Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g784 | ATGGTTTCCACTGAAGAGATTTTGATCGAGAGGCCTAGGGCTCATGGTAGCAAAGCAGAGGAAACCAATACTGTGGGAGGAGATTCCCTGGCACAGCTTACAAAAGGAGGTGCTGTACTCATGGTGTGCAGGACTTGTGGGAAGAAGGGTGATCACTGGACATCCAGGTGTCCTTATAAGGATCTTGCACCACAACCTGAAGCCTTCATTGACAAACCTACTGCATCAGATCCCACTGCTGCGGCTTCTGTAACAAAGGGTGCATATGTTCCACCAAGCATGAGAGCTGGTGCTGATAGAAGCAGTGGTACAGATATGAGGCGCAGGAATGAAGAGAATGCTGTCCGGGTCAGCAATCTCTCAGAGGATACTCATGAGGCTGACTTGCGTGAGCTATTTAGCCGTTTTGGGCAACTAACCCGTGTTTATGTTGCCATTGACCACAAGACTGGTTTGAGCAGAGGTTTTGGGTATGTCAATTTTGTCAACAGGGAAGATGCTGAGAGAGCTATTAGTAAGCTCAATGGATATGGTTATGACAGTCTCATCCTGCAAGTTGAGTGGTCCACACCAAGACCGAACTAG | 585 | 48.03 | MVSTEEILIERPRAHGSKAEETNTVGGDSLAQLTKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGADRSSGTDMRRRNEENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQVEWSTPRPN* | 195 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 15114655 | 15118998 | - | Vvi8g784 | Vvi8g784 | 791007 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g784 | 194 | Gene3D | - | 72 | 194 | IPR012677 | - | |
Vvi8g784 | 194 | SMART | rrm1_1 | 114 | 187 | IPR000504 | GO:0003723 | |
Vvi8g784 | 194 | CDD | RRM_eIF3G_like | 114 | 189 | IPR034240 | - | |
Vvi8g784 | 194 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 1 | 194 | - | - | |
Vvi8g784 | 194 | SUPERFAMILY | RNA-binding domain, RBD | 98 | 193 | IPR035979 | GO:0003676 | |
Vvi8g784 | 194 | MobiDBLite | consensus disorder prediction | 101 | 119 | - | - | |
Vvi8g784 | 194 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 1 | 194 | - | - | |
Vvi8g784 | 194 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 115 | 180 | IPR000504 | GO:0003723 | |
Vvi8g784 | 194 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 113 | 191 | IPR000504 | GO:0003723 | |
Vvi8g784 | 194 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 2 | 62 | IPR024675 | - | |
Vvi8g784 | 194 | MobiDBLite | consensus disorder prediction | 90 | 119 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g784 | K03248 | - | vvi:100242668 | 394.815 |