Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g773 ATGAAGGCAACCATTTCCATCCTTCTTTTGGCTCTATTCTTCACCCTTAACCATTCTCAAGCTTCGCTACGCATACCCCATTTCAACAACTCAACAGATCAAGATGTCCTCCTTTCCTTCAAGGCCCAAGTAACCAAGGATCCAAACGGGGTTTTAGATACTTGGAAGCCAAACACATCTTTTTGCAATTGGCATGGAGTCCTCTGCAATCCCATGAAGAACAGAGTTACTGGTCTTACTCTTAGAAACCTTACCCTTGCAGGAACAATTACTTCTTATATCGCCAATCTCTCCTTCCTACGTCGTCTTGACTTGCAAGAGAATAGTTTTCATGGTACCATTCCCATAGACTTTGGCAGGCTTTTTCGCCTAGTCATTGATCTTTCAGATAACCAGCTCCAAGGAACAATTCCATCAGAATTAGGTAATCTACTAGAGCTTCAAGATTTGAGTTTTGCAAAGAATAATCTTTCAGGGAACATCCCTTCCTCTCTTGGCAACTGTTCTTCTCTTAACAACCTCATCTTATTGTCAAATAACCTCCAGGGGACAATTCCCACTGAATTGGCCCATCTCAGTCTTCTTCTACAGCTGAACTTAGGGAACAACAATCTTTCAGTTATGGGACAAAACCATTTTGAGGGAAACATACCTGAAGGAGTTGGGAACCTGAGGAGTCTTATTCAGTTATCCATGGAAGAAAATGTCTTAACCGGACACATTCCTTCTACAATTGGAAACCTTCAAAACCTACAAAGCTTGATTTTAGACTCCAACTATTTGTCAGGTTCAATACCTGAATCATTGGGAAACCTGACTCAATTGTATGAGCTGGGTTTGAGTGGGAACAATATTACAGGGAGAATTCCTTCAAGCCTTTCAAGTTACATCTCCAACAACAGGCTTTCAGGAGCAATTCCAACAACAGTTGGGCTAAGAGGTATAGAATATATTGATCTTTCAACTAATAATTTGTCTGCCTTGATTCCTTCACTTGGTACCCTTAAGTACCTCCAACTATTGAATCTCTCTGCTAATAAGCTTCAAGGGGAGGGTCCTCCCAGATTGTACTCCTACTATGTCCTGAAATCTGCAACAAATAATTTCAGTAGTGAGAACTTGATTGGGGAAGGGAGTTTTGGCTGTGTCTACAGGGGAGTTATGAGAGATGGGACTTTGGCTGCTGTGAAAGTCTTTAACATGGACCAACATGGAGCTTCCAGAAGCTTTCTAGCCGAGTGTGAAGCCCTTAGATATGTTCGGCATCGGAACCTAGTAAAGATCCTGAGTGCTTGCTCATCTCCAACATTCAAGGCTCTGGTGTTGCAATTCATGCCGAACGGAAGCTTGGAGAAGTGGCTTCACCATGGGGGGGAAGATGGAAGACAAAGGCTTAATCTAAAGCAGAGAATGGACATTGTCGTCGAGGTCGCATCTGCAATGGAGTATCTCCATCACAACTGCGAAACCCCAGTGGTGCACTGTGATCTCAAGCCAAGTAATGTCCTCCTGGATCAAGACATGACTGCTCATGTGGGGGACTTCGGACTTGCAAGGATACTTCATGGAGCTGCATCCGATCATCAAATCAGTAGCACTCTCGGCTTAAAAGGATCAATAGGCTATATTGCACCAGAGTACGGTTTGGGGGGCGGTGTGTCCACAAAGGGCGATGTGTATTGTTTTGGAATACTTGTGCTGGAGATGTTTACAGGAAAGAAACCAACCCAGGAGATGTTCAGCGGAGAATTTAGTCTTCGAAGGTGGGTGGAAGCAGCCCTTCACGGATGCCAATCAGTTAGCCTGTTATTTTTCCACCAAATAATTGAGGGGATGGACAATGAGAGTATGATAAGCCCCCTTGGTTCCTCTCAACTCATAAGCGTTACGAGAAGCCTCCATTTTGTACGTTACCAACCTACTTCCCCGGGACCCCGAGGCCAAAGCCCACGTCCAACTCACTCAAAGCCTTGTCACGTGCGATAG 1986 44.36 MKATISILLLALFFTLNHSQASLRIPHFNNSTDQDVLLSFKAQVTKDPNGVLDTWKPNTSFCNWHGVLCNPMKNRVTGLTLRNLTLAGTITSYIANLSFLRRLDLQENSFHGTIPIDFGRLFRLVIDLSDNQLQGTIPSELGNLLELQDLSFAKNNLSGNIPSSLGNCSSLNNLILLSNNLQGTIPTELAHLSLLLQLNLGNNNLSVMGQNHFEGNIPEGVGNLRSLIQLSMEENVLTGHIPSTIGNLQNLQSLILDSNYLSGSIPESLGNLTQLYELGLSGNNITGRIPSSLSSYISNNRLSGAIPTTVGLRGIEYIDLSTNNLSALIPSLGTLKYLQLLNLSANKLQGEGPPRLYSYYVLKSATNNFSSENLIGEGSFGCVYRGVMRDGTLAAVKVFNMDQHGASRSFLAECEALRYVRHRNLVKILSACSSPTFKALVLQFMPNGSLEKWLHHGGEDGRQRLNLKQRMDIVVEVASAMEYLHHNCETPVVHCDLKPSNVLLDQDMTAHVGDFGLARILHGAASDHQISSTLGLKGSIGYIAPEYGLGGGVSTKGDVYCFGILVLEMFTGKKPTQEMFSGEFSLRRWVEAALHGCQSVSLLFFHQIIEGMDNESMISPLGSSQLISVTRSLHFVRYQPTSPGPRGQSPRPTHSKPCHVR* 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 15011550 15016389 - Vvi8g773 Vvi8g773 790996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g773 661 Gene3D Phosphorylase Kinase; domain 1 360 444 - -
Vvi8g773 661 SMART serkin_6 369 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g773 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 6 124 - -
Vvi8g773 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 358 595 - -
Vvi8g773 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 208 308 - -
Vvi8g773 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 125 206 - -
Vvi8g773 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 296 353 - -
Vvi8g773 661 ProSiteProfiles Protein kinase domain profile. 369 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g773 661 SUPERFAMILY RNI-like 79 358 - -
Vvi8g773 661 Pfam Protein kinase domain 370 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g773 661 Gene3D Transferase(Phosphotransferase) domain 1 445 624 - -
Vvi8g773 661 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 124 - -
Vvi8g773 661 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 296 353 - -
Vvi8g773 661 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 358 595 - -
Vvi8g773 661 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 208 308 - -
Vvi8g773 661 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 125 206 - -
Vvi8g773 661 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Vvi8g773 661 Gene3D Ribonuclease Inhibitor 209 295 IPR032675 -
Vvi8g773 661 MobiDBLite consensus disorder prediction 639 661 - -
Vvi8g773 661 Gene3D Ribonuclease Inhibitor 30 208 IPR032675 -
Vvi8g773 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Vvi8g773 661 SUPERFAMILY Protein kinase-like (PK-like) 352 589 IPR011009 -
Vvi8g773 661 Gene3D Ribonuclease Inhibitor 296 359 IPR032675 -
Vvi8g773 661 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Vvi8g773 661 SMART LRR_typ_2 248 271 IPR003591 -
Vvi8g773 661 SMART LRR_typ_2 192 215 IPR003591 -
Vvi8g773 661 SMART LRR_typ_2 144 168 IPR003591 -
Vvi8g773 661 SMART LRR_typ_2 312 335 IPR003591 -
Vvi8g773 661 SMART LRR_typ_2 97 121 IPR003591 -
Vvi8g773 661 SMART LRR_typ_2 272 300 IPR003591 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76825 PF00069 Pkinase 7.20E-41 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g773 - - vvi:100252877 580.096