Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g769 ATGCTAGTTGCATTGTGGCTGGTAGTGGAGTTAGAAAATTTTGGAGTGCCAAAAACAAGGAAAAACACATTTAAGCTGGGCCGAATATTAAACCTATGTTTGATTAAAATTATGGGAACCGATTGGAGGAGGAGGACGAAGACTCTGACCATGTATCTGAGACTAGTGACTCTGCTCTTCCTCCTGGCAAGCTTAGCCTCAGGGGAAGATGTGAGTTTCACCTACAATGGATTCCAAACGGCGGCCAACCTGAGCCTTGATGGCTTAGCCCAGTTCACACCCAATGGTCTGCTGATCCTCACCAACCGCACCAAACAGGAAACTGGTCACGCCTTCTACTCACATCCCATGAGATTCAAGAATTCCTCCAACGCCCCTGCTTTTTCCTTCTCTACTACATTTGTGTTCGCCATCCATCCTCAATATCCGACTCTTAGCGGTCACGGGATTGCTTTCGTCATTGCACCCACAAGAGGCCTCCCGGGAGCTCTTCCCAGCCAACATCTAGGCCTCTTTTCCGATGCCAACAATGGCAATTCCACCAATCACATCGTGGCTGTAGAGCTTGATACCATCCAGAACGAGGAGTTGGGTGATATCAATGACAACCATGTTGGAATTGATATCAACGGGTTGAAGTCTGACAAAGCTGCTCCAGCAGGTTATTTTGCTAGCAAGAATGGAGATTTTAAAAACTTGAGCCTTATTAGTGGCCGACCCATGCAAGTGTGGGTGGACTATAACGCCTTGGAGAAGCAAATTGATGTGAGATTGGCTCCAGTCAGTGTTGATAAACCTGATATTCCGCTGCTGTCCTTGCCCCGCGATCTTTCTCTAATCCTTAACAATACCATGTATGTTGGCTTCTCATCTTCTACCGGTTCAGTCCTAACATCTCATTATCTTCTGGGATGGAGCTTTAAGATGAATGGTCAGGCTCAACCGCTTGCTATTTCTCAGCTTCCTAAGCTTCCCCGCATAGGAGGACAGAAGAAATCCGCATTCCTGACAAGTGGGTTGCCAGTGATTTGTGTAGTTTCTATTTTAGCAGTGATGTCAGGGGCAGTTTATCTTATAAGAAGGAAGAAGAAGTTCGCGGAAGAGCTTGAAGATTGGGAACTTGATTATGGGCCTCACAGATTCAAATACAAGGATCTGTATTTTGCAACCAAAGGGTTCAAGGACAAAGAGCTATTGGGGAGCGGGGGATTTGGCAGGGTCTATAGAGGTGTATTGCCCACATCAAAACTTGAGATTGCATACCTCTATGACCAACCCAAGGTCACCCTCAATTGGAACCAAAGATTCAGAGTTCTCAAAGGTGTAGCATCTGGGTTGTCCTATCTACACGGAGAATGGGAGCAAGTCGTGGTTCACAGAGATCACACTAGAACCGGCAAGGCCACAACAAGGACTGATGTCTATGCTTTTGGCGCCTTTCTGCTTGAGGTTGCTTGCGGAAGAAGGCCGATAGCTCCAATGGAGGATCTCATCTTGGTTGATTGGGTGTTTTTTTTCTGGAACAGAGGTGAAATCCTTCAGGCAAGTGATCCAAAATTGGGTGTTGATTATAATGCAGAGGAAATGGAGTTGGTATTGAAGCTTGGCTTGATGTGCTCTCATTCAGAACCAAATGCTAGGCCAAGCATGCCACAAGTTGTACAGTACTTGGAGAGGACAGTTCCTTTGCCAGAGTTTACATCCCTGGGTCTTTCTGCCAATGGCCTATCATTTGCCCATCGTGAAGGTTTTGATGATTTTGCTTTGTCATATCCATTCTCTTTGGATAAGACATTCTCCCATGCATCCACTAATGACGTAAATTTCACTTTCCTGGCTTCAAGACTTTTCTCATAA 1857 45.77 MLVALWLVVELENFGVPKTRKNTFKLGRILNLCLIKIMGTDWRRRTKTLTMYLRLVTLLFLLASLASGEDVSFTYNGFQTAANLSLDGLAQFTPNGLLILTNRTKQETGHAFYSHPMRFKNSSNAPAFSFSTTFVFAIHPQYPTLSGHGIAFVIAPTRGLPGALPSQHLGLFSDANNGNSTNHIVAVELDTIQNEELGDINDNHVGIDINGLKSDKAAPAGYFASKNGDFKNLSLISGRPMQVWVDYNALEKQIDVRLAPVSVDKPDIPLLSLPRDLSLILNNTMYVGFSSSTGSVLTSHYLLGWSFKMNGQAQPLAISQLPKLPRIGGQKKSAFLTSGLPVICVVSILAVMSGAVYLIRRKKKFAEELEDWELDYGPHRFKYKDLYFATKGFKDKELLGSGGFGRVYRGVLPTSKLEIAYLYDQPKVTLNWNQRFRVLKGVASGLSYLHGEWEQVVVHRDHTRTGKATTRTDVYAFGAFLLEVACGRRPIAPMEDLILVDWVFFFWNRGEILQASDPKLGVDYNAEEMELVLKLGLMCSHSEPNARPSMPQVVQYLERTVPLPEFTSLGLSANGLSFAHREGFDDFALSYPFSLDKTFSHASTNDVNFTFLASRLFS* 619
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 14993067 14998474 - Vvi8g769 Vvi8g769 790992
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g769 618 ProSitePatterns Legume lectins beta-chain signature. 185 191 IPR019825 -
Vvi8g769 618 Gene3D Transferase(Phosphotransferase) domain 1 463 569 - -
Vvi8g769 618 CDD lectin_legume_LecRK_Arcelin_ConA 71 311 IPR001220 GO:0030246
Vvi8g769 618 Pfam Legume lectin domain 71 322 IPR001220 GO:0030246
Vvi8g769 618 PANTHER - 421 461 - -
Vvi8g769 618 PANTHER - 54 420 - -
Vvi8g769 618 PANTHER - 461 605 - -
Vvi8g769 618 Gene3D Transferase(Phosphotransferase) domain 1 422 462 - -
Vvi8g769 618 Gene3D - 69 320 - -
Vvi8g769 618 Gene3D Phosphorylase Kinase; domain 1 355 421 - -
Vvi8g769 618 SUPERFAMILY Concanavalin A-like lectins/glucanases 71 327 IPR013320 -
Vvi8g769 618 SUPERFAMILY Protein kinase-like (PK-like) 374 565 IPR011009 -
Vvi8g769 618 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 54 420 - -
Vvi8g769 618 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 461 605 - -
Vvi8g769 618 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 421 461 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Vvi8g769 Vvi13g330 ECH
Vvi6g491 Vvi8g769 ECH
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g769 - - vvi:100854743 740.339