Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g725 ATGGCGAACCCTAGGCTTCGACTTCTCCTTCCTTGGAGGAAATTCTCCAAAAGAGACTGGGCAATCGCAGCCTTCGGATTCACCATCTTCTTCTTCGCTCTCTCTTTCACCTCCACCAAAACCATCGCACCCCTGGATTTGGTTGACTTGACGTTGGTGCGCCATGCCAAGGATAAAGGCGCCGTTTGTTTAGATGGTAGTGCCCCTGGATATCATTTTCGAAGTGGTTTTGGATCTGGCTCTAACAATTGGGTTCTTCATATAGAGGGTGGAGGCTGGTGTAATACTGTAGCATCTTGTTTAATTCGTAAAACAACTGCACTAGGTTCTTCAAACTACATGGAACGTCAAGTTCGCTTTTCCGGAATTTTAAGCCATGACTCATCACAGAATCCTGATTTCTTTGACTGGAATAAAGTCAAGCTGCGGTATTGTGATGGTGCTTCTTTTGCTGGAAACTCTCAAAAGAATGAAACACAACTCTTCTTCAGAGGTCAGCGCATCTGGGAAGCAGTTATGGATGAACTCTTATCAATAGGACTGTCTAATGCTAAACAGGTTCTTCTTTCAGGGTGCTCTGCTGGAGGATTGGCAACTCTCATACACTGTGATGACTTCCGGGGGATTTTGCCAAAGGATGCCACTGTCAAATGCCTTGCTGATGCAGGTTTTTTCCTTGATGAGAAAGATGTTACTGGAAATCGCAGAATAAGGTCTTTCTATAGTGATGTTGTCCACCTTCAGGGTGTAGCAAACAGTTTGGATAAGGATTGTGTTGGAAGAATGGAACCATCCCAGTGTTTCTTTCCTCAAGAATTTATCAAGAACATAAAAACCCCAGTTTTCCTTGTCAACCCAGCTTATGATTTTTGGCAGATTCAATATGTTTTGATACCAGCTGAATCAGATCCTTCTGGCAAATGGGCAAAATGCAGACTGAGCATTCAGAAGTGTAGTCCTGCCCAGATTGAAATTCTACATGGTTTCCGAAATTCTATGCTAAAGACACTGAGTGAGTTCCAACAAAACAAGGATGGAGGCATGTTTATAAACTCTTGCTTTAGTCACTGCCAAACATTGATGACTGAGACATGGCATTCTCCTTATTCTCCCAGGATCAACAATAAGACCATTGCAGAATCTGTAGGTGACTGGTACTTCAACCGAAAATTAGTGAAGCAAATTGATTGCCCTTATCCATGTAATCCTACTTGTTCTAACATGGACTTTACTTGGCATCGATGA 1245 42.73 MANPRLRLLLPWRKFSKRDWAIAAFGFTIFFFALSFTSTKTIAPLDLVDLTLVRHAKDKGAVCLDGSAPGYHFRSGFGSGSNNWVLHIEGGGWCNTVASCLIRKTTALGSSNYMERQVRFSGILSHDSSQNPDFFDWNKVKLRYCDGASFAGNSQKNETQLFFRGQRIWEAVMDELLSIGLSNAKQVLLSGCSAGGLATLIHCDDFRGILPKDATVKCLADAGFFLDEKDVTGNRRIRSFYSDVVHLQGVANSLDKDCVGRMEPSQCFFPQEFIKNIKTPVFLVNPAYDFWQIQYVLIPAESDPSGKWAKCRLSIQKCSPAQIEILHGFRNSMLKTLSEFQQNKDGGMFINSCFSHCQTLMTETWHSPYSPRINNKTIAESVGDWYFNRKLVKQIDCPYPCNPTCSNMDFTWHR* 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14603029 14610047 + Vvi8g725 Vvi8g725 790948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g725 414 PANTHER NOTUM-RELATED 13 405 IPR004963 GO:0016787
Vvi8g725 414 PANTHER PECTIN ACETYLESTERASE 4 13 405 - -
Vvi8g725 414 SUPERFAMILY alpha/beta-Hydrolases 166 299 IPR029058 -
Vvi8g725 414 Pfam Pectinacetylesterase 47 390 IPR004963 GO:0016787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g725 K19882 - vvi:100244164 864.759