Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g711 ATGAACCCCATTAACACCGTCTTTGACGCAAAGAGGTTGATTGGTAGAAGATTCAGTGATGCGACTGTCCAGAGTGACATCAAGTTGTGGCCATTCAAGGTTGTTGCTGGACCGGGTGACAAGCCCATGATTGTAGTTAACTACAAGGGCGAGGAGAAGCAGTTTGCTGCAGAGGAAATTTCTTCCATGGTTCTAATGAAGATGCGTGAGATTGCTGAGGCCTACTTGGGTTCTGCTGTGAAAAATGCTGTGAAGAATGTCTTGATCTTTGATCTTGGCGGGGGTACTTTTGATGTCTCTCTTCTCACCATTGAGGAGGATTTTGATAACAGAATGGCGTTGATTTCTACACCACCATTACCCGTGCCAGATTCGAGGAGCTTAACATGGACCTCTTCAGGAAATGTATGGAGCCCGTTGAGAAGTAATTCCCAAAGTCCAGCAGCTTTTACAGGACTTCTTCAATGGGAAGGAACTTTGCAAGAGCATCAACCCTGA 498 45.78 MNPINTVFDAKRLIGRRFSDATVQSDIKLWPFKVVAGPGDKPMIVVNYKGEEKQFAAEEISSMVLMKMREIAEAYLGSAVKNAVKNVLIFDLGGGTFDVSLLTIEEDFDNRMALISTPPLPVPDSRSLTWTSSGNVWSPLRSNSQSPAAFTGLLQWEGTLQEHQP* 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14518512 14520515 + Vvi8g711 Vvi8g711 790934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g711 165 Pfam Hsp70 protein 1 84 IPR013126 GO:0005524|GO:0140662
Vvi8g711 165 SUPERFAMILY Actin-like ATPase domain 2 84 IPR043129 -
Vvi8g711 165 Gene3D - 1 83 - -
Vvi8g711 165 ProSitePatterns Heat shock hsp70 proteins family signature 2. 89 102 IPR018181 -
Vvi8g711 165 Gene3D - 84 118 - -
Vvi8g711 165 PANTHER HEAT SHOCK PROTEIN 70KDA 84 107 IPR013126 GO:0005524|GO:0140662
Vvi8g711 165 PANTHER HEAT SHOCK PROTEIN 70KDA 1 84 IPR013126 GO:0005524|GO:0140662
Vvi8g711 165 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 84 107 - -
Vvi8g711 165 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 84 - -
Vvi8g711 165 SUPERFAMILY Actin-like ATPase domain 86 112 IPR043129 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g426 Vvi8g711 ECH
Vvi8g711 Vvi13g281 ECH
Vvi6g423 Vvi8g711 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g711 K03283 - vvi:100259551 187.578