Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g771 ATGTCCAAAGTTTTGTCCCCAAAGTCAAGTTACATCCTTGTGATGGCCACTTCTCTCACGATCTTACTTGCTATTGTTTTTCTCCTTTCAACCCCAGTTACATCCCAGGTGGATGAGATCTTCTATGGTGGATTCAGTGATGTTGGTGCCAACCTAACCAAAACCGGAGTTGCAGAGATTGACAAGGATGGTATTCTTCGATTGACAAACGAGACCAGTAGATTAATGGGTCATGCTTTTCACTCCTTTCCTCTTCAGTTCAAGAACTCCACCAATGGAACCGCTTTCTCTTTCTCTACCTCCTTCGCTTTCGCCATCGTTCCCGAGTATCCCAAGCTTGGCGGCCATGGCTTCGCTTTCGCAATTTCGCCATCTAAGGAGCTAAGAGGCGCTCTTCCCAGTCAATATCTGGGACTCCTTAATGCTAGTGATATTGGCAACTTTTCTAACCACCTCTTCGCCGTCGAATTCGACACAGTTAAGGACTTTGAGTTTGAAGACATCAACGACAACCACAGTGGGAACACGATTCAGGCATGGATTGATTATGATTCAGTAGGCAATGTTCTCAATGTGACGCTCTCGCCTTCTTCTTCCAAACCCAAATTGCCAATTTTGTCTTTCCCCTTGGATCTTTCGCCAATTCTCCAAGAATTCATGTATGTTGGCTTCTCTGCCTCTACTGGAAAATCAGGAACGCAGATGTCATCGAGGCATGGGAGCTCGATATTGGCCCTCATAGATTCTCCTACCAAGAACTCAAGAAAGCCACCAAAGGATTCAGAGACAAGGAGCTACTTGGGCATGGCGGATTCGGCCGAGTTTACAGAGGAACGTTGCCTAATTCCCAGACCCAAATTGCTGTACGGAAACCTCATGCTCCTCTCAAGAACAGGGAAGGCCACAACCAACTCCGATGTGTTTGCGTTTGGTGCTCTACTGCTTGAGGTAACATGTGGACGCAGACCCATTGAGGCTAAAGCTCTGCCTGAAGAGCTGGTTTTGGTGGATTGGGTGTGGGACAAGTGGACAGAAGGGAGGATTCTTGAAGCTGTGGACTCCACATTAACTGGCCAATACGACGAGGGCGAGGTGGTGATGGTCTTGAAATTAGGGTTGTTGTGTTCCAGCTATTCACCCACCGCACGTCCCAGCATGAGGCAGGTGGTGAGATATCTAGAGGGAGAGAAAGATCATATTAAGAATTATTTCAGAATTGATCCAAAACTTCGACTTGTTCAACCAAAATCATGCAGCTTTGTCGTTTTATTTACTCTAGAACAAATTCAGGTTGTGATTGTCTCTGATCACAGAAATAAGTTTTTACCAATTTACCTAAATTTCCTCTTTTCCTTTAGTCAACCACAGGACCTTGAATTTCTAGCAAAATGGAACATACTCATGGCTTTAGTCTATAATATTCCCTTCTTTAACTCCATGACTGAATCGTCGGTACTTGATGAGATCATGGCACCAAAGTCCTGCATCATGGGCTCCTTTTCCTTTAGAAAAATAGCATAG 1521 45.04 MSKVLSPKSSYILVMATSLTILLAIVFLLSTPVTSQVDEIFYGGFSDVGANLTKTGVAEIDKDGILRLTNETSRLMGHAFHSFPLQFKNSTNGTAFSFSTSFAFAIVPEYPKLGGHGFAFAISPSKELRGALPSQYLGLLNASDIGNFSNHLFAVEFDTVKDFEFEDINDNHSGNTIQAWIDYDSVGNVLNVTLSPSSSKPKLPILSFPLDLSPILQEFMYVGFSASTGKSGTQMSSRHGSSILALIDSPTKNSRKPPKDSETRSYLGMADSAEFTEERCLIPRPKLLYGNLMLLSRTGKATTNSDVFAFGALLLEVTCGRRPIEAKALPEELVLVDWVWDKWTEGRILEAVDSTLTGQYDEGEVVMVLKLGLLCSSYSPTARPSMRQVVRYLEGEKDHIKNYFRIDPKLRLVQPKSCSFVVLFTLEQIQVVIVSDHRNKFLPIYLNFLFSFSQPQDLEFLAKWNILMALVYNIPFFNSMTESSVLDEIMAPKSCIMGSFSFRKIA* 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15000529 15007709 - Vvi8g771 Vvi8g771 790994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g771 506 Gene3D - 40 173 - -
Vvi8g771 506 PANTHER - 295 405 - -
Vvi8g771 506 PANTHER - 173 231 - -
Vvi8g771 506 PANTHER - 18 174 - -
Vvi8g771 506 CDD lectin_legume_LecRK_Arcelin_ConA 42 234 IPR001220 GO:0030246
Vvi8g771 506 SUPERFAMILY Protein kinase-like (PK-like) 298 416 IPR011009 -
Vvi8g771 506 Pfam Legume lectin domain 42 174 IPR001220 GO:0030246
Vvi8g771 506 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 231 IPR013320 -
Vvi8g771 506 Gene3D Transferase(Phosphotransferase) domain 1 267 406 - -
Vvi8g771 506 Gene3D - 174 245 - -
Vvi8g771 506 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 173 231 - -
Vvi8g771 506 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 18 174 - -
Vvi8g771 506 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 295 405 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g491 Vvi8g771 ECH
Vvi8g771 Vvi13g330 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g771 - - vvi:104880167 385.956