Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g903 ATGGGTGTTCCTCAGGCCATGCAAACCCTAAGCGAGAGAGCAGCATTCACGAGGGAGTCTCTGCAAAAGAGCCAGACCATCACGGATAGTATGGTCGCCATTCTCGGCTCCTTCGACCACCGCCTCTCCGCTCTCGAAACCGCCATGCGTCCCACTCAGATAAGGACGCATTCGATTAGGAAGGCCCATGAGAATATAGATAAGACACTGAAGGCGGCTGAATTGATACTGGCCCAATTTGATCTCACCCGCAAGGCGGAGGCTAAAATACTGAGAGGGCCACACGAGGATCTAGAAAGTTACCTAGAAGCAATGGATCAACTGAGAAGCATTGTTCATTTTTTCAACTGTAACAAAAGTTATAAGAGCAATGCTGGAGTGCTTAATCATGTCAATAACTTACTTGCAAAAGCTAACTTAAAGATAGAAGAGGAGTTTAGACAGCTCTTGACATCTTACAGCAAACCAGTGGAACCTGATCGCCTTTTTGATTGCCTCCCCCACTCTCTACGACCATCATCAGGGTCTCCTGGGCATCAGGGTGAAGCTACTGGCAAGAATCCTTCTTCTACCAATCACTCTGAGCACAACAAAAGCTTAGAAACTGCTGTTTACACTGCTCCAACTCTTATTCCACCCAGGATTCTGCCATTGCTGCACGATTTAGCCCAACAAATGAGTCAAGCTGGTCACCAACAACAACTCTACAAAATTTATAGAGAAACCCGTGCTTCAGCTTTGGAACAGAGTCTCAGGAAATTAGGTGTGGAAAAACTTACTAAAGATGATGTCCAGAAGATGCAGTGGGAAGTTTTGGAGGCTAAGATTGGAAATTGGATTCATTTCATGCGGATTGCTGTCAAATTGCTATTTTCTGGGGAAAAGAAAGTCTGTGGTCAAATATTTGATGGTGTTGATTCTCTCAGGGATCAATGTTTTGCAGAAGTTACTGCAAACAGTGTAGCTGTGCTCCTTAGTTTTGGAGATGCTATTGCCAAAAGCAAGAGGTCCCCTGAAAAATTATTTGTTCTCTTAGACATGTATGAGATAATGCGAGAACTGCATTCAGAGATTGAAACAATATTTGAAGGTCAGGCCTGTