Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g7 ATGCCTAAGTTTATGTTAATGGGTGAAAACTTGTTTAGTCCACTTCCTCCTGGGGTACTCCAGTCTTTGAAGGGTCAGTGGGAAAATACACCACCAAGCTGGGAAAAGTCAGATCCTTGTGGCGTACCCTGGGAAGGAATCACATGCAACAACTCAAGGGTGATTGCATTGGGATTATCGACCATGGGCCTCAAAGGAAAGCTAGAGGGTGATATTGGGGGGCTAACCGAGTTGAGATCCTTGGACTTGTCATTCAATCTAGGTCTCACAGGTTCTCTCACTCCAAAGTTAGGGAATTTAGAAAATCTGAACATCCTAATCCTTGCAGGCTGTGGCTTCACCGGTCAAATTCCAGATGAATTGGGAAATCTTGCGCAGCTGACCTTCTTGGCACTGAATTCAAACAACTTAACTGGTCAAATACCTCCTTCTTTGGGTAGACTCTCCAATCTCTACTGGCTGGATCTGGCAGAGAATAAGTTGTCAGGACCTTTCCCAACTTCAACATTAACCAGCCCGGGCTTGGACCAACTTCTAAAGGCAAAACACTTCCATTTCAATAAGAATCAGCTTTCAGGCCCCATTCCGCGGAAACTTTTCAGCTCTGACATGGAACTAATACATGTACTATTTGATGGAAATCAATTGTCTGGGAGTATACCAGACACACTAGGACTTGTTCAGACTCTTGAGGTTCTGCGGCTTGACAGAAATTCTCTTAGTGGGACCGTCCCATCAAACCTCAACAACCTAACGATCGTCAATGAATTGAATTTAGCGCACAACCAACTTATTGGGCCAATACCAAACTTAACAGGAATGGACCACCTTAATTATGTCGACTTAAGTAACAACACTTTTGACCCATCAGAAGCTCCAGCTTGGTTCTCAACCTTACCATCACTCACCACCCTGATTCTAGAACATGGATCACTCTATGGGAGTGTGCCACAAAAAGTCTTCAGCTTTCCAGGGATAGAGCAAGTGAAACTAAAGAACAATGCATTCAATGACACATTCAGCATGGGTGACAGCATAGGCGATCAACTGCAGCTTGTTGATTTGCAAAACAACCAAATTCCATCAGTAACACTGAGTTCTGGATACACAGATGCATTAATACTCGTGGGAAACCCTGTGTGCAAGGTTACTCTCTTGAATACTGCCTACTGTCAAATTCAGGATCAAACCCCAAAGACATATTCTACCAACCTGGCTAATTGTGGAAGCGAACTTTGTTCCCCAGACCAGAAGCTCAATCCTCAGAGTTGTGAGTGCGCTTATGCATATGAAGGGACACTATACTTCAGAGGTCCAACCTTCAGGGATTTGTCTGACTTAAACAAATTCCATTCACTAGAATCAAGCCTTTGGACGAAACTGAACCTTACTCCTGGTTCAGTTTTTCTTCAGAACCCCTTCTTCAATATTGATGACTATCTTCAGATACAATTGGCACTCTTTCCACCCACAGGAAAATATTTTAATAGGTCAGAGGTTCAGAGGATTGGATTTTCCCTGAGTAATCAAACCTACAAGCCTCCTGAAGAATTTGGGCCCTACTATTTTATCGCATCTCCATACCACTTCCAAGGACATGGAGGAACTTCTTTTAGCTTGGGTGTGATTATTGGGATAGCAATTGGCTGTACCATTCTGGTTGTGGGGCTTGTGGCATTGGGGATATATGCTGTTCGACAAAAGAAACGTGCAGAAAGGGCTATTGAATTAAGCAAACCATTTGCTTCTTGGGCTCCAAGCGGCAAAGATAGTGGTGCTGCACCACAATTAAAGGGAGCAAGATGGTTCTCTTATGATGAACTCAAAAAGTGCACCAATAATTTCTCAGAAAGTAATGAGATTGGATCTGGGGGCTATGGCAAGGTTTATAGAGGAATGCTCTCTGGTGGACAAATAGTGGCGATCAAAAGAGCTCAGCAAGGATCTATGCAAGGTGGGCTCGAATTCAAAACTGAAATTGAGCTGCTTTCACGGGTTCATCATAAGAATCTTGTCGGCCTTGTGGGCTTTTGCTTTGAACAAGGAGAACAGATGCTGGTTTATGAATTTATGCCCAATGGAACACTCAGGGAGAGCTTGTCAGGGAGATCTGGCATTCATTTGGATTGGAAGAGGAGACTCCGTATTGCTTTAGGCTCAGCCAGAGGCTTAGCTTACCTTCATGAGCTTGCAAATCCTCCTATAATTCACAGAGATATCAAGTCCACCAATATTCTGTTGGATGAAAATTTAACCGCAAAGGTTGCAGATTTTGGTTTGTCTAAACTAGTATCAGACAGTGCAAAAGGGCATGTTTCAACTCAAGTCAAAGGCACATTGGGTTATCTTGATCCTGAATATTACATGACTCAACAACTAACTGAGAAGAGCGATGTATACAGCTATGGAGTAGTTATGCTTGAACTGGTATCTGCTAGGCAACCAATTGAGAAGGGAAAGTACATTGTTCGTGAGGTGAGAATGGCAATGGATAAGAATGATGAAGAGCACTATGGCTTGAGGGAGATAATGGATCCAGCAATCAGAAACGTGACAAATCTTATAGGGTTTAGGAAGTTTCTGGAGTTGGCCATGCAATGTGTTGAAGAGTCAGCTGGAGACCGTCCAACAATGAGTGATGTGGTCAAGACAATTGAAACCGTTCTACAGAATGATGGAATGAACACAAACTCAACGACATCTGCTTCCTCATCTGCTACCGAGTTCGGAGCTTCAAAAGGGGTTCCTAGGCATCCTTACAATGATTCCCTGCCAAGAAAGGAAGTTAATGATAGTGATGCCTTCGACTACAGTGGTGGATACACACTCTCAACAAAGGTTGAGCCAAAGTAG 