCGATCAACTGCAGCTTGTTGATTTGCAAAACAACCAAATTCCATCAGTAACACTGAGTTCTGGATACACAGATGCATTAATACTCGTGGGAAACCCTGTGTGCAAGGTTACTCTCTTGAATACTGCCTACTGTCAAATTCAGGATCAAACCCCAAAGACATATTCTACCAACCTGGCTAATTGTGGAAGCGAACTTTGTTCCCCAGACCAGAAGCTCAATCCTCAGAGTTGTGAGTGCGCTTATGCATATGAAGGGACACTATACTTCAGAGGTCCAACCTTCAGGGATTTGTCTGACTTAAACAAATTCCATTCACTAGAATCAAGCCTTTGGACGAAACTGAACCTTACTCCTGGTTCAGTTTTTCTTCAGAACCCCTTCTTCAATATTGATGACTATCTTCAGATACAATTGGCACTCTTTCCACCCACAGGAAAATATTTTAATAGGTCAGAGGTTCAGAGGATTGGATTTTCCCTGAGTAATCAAACCTACAAGCCTCCTGAAGAATTTGGGCCCTACTATTTTATCGCATCTCCATACCACTTCCAAGGACATGGAGGAACTTCTTTTAGCTTGGGTGTGATTATTGGGATAGCAATTGGCTGTACCATTCTGGTTGTGGGGCTTGTGGCATTGGGGATATATGCTGTTCGACAAAAGAAACGTGCAGAAAGGGCTATTGAATTAAGCAAACCATTTGCTTCTTGGGCTCCAAGCGGCAAAGATAGTGGTGCTGCACCACAATTAAAGGGAGCAAGATGGTTCTCTTATGATGAACTCAAAAAGTGCACCAATAATTTCTCAGAAAGTAATGAGATTGGATCTGGGGGCTATGGCAAGGTTTATAGAGGAATGCTCTCTGGTGGACAAATAGTGGCGATCAAAAGAGCTCAGCAAGGATCTATGCAAGGTGGGCTCGAATTCAAAACTGAAATTGAGCTGCTTTCACGGGTTCATCATAAGAATCTTGTCGGCCTTGTGGGCTTTTGCTTTGAACAAGGAGAACAGATGCTGGTTTATGAATTTATGCCCAATGGAACACTCAGGGAGAGCTTGTCAGGGAGATCTGGCATTCATTTGGATTGGAAGAGGAGACTCCGTATTGCTTTAGGCTCAGCCAGAGGCTTAGCTTACCTTCATGAGCTTGCAAATCCTCCTATAATTCACAGAGATATCAAGTCCACCAATATTCTGTTGGATGAAAATTTAACCGCAAAGGTTGCAGATTTTGGTTTGTCTAAACTAGTATCAGACAGTGCAAAAGGGCATGTTTCAACTCAAGTCAAAGGCACATTGGGTTATCTTGATCCTGAATATTACATGACTCAACAACTAACTGAGAAGAGCGATGTATACAGCTATGGAGTAGTTATGCTTGAACTGGTATCTGCTAGGCAACCAATTGAGAAGGGAAAGTACATTGTTCGTGAGGTGAGAATGGCAATGGATAAGAATGATGAAGAGCACTATGGCTTGAGGGAGATAATGGATCCAGCAATCAGAAACGTGACAAATCTTATAGGGTTTAGGAAGTTTCTGGAGTTGGCCATGCAATGTGTTGAAGAGTCAGCTGGAGACCGTCCAACAATGAGTGATGTGGTCAAGACAATTGAAACCGTTCTACAGAATGATGGAATGAACACAAACTCAACGACATCTGCTTCCTCATCTGCTACCGAGTTCGGAGCTTCAAAAGGGGTTCCTAGGCATCCTTACAATGATTCCCTGCCAAGAAAGGAAGTTAATGATAGTGATGCCTTCGACTACAGTGGTGGATACACACTCTCAACAAAGGTTGAGCCAAAGTAG | 2853 | 43.43 | MPKFMLMGENLFSPLPPGVLQSLKGQWENTPPSWEKSDPCGVPWEGITCNNSRVIALGLSTMGLKGKLEGDIGGLTELRSLDLSFNLGLTGSLTPKLGNLENLNILILAGCGFTGQIPDELGNLAQLTFLALNSNNLTGQIPPSLGRLSNLYWLDLAENKLSGPFPTSTLTSPGLDQLLKAKHFHFNKNQLSGPIPRKLFSSDMELIHVLFDGNQLSGSIPDTLGLVQTLEVLRLDRNSLSGTVPSNLNNLTIVNELNLAHNQLIGPIPNLTGMDHLNYVDLSNNTFDPSEAPAWFSTLPSLTTLILEHGSLYGSVPQKVFSFPGIEQVKLKNNAFNDTFSMGDSIGDQLQLVDLQNNQIPSVTLSSGYTDALILVGNPVCKVTLLNTAYCQIQDQTPKTYSTNLANCGSELCSPDQKLNPQSCECAYAYEGTLYFRGPTFRDLSDLNKFHSLESSLWTKLNLTPGSVFLQNPFFNIDDYLQIQLALFPPTGKYFNRSEVQRIGFSLSNQTYKPPEEFGPYYFIASPYHFQGHGGTSFSLGVIIGIAIGCTILVVGLVALGIYAVRQKKRAERAIELSKPFASWAPSGKDSGAAPQLKGARWFSYDELKKCTNNFSESNEIGSGGYGKVYRGMLSGGQIVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDIKSTNILLDENLTAKVADFGLSKLVSDSAKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSYGVVMLELVSARQPIEKGKYIVREVRMAMDKNDEEHYGLREIMDPAIRNVTNLIGFRKFLELAMQCVEESAGDRPTMSDVVKTIETVLQNDGMNTNSTTSASSSATEFGASKGVPRHPYNDSLPRKEVNDSDAFDYSGGYTLSTKVEPK* | 951 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 221734 | 227238 | - | Vvi8g7 | Vvi8g7 | 790230 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g7 | 950 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 735 | 747 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi8g7 | 950 | MobiDBLite | consensus disorder prediction | 892 | 950 | - | - | |
Vvi8g7 | 950 | SUPERFAMILY | Protein kinase-like (PK-like) | 600 | 898 | IPR011009 | - | |
Vvi8g7 | 950 | MobiDBLite | consensus disorder prediction | 892 | 910 | - | - | |
Vvi8g7 | 950 | Gene3D | Ribonuclease Inhibitor | 172 | 408 | IPR032675 | - | |
Vvi8g7 | 950 | SUPERFAMILY | RNI-like | 271 | 402 | - | - | |
Vvi8g7 | 950 | SMART | serkin_6 | 615 | 889 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g7 | 950 | Pfam | Protein tyrosine and serine/threonine kinase | 618 | 884 | IPR001245 | GO:0004672|GO:0006468 | |
Vvi8g7 | 950 | Gene3D | Transferase(Phosphotransferase) domain 1 | 691 | 910 | - | - | |
Vvi8g7 | 950 | CDD | STKc_IRAK | 621 | 886 | - | - | |
Vvi8g7 | 950 | Gene3D | Ribonuclease Inhibitor | 19 | 171 | IPR032675 | - | |
Vvi8g7 | 950 | SUPERFAMILY | L domain-like | 26 | 285 | - | - | |
Vvi8g7 | 950 | PANTHER | LRR RECEPTOR-LIKE KINASE | 18 | 922 | - | - | |
Vvi8g7 | 950 | ProSiteProfiles | Protein kinase domain profile. | 615 | 889 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi8g7 | 950 | Gene3D | Phosphorylase Kinase; domain 1 | 588 | 690 | - | - | |
Vvi8g7 | 950 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 18 | 922 | - | - | |
Vvi8g7 | 950 | ProSitePatterns | Protein kinases ATP-binding region signature. | 621 | 643 | IPR017441 | GO:0005524 |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76823 | PF07714 | PK_Tyr_Ser-Thr | 4.10E-48 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g7 | - | - | vvi:100257037 | 1847.4 |