Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g852 | ATGGACTTAAATGCCTCGCCGCTACCTGAAGAAGATGAAGAGACTTTTGAACGGCATATAGAAGAATACACTGCACCAGAAGAACATGTAGAGACTGCAGTTGAAATTTCGCGCCGGGAGCGCGAAGAAAGACGTAGGCGGCTGAAAAGAGAACGCCCAGATGACAGATCGGTGAATGGACCTTCTGTGCATGATCGACCGTTTCAAACAAGAAATCATAGATCACATGATAGAAATAAGCTCCCCCCTGGTTGGTTGGATTGCCCTGCATTTGGTCAGGAAATCAATTTCATTATTCCTTCTAAGGTGCCTCTCGGTGAATCCTTCAATGACCTTGTCGCTCCTGGTAAAAGATACTCTTCTAGACAAGTGATTCATCAACAGAGAGTTCTAGGAAGAAAACTTGGTTTAGTAATCGATCTGACCAACACCACTCGTTACTATCCATCATCAGATTGGGAGAGAGAAGGTATTAAGCATATCAAGATCGCATGCAAGGGGCGGGATTCTGTACCTGATAATGCAGCTGTAAACTCCTTTGTTTATGAAGTCTCTCAATTTCTTTCTCGTCAGAAACAAACAAAGAAGTATATTCTGGTACATTGTACCCATGGTCATAATCGCACAGGTTATATGATCGTTCATTATCTTATGCGGTCACAGTCAATGTCTGTCACTCAGGCAATAAAAATTTTTGCTGATGCACGTCCTCCAGGAATCTACAAACATGATTATATTGATGGACTGTATGCATTTTATCATGAAAGAAAGCCTGAATTGGTCATTTGTCCTCCAACTCCTGAGTGGAAGAGATCTTCAGATCTTGATCTCAATGGTGAAGCGATGCCTGATGATGATGATGATGGAGTCTCAGCGGCTCCTGGGCATGAAAAGCATGAGGTAGATGTAGTAATGACAAATGACGACAAAATAGGAGATGACATACCTCCTGAGCAGCAGAAGGCACTGCAGCAGTTCTGTTATCAATCACTTAAGTTGCCTGTTGGGGGGCATAGAGGACCCTCGCAATTCCCCGGGTCACACCCAGTTTCACTTAACAGGGATAATCTACAACTGTTAAGACAACGCTATTATTATGCCACATGGAAAGCTGATGGAACTCGATATATGATGCTAATAACTGTGGATGGGTGCTATTTAATTGATAGGACTTTTACATTTCGGAGGGTCCAGATGAGGTTTCCCTGCAAAATTACAAATGATGGTTTTGTCGAAAAGACTCATCATTTTACATTGCTTGATGGGGAGATGATAATCGATACCATGCCAGATTCACAGAAGCAGGAGAGGAGATACCTCATCTATGATCTGATGGCAATTAACCAAGTGTCAGTCATAGAGCGGCCCTTCTATGAAAGGTGGAAGATGCTAGAAAAAGAAGTGATTGAGCCTCGGAATTATGAACGCCAGAATGTTTACCAAAGTAGGAATCCTTATTACAGATATGACTTGGAACCATTCAGGGTGAGAAGGAAGGATTTTTGGTTGCTGTCTACTGTTACCAAGCTTCTAAAGGAATTCATTCCAAGACTTTCACATGATGCAGATGGTCTTATTTTTCAGGGTTGGGATGATCCTTATATTCCCCGTACACATGAAGGCCTCTTAAAGTGGAAATACGCTAACATGAACTCAGTCGACTTTCTATTTAAGATGAGTGCTGATAATCATCCACAGCTTTTTCTGAATGAACGAGGGAAAGAGAAACTGATGGAAGGGAACCGGGTTTCATTTAAAGATGGTTTAGATCCCTCTTCATATCATGGAAAAATTATCGAGTGTTCTTGGGATTTTGATGCAAGAGAATGGAGCTTTATGCGGGTCAGAATTGATAAATCAACCCCAAATGAGTTTGGAACATACATGAAGGTGATGCGAAGCATAAGGGACAATATTACAGAAGAAGTGCTGTTAACTGAGATTCGCGAAATAGTTCGCTTGCCTATGTATGCTGATAGGATATGGAATGATAGCAAAGCCCACCAGCATACAAATGCAGCACGACGTAGGTGA | 2034 | 41.94 | MDLNASPLPEEDEETFERHIEEYTAPEEHVETAVEISRREREERRRRLKRERPDDRSVNGPSVHDRPFQTRNHRSHDRNKLPPGWLDCPAFGQEINFIIPSKVPLGESFNDLVAPGKRYSSRQVIHQQRVLGRKLGLVIDLTNTTRYYPSSDWEREGIKHIKIACKGRDSVPDNAAVNSFVYEVSQFLSRQKQTKKYILVHCTHGHNRTGYMIVHYLMRSQSMSVTQAIKIFADARPPGIYKHDYIDGLYAFYHERKPELVICPPTPEWKRSSDLDLNGEAMPDDDDDGVSAAPGHEKHEVDVVMTNDDKIGDDIPPEQQKALQQFCYQSLKLPVGGHRGPSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITVDGCYLIDRTFTFRRVQMRFPCKITNDGFVEKTHHFTLLDGEMIIDTMPDSQKQERRYLIYDLMAINQVSVIERPFYERWKMLEKEVIEPRNYERQNVYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDPYIPRTHEGLLKWKYANMNSVDFLFKMSADNHPQLFLNERGKEKLMEGNRVSFKDGLDPSSYHGKIIECSWDFDAREWSFMRVRIDKSTPNEFGTYMKVMRSIRDNITEEVLLTEIREIVRLPMYADRIWNDSKAHQHTNAARRR* | 