Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g726 ATGCCGCCGCTTGTCAACGCTTCCCATTATCCCGATAAAGTCATATTCAATGTCGGCATCTGCTTCGCCGGTGCCGGAGAAGTTTCCCGGCGCCACGACATCGATATGATTCTGTCGGAGTCTCTGGACGAAGGGCTGGGTCACTCTTTCTGCTACATACGACCTCACCCATGTCGCATCTCTTCCTCCCAAGTCCACACCGAGTATTTCCAAACGACGACGTTTTGCTCCATCTCCGGCGCTTCTGTCAGCGCCAACACTGCCACTCCTCTCTCTACAGCTCTTCTTGATCCGTATTCCTACAACTGCAACCTCGATCGAGCCTCCGCGTTTGAGAGCTCCACCTCCTTCGCTTCAATCCCTCTACAACCGGTTCCGCGCTCCGGTACGCCACCCCGAAATACCGGGGGAGTACCGTCTTCGGGGCCGATTGAAAGAGGGTTCTTATCAGGCCCGATTGAGCGAGGTTTGTATTCGGGTCCGATGGAGAACAGTGGTCAGTTGCAGAGAAGTTTCTCAAATAGTGAATTTGGGTTCAAATCCAAATCCAAGAAGCGAGGTTTGATGAGAAATTTTCGTAAAGCGATTGCGAGTAAATTATCTCGGGGACGTACGGCTGCTGTTGCGCCGATTAAAGGGAAAGAATCTGATTGGGTTGAGAAGAATAATGAGAAATTTAAGAATCTTCAATGGGCACAAGGAAAAGCAGGGGAGGATCGAGTACAAGTGTTGATATCGGAGGAACATGGTTGGGTTTTTGTGGGGATTTATGATGGATTCAATGGTCCTGATGCTACTGATTTCTTGTTATCTAATCTTTACTCTGCTGTGCATAAGGAACTCAAGGGGTTACTATGGAACGATAAGTTCGAATCTGCAGAGCCAGAGAATCACCCATGTGGAAATAGGAACATGAACTTGGAGCTTGATAGGAGATTAAAGCAACAGTCCAACCCTTCCGACCCAGATGGGGCAGCTGCTATTAACCATTCAGAGGTGTTGAAAGCACTGTCCCGGGCATTGAAAAAGACGGAGGAGTCTTATTTGGACATTGCGGACAAGATGGTAATGGAGAATCCTGAGTTATGTCTAATGGGTTCATGTGTTTTGGTGATGTTGATGAAAGGAGAAGATGTTTACTTGATGAATGTGGGTGACAGTCGAGCAGTTCTAGCTCACAAATCTGAACCTCACCTTTGGCTCAGGAAGGCTCACCAGGACTTGGAACGAATCAATGAAGAAACCTTGCATGATCTTGAATCATTCGATGGTGACCAATCTTACGGATTACCCAGTTTAGCTTCCCTTCAGCTCACCATGGATCACAGCACAAATGTGAAAGAGGAATTCGAAAGAATTAAGAATGAACATCCAGATGATGATTCTGCAGTGATAAATGACCGGGTCAAAGGTTCCTTGAAGGTCACTCGTGCTTTTGGGGCTGGCTTTCTCAAACAGCCAAAATGGAATAATGCACTACTGGAAATGTTCAAAATAGAGTATGTGGGAACCTCCCCTTACCTCTCATGTTCTCCATCACTCTACCACCACAGACTCGGCCTAAAGGATAGGTTCTTGATATTGTCTTCCGATGGACTCTACCAGTACTTCACCAATCAAGAAGCTGTTTCCCAAGTTGAGATGTTCCTTGCTTCATCTCCTGAAGGAGATCCTGCGCAACATCTCATTGAAGAAGTGCTGTTCCGAGCAGCAAAGAAAGCTAGTATGGACTTTCATGAGTTGCTAGACATCCCACAGGGAGATCGACGTCGGTACCACGATGACTTGTCCATCATCGTTATTTCTCTGGAAGGAAGGATATGGCGTTCATCTGTGTAA 1839 46.93 MPPLVNASHYPDKVIFNVGICFAGAGEVSRRHDIDMILSESLDEGLGHSFCYIRPHPCRISSSQVHTEYFQTTTFCSISGASVSANTATPLSTALLDPYSYNCNLDRASAFESSTSFASIPLQPVPRSGTPPRNTGGVPSSGPIERGFLSGPIERGLYSGPMENSGQLQRSFSNSEFGFKSKSKKRGLMRNFRKAIASKLSRGRTAAVAPIKGKESDWVEKNNEKFKNLQWAQGKAGEDRVQVLISEEHGWVFVGIYDGFNGPDATDFLLSNLYSAVHKELKGLLWNDKFESAEPENHPCGNRNMNLELDRRLKQQSNPSDPDGAAAINHSEVLKALSRALKKTEESYLDIADKMVMENPELCLMGSCVLVMLMKGEDVYLMNVGDSRAVLAHKSEPHLWLRKAHQDLERINEETLHDLESFDGDQSYGLPSLASLQLTMDHSTNVKEEFERIKNEHPDDDSAVINDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFKIEYVGTSPYLSCSPSLYHHRLGLKDRFLILSSDGLYQYFTNQEAVSQVEMFLASSPEGDPAQHLIEEVLFRAAKKASMDFHELLDIPQGDRRRYHDDLSIIVISLEGRIWRSSV* 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 14615671 14618320 - Vvi8g726 Vvi8g726 790949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g726 612 MobiDBLite consensus disorder prediction 122 144 - -
Vvi8g726 612 MobiDBLite consensus disorder prediction 122 137 - -
Vvi8g726 612 CDD PP2Cc 235 603 IPR001932 -
Vvi8g726 612 PANTHER PROTEIN PHOSPHATASE 2C 30 612 IPR015655 GO:0004722|GO:0006470
Vvi8g726 612 Pfam Protein phosphatase 2C 334 575 IPR001932 -
Vvi8g726 612 ProSiteProfiles PPM-type phosphatase domain profile. 222 603 IPR001932 -
Vvi8g726 612 SUPERFAMILY PP2C-like 235 604 IPR036457 -
Vvi8g726 612 SMART PP2C_4 220 601 IPR001932 -
Vvi8g726 612 PANTHER PROTEIN PHOSPHATASE 2C 23-RELATED 30 612 - -
Vvi8g726 612 Gene3D - 202 609 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g436 Vvi8g726 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g726 - - vvi:100244361 1148.27