Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g701 ATGACAGTCAACATAACCTCGATTAGCACATCGTCCAACGGAGTCTGGCAAGGTGATAATCCCTTGGATTTCGCCTTCCCGTTGTTAATAGTTCAAACTACCTTGATCCTCGCCCTCAGTCGCTTCCTTGCATTTCTTCTTAAACCCCTCCGTCAACCCAAAGTCATTGCAGAGATTATTGGTGGGATTTTACTTGGACCCTCTGCTTTGGGGCGAAACCAGAATTACTTGCACCGAATTTTTCCGAGTTGGAGCACTCCGATACTGGAATCTGTGGCAAGTATAGGGCTTCTGTTTTTTCTCTTCCTTGTGGGTCTCGAATTGGATCTCAGCTCCATTCGTCGGAGCGGCAGAAAAGCCCTCAGTATAGCGACGGTCGGAATTACTCTTCCTTTTGTCTGCGGCGTAGGGGTCGCCTTTGTACTTCGGAAAAGTGTTGACGGAGCCGACAAAGCCGGTTATGGTACCTTCCTCGTGTTCATGGGAGTGGCCCTTTCTATTACCGCCTTCCCCGTCCTCGCTCGTATATTGGCTGAACTCAAACTACTCACCACCCGGGTGGGTGAGACCGCCATGGCCGCCGCTGCGTTCAACGACGTGGTTGCGTGGATTTTGCTGGCTCTGGCAGTGGCTCTCGCCGGCGACGGAGAAGGTGGAGAACACAAGAGCCCATTAATATCAGTGTGGGTCCTCCTCTCTGGTGTTGCTTTTGTTATTTTCATGATGGTAGTGATAAAGCCGGCGATGAGTTGGGTAGCTCGGCGCTCGCCGGACAGCCACTCAGTAGACGAAGCCTATATATGCTTGACCCTTGCGGGAGTAATGGTGTCGGGATTTGTGACGGATCTGATAGGAATCCACTCCATATTTGGCGCGTTTGTGTTCGGACTAACCATTCCGAAAGGAGGAGGATTTTCAGAAAGACTGATAGAGAGGATAGAAGACTTTGTAACAGGGTTACTTCTTCCACTATACTTTGCGTCGAGCGGGTTAAAGACGAACGTTGCTAAAATACGGGGTTTGGAGGCGTGGGGACTATTGGTGCTGGTGATCACAACGGCATGTGCAGGCAAGATTGTCGGAACCTTCGTGGTGGCCATGATGTGTATGATTCCCGCAAGGGAATCCCTCACGCTGGGTGTGTTGATGAATACCAAAGGCTTAGTTGAGCTTATTGTTCTCAACATCGGAAAGGAGAAGAAGGCAAAATTTTCTTCTAAAAGAGGGATTAGGCTTCATCTGCAAATTGAATGGGACCAGGTCCTCAACGACGAGATCTTTGCAATTCTAGTCCTTATGGCATTATTCACCACCTTCATGACAACTCCGATAGTGATGACCATTTACAAACCGGTACGTGGAGGCCCCGCTCGCACTCACCGGAGATTACGCGACTTCTCCAGCGTTGACAGCTCCAAATACGACCTCCGAATCCTGGCCTGCGTCCACGGGCCCGGAAACGTGCCTTCACTCATCAGCCTCATAGAGGCTACTCGGAGCGCTAAGAAATCTCAACTCAAACTATATGTAATGCGTCTGGTTGAGCTCACTGAGAGATCCTCCTCCATCATTATGGTCCAACGCGCCCGAAAGAATGGGTTCCCCTTCATCAACCGCTTCCGCCGGGGCCAGTCAGACGACCGAGTTGAGGTTGCATTTGAAGCGTACGGTCAATTGGGTCGAGTCTCAGTGCGACCAACCACGGCCATCTCATCATTATCCACTATGCACGAGGACATTTGCCATGTGGCTGAAGAAAAGAGGGCGACCATGGTTATCTTGCCCTTCCACAAGCAGTGGAAAGGAGAGGGCTACGAGTCGATGGAGAACATGGGTAACGGTTGGAGAGGGGTTAATCAGAGGGTCCTCAAGAACTCGCCTTGTTCGGTGGCTGTCCTTGTGGACCGTGGATTTGGGAGTGGGCCACAGCAGACACGTGGGCCCACCTCTACTGTCACTCAACGGATTTGTATATTGTTCTTTGGTGGGCCGGATGACCGCGAGGCTTTGGAGTTGGGTGCAAGAATGGCTGAGCACCCAGCGGTTAAGGTGACCGTAATAAGGTTCGTTGAAAAAGACGGTTCAGACAGTAAAGACATTATTTTACGGCCTTCTCCAGAAAAATGCGATGAGCAGAGCTATAGCTTCTCAACCGCCGCCATGGACCGCCAGAAGGAGAAGGAGTTGGACGAGATTGCGACGGCGGAGTTCAAGAGCAGGTGGGGAGGGTTGGTGGAGTACGTAGAGAAGGTGGCGAGCAACGTCGTGGAGGGAGTGTTGGCAATAGGGAAGAGTGGGGATTACGATCTGGTGGTGGTGGGCAAGGGTCGATTCCCGTCGACAATGGTAGCGGAACTGGCGGAACGGCAAGCGGAGCACGCAGAGTTAGGGCCGATTGGAGACATATTGGCGTCGTCGGGACAGGGGATTGTGTCCTCCGTGCTTGTGATTCAGCAACACGATATAGCTCATGCAGAGGAAGTTCCGGTGTCTAAGGTAGTCAACAGTAAGGATGCTACAAGCAACGGTGATGATGGACCCTCTAAAAGGAGAGAAGTCACAAATGACTGTGTGTGA 2577 51.57 MTVNITSISTSSNGVWQGDNPLDFAFPLLIVQTTLILALSRFLAFLLKPLRQPKVIAEIIGGILLGPSALGRNQNYLHRIFPSWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGRKALSIATVGITLPFVCGVGVAFVLRKSVDGADKAGYGTFLVFMGVALSITAFPVLARILAELKLLTTRVGETAMAAAAFNDVVAWILLALAVALAGDGEGGEHKSPLISVWVLLSGVAFVIFMMVVIKPAMSWVARRSPDSHSVDEAYICLTLAGVMVSGFVTDLIGIHSIFGAFVFGLTIPKGGGFSERLIERIEDFVTGLLLPLYFASSGLKTNVAKIRGLEAWGLLVLVITTACAGKIVGTFVVAMMCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKAKFSSKRGIRLHLQIEWDQVLNDEIFAILVLMALFTTFMTTPIVMTIYKPVRGGPARTHRRLRDFSSVDSSKYDLRILACVHGPGNVPSLISLIEATRSAKKSQLKLYVMRLVELTERSSSIIMVQRARKNGFPFINRFRRGQSDDRVEVAFEAYGQLGRVSVRPTTAISSLSTMHEDICHVAEEKRATMVILPFHKQWKGEGYESMENMGNGWRGVNQRVLKNSPCSVAVLVDRGFGSGPQQTRGPTSTVTQRICILFFGGPDDREALELGARMAEHPAVKVTVIRFVEKDGSDSKDIILRPSPEKCDEQSYSFSTAAMDRQKEKELDEIATAEFKSRWGGLVEYVEKVASNVVEGVLAIGKSGDYDLVVVGKGRFPSTMVAELAERQAEHAELGPIGDILASSGQGIVSSVLVIQQHDIAHAEEVPVSKVVNSKDATSNGDDGPSKRREVTNDCV* 859
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14416398 14420572 - Vvi8g701 Vvi8g701 790924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g701 858 MobiDBLite consensus disorder prediction 833 858 - -
Vvi8g701 858 Pfam Sodium/hydrogen exchanger family 36 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vvi8g701 858 Gene3D - 476 797 - -
Vvi8g701 858 Gene3D - 28 453 IPR038770 -
Vvi8g701 858 PANTHER CATION/H+ EXCHANGER 3 8 837 - -
Vvi8g701 858 MobiDBLite consensus disorder prediction 843 858 - -
Vvi8g701 858 PANTHER CATION/H + ANTIPORTER 8 837 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g701 - - vvi:100264818 1585.08