Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g700 ATGGCGTTCAACATGACGTCCATTAAGACATCATCTGATGGAGCTTGGCAAGGTGATAATCCGCTGAGGTTTGCCTTCCCACTTCTCATTGTTCAAACCACCTTAGTCCTCAGCATCAGCCGTTTTCTCGCCTTCCTCCTCAAACCCTTCCATCAACCCAGAGTCATTGCCGAGATTATTGGTGGAATTCTGCTCGGACCTTCAGCTCTGGGCCGAAACAAAGATTTCTTGCACCTTGTTTTTCCGCCGTGGAGCACTCCGATACTGGAGTCGGTGGCAAGTGTTGGTCTTCTCTTCTTTTTATTTCTTGTTGGTCTTGAACTCGATTTAAGTTCCATTCGCCGCAGCGGAAAAAGAGCTTTCGGAATAGCACTTGCTGGAATCTCCCTCCCCTTTATCTTCGGAGTTGGAATCACCTTCCTCCTTCGGAAAGCTGTTGATGGAGAGGACAAAGTGGGCTTCAGTCAATGCATCTTGTTCATTGGGGTCTCCCTCTCCATCACTGCCTTTCCCGTTCTCGCGCGCATTTTAGCAGAACTCAAGCTACTAACAACCGACGTGGGCCAGACCGCCATGGCCGCCGCCGCCTTCAACGACGTGGCCGCCTGGATCTTGCTGGCCCCGGCCGTAGCCCTAGCAGGTAATGGGGGATCACATAGCAGCCCATTAGCTTCCATATGGATCCTTATTTCAGGCGTTGCTTTTGTGGCCTTCATGCTAACCATCATTCGCCCAGCAATGAATTGGGTTGGTCGCCAGTGCTCGCGGAAGCACGATTCCATGGACGAAGCGTATATCTGTCTGACCTTAGCGGGAGTGATGCTATCCGGGTTTACGACAGACCTTATAGGAATACACGCCATATTTGGAGGGTTCGTGTTCGGATTAACCATTCCCAAAGGCGGAGAATTTGCACAGAGATTAATAAAAAGGATAGAAGATTTCGTTACAGGCTTGCTTCTGCCGCTCTACTTCGCTTCAAGCGGATTGAAGACGGACGTGGCGAAAATACAGGGAGTGAAGGCGTGGGGGCTGTTGGTGTTGGTGATATCGACGGCGTGCGCGGGGAAGGTACTGGGGACGTTTGTAGTGGCAATGCTGTGTATGACGCCGGTGAGGGAATCTTTGGTGTTGGGCGTTCTGATGAATACTAAAGGCCTGGTGGAGCTTATAGTTCTCAATATTGGCAAAGAGAAGAAGGTACTTAACGATGAGGTGTTTGCAATTTTGGTGCTCATGGCACTCTTCACCACCTTCATGACAACTCCAGCAGTGATGGCCATTTACAAACCCATCCGACGAATAGCCACACAGGCTCAGCCTCAAATACAGCGGGAATCGAATGTGGCTGAAAACTCATCACAGGACAAGCTTCGGATCCTGGCTTGTGTGCATGGTCCTGCAAATGTACCCTCACTTATCAGCCTCATTGACTCCACTTGTAACGCTAACAAATCCCCACTCAAGCTTTACGTGATGCATCTGATGGAGCTCACTGATCGCACCTCCTCCATCCTTATGGTTCAACGTGGCAGGAAGAATGGATTTCCATTCATCAAAGGCTTTCGGAGAGGGGAAGTCACTGTTCGGCCAACCAAGGCCATCTCGGCTTTGTCCACGATGCATGAGGACATTTGCCATGCGGCCAAAAAGAAACGGGTTGGAATGATCGTCTTGTCCTTCCACAAGCAGTGGAGAGGAGAGGGAGAGGAGGCGGTGGAGAATGTGGGACATGAATGGAGAGGAGTGAATCAAAGGGTACTAAAAAATGCACCCTGCCCGGTGGGGGTGCTTGTGGACCGTGGATTTGGTGGAGTTGAAAGGAGGGTGTGCATATTGTTCTTGGGCGGGCCAGATGACCGCTACGCTTTGAAACTGGGCGGGAGTATGGCTGAGCATTCGGCAGTTAGAGTGACACTAGTGAGGTTGGTTGAAAAGGGTAAGATTGACTCTAACAGCATCAGTTCCCAGGGACTGGCACAGGATGGATGTATAGACGTATGTTGTGCCTCCTCAACTACTCCTATCTACTGTGGGAAGGAGAAGGAGCTGGATGAGGCAACAGTTGCAGAATTTAGGAGTAGGTGGGAAGGGTCAGCAAAGCACGTGGAGAAGGAGGTTGAGGCCACCAACGTGTTGGAAGAGGTGTTGTTGGCAATAGGCCGGTGCAGGGAGTATGAGCTGATCGTAGTGGGTAAGGGTGGATTTCCACCAAATATGGTAGCAATAGCACAACTGTCGGATCACCAACCAGAGCATGCTGAGTTGGGTCCCATTGGAGACGTGTTGGCATCTTCAGGACGAGGCATCACGGCTTCTGTGCTCGTCATTCAGCACCACTCCTTACCACATGAACACCACCAACCACTGTTGATGCCAATCCATGATCACATGGATGATACCATCACGGCTGAGGAACCCACAGTCTGA 2430 50.86 MAFNMTSIKTSSDGAWQGDNPLRFAFPLLIVQTTLVLSISRFLAFLLKPFHQPRVIAEIIGGILLGPSALGRNKDFLHLVFPPWSTPILESVASVGLLFFLFLVGLELDLSSIRRSGKRAFGIALAGISLPFIFGVGITFLLRKAVDGEDKVGFSQCILFIGVSLSITAFPVLARILAELKLLTTDVGQTAMAAAAFNDVAAWILLAPAVALAGNGGSHSSPLASIWILISGVAFVAFMLTIIRPAMNWVGRQCSRKHDSMDEAYICLTLAGVMLSGFTTDLIGIHAIFGGFVFGLTIPKGGEFAQRLIKRIEDFVTGLLLPLYFASSGLKTDVAKIQGVKAWGLLVLVISTACAGKVLGTFVVAMLCMTPVRESLVLGVLMNTKGLVELIVLNIGKEKKVLNDEVFAILVLMALFTTFMTTPAVMAIYKPIRRIATQAQPQIQRESNVAENSSQDKLRILACVHGPANVPSLISLIDSTCNANKSPLKLYVMHLMELTDRTSSILMVQRGRKNGFPFIKGFRRGEVTVRPTKAISALSTMHEDICHAAKKKRVGMIVLSFHKQWRGEGEEAVENVGHEWRGVNQRVLKNAPCPVGVLVDRGFGGVERRVCILFLGGPDDRYALKLGGSMAEHSAVRVTLVRLVEKGKIDSNSISSQGLAQDGCIDVCCASSTTPIYCGKEKELDEATVAEFRSRWEGSAKHVEKEVEATNVLEEVLLAIGRCREYELIVVGKGGFPPNMVAIAQLSDHQPEHAELGPIGDVLASSGRGITASVLVIQHHSLPHEHHQPLLMPIHDHMDDTITAEEPTV* 810
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14398773 14405247 - Vvi8g700 Vvi8g700 790923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g700 809 Gene3D - 508 785 - -
Vvi8g700 809 Gene3D - 28 438 IPR038770 -
Vvi8g700 809 Pfam Sodium/hydrogen exchanger family 35 424 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi8g700 809 PANTHER CATION/H+ EXCHANGER 3 8 802 - -
Vvi8g700 809 PANTHER CATION/H + ANTIPORTER 8 802 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g700 - - vvi:100246026 1563.51