678 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 15836616 | 15865946 | + | Vvi8g852 | Vvi8g852 | 791075 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g852 | 677 | Pfam | mRNA capping enzyme, catalytic domain | 348 | 546 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Vvi8g852 | 677 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 178 | 247 | IPR000387 | GO:0016311|GO:0016791 | |
Vvi8g852 | 677 | CDD | RNA_5'-triphosphatase | 84 | 250 | - | - | |
Vvi8g852 | 677 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 108 | 259 | IPR020422 | GO:0006470|GO:0008138 | |
Vvi8g852 | 677 | Pfam | mRNA capping enzyme, C-terminal domain | 550 | 645 | IPR013846 | - | |
Vvi8g852 | 677 | Gene3D | Protein tyrosine phosphatase superfamily | 59 | 276 | IPR029021 | - | |
Vvi8g852 | 677 | CDD | Adenylation_mRNA_capping | 318 | 547 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Vvi8g852 | 677 | MobiDBLite | consensus disorder prediction | 21 | 82 | - | - | |
Vvi8g852 | 677 | Pfam | Dual specificity phosphatase, catalytic domain | 134 | 253 | IPR000340 | GO:0008138|GO:0016311 | |
Vvi8g852 | 677 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 80 | 270 | IPR029021 | - | |
Vvi8g852 | 677 | Gene3D | DNA ligase/mRNA capping enzyme | 300 | 544 | - | - | |
Vvi8g852 | 677 | MobiDBLite | consensus disorder prediction | 277 | 297 | - | - | |
Vvi8g852 | 677 | Gene3D | - | 545 | 654 | IPR012340 | - | |
Vvi8g852 | 677 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 200 | 210 | IPR016130 | GO:0016311|GO:0016791 | |
Vvi8g852 | 677 | PANTHER | MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED | 1 | 677 | - | - | |
Vvi8g852 | 677 | PIRSF | mRNA_capping_HCE | 68 | 677 | IPR017074 | GO:0004484|GO:0006370|GO:0140818 | |
Vvi8g852 | 677 | SUPERFAMILY | DNA ligase/mRNA capping enzyme, catalytic domain | 340 | 547 | - | - | |
Vvi8g852 | 677 | SUPERFAMILY | Nucleic acid-binding proteins | 549 | 661 | IPR012340 | - | |
Vvi8g852 | 677 | PANTHER | MRNA-CAPPING ENZYME | 1 | 677 | - | - | |
Vvi8g852 | 677 | SMART | dsp_5 | 109 | 255 | IPR020422 | GO:0006470|GO:0008138 | |
Vvi8g852 | 677 | MobiDBLite | consensus disorder prediction | 21 | 81 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g852 | K13917 | - | vvi:100256199 | 1375.53 |