2853 43.43 MPKFMLMGENLFSPLPPGVLQSLKGQWENTPPSWEKSDPCGVPWEGITCNNSRVIALGLSTMGLKGKLEGDIGGLTELRSLDLSFNLGLTGSLTPKLGNLENLNILILAGCGFTGQIPDELGNLAQLTFLALNSNNLTGQIPPSLGRLSNLYWLDLAENKLSGPFPTSTLTSPGLDQLLKAKHFHFNKNQLSGPIPRKLFSSDMELIHVLFDGNQLSGSIPDTLGLVQTLEVLRLDRNSLSGTVPSNLNNLTIVNELNLAHNQLIGPIPNLTGMDHLNYVDLSNNTFDPSEAPAWFSTLPSLTTLILEHGSLYGSVPQKVFSFPGIEQVKLKNNAFNDTFSMGDSIGDQLQLVDLQNNQIPSVTLSSGYTDALILVGNPVCKVTLLNTAYCQIQDQTPKTYSTNLANCGSELCSPDQKLNPQSCECAYAYEGTLYFRGPTFRDLSDLNKFHSLESSLWTKLNLTPGSVFLQNPFFNIDDYLQIQLALFPPTGKYFNRSEVQRIGFSLSNQTYKPPEEFGPYYFIASPYHFQGHGGTSFSLGVIIGIAIGCTILVVGLVALGIYAVRQKKRAERAIELSKPFASWAPSGKDSGAAPQLKGARWFSYDELKKCTNNFSESNEIGSGGYGKVYRGMLSGGQIVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSGIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDIKSTNILLDENLTAKVADFGLSKLVSDSAKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSYGVVMLELVSARQPIEKGKYIVREVRMAMDKNDEEHYGLREIMDPAIRNVTNLIGFRKFLELAMQCVEESAGDRPTMSDVVKTIETVLQNDGMNTNSTTSASSSATEFGASKGVPRHPYNDSLPRKEVNDSDAFDYSGGYTLSTKVEPK* 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 221734 227238 - Vvi8g7 Vvi8g7 790230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g7 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Vvi8g7 950 MobiDBLite consensus disorder prediction 892 950 - -
Vvi8g7 950 SUPERFAMILY Protein kinase-like (PK-like) 600 898 IPR011009 -
Vvi8g7 950 MobiDBLite consensus disorder prediction 892 910 - -
Vvi8g7 950 Gene3D Ribonuclease Inhibitor 172 408 IPR032675 -
Vvi8g7 950 SUPERFAMILY RNI-like 271 402 - -
Vvi8g7 950 SMART serkin_6 615 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g7 950 Pfam Protein tyrosine and serine/threonine kinase 618 884 IPR001245 GO:0004672|GO:0006468
Vvi8g7 950 Gene3D Transferase(Phosphotransferase) domain 1 691 910 - -
Vvi8g7 950 CDD STKc_IRAK 621 886 - -
Vvi8g7 950 Gene3D Ribonuclease Inhibitor 19 171 IPR032675 -
Vvi8g7 950 SUPERFAMILY L domain-like 26 285 - -
Vvi8g7 950 PANTHER LRR RECEPTOR-LIKE KINASE 18 922 - -
Vvi8g7 950 ProSiteProfiles Protein kinase domain profile. 615 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g7 950 Gene3D Phosphorylase Kinase; domain 1 588 690 - -
Vvi8g7 950 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 922 - -
Vvi8g7 950 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76823 PF07714 PK_Tyr_Ser-Thr 4.10E-48 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g7 - - vvi:100257037 1847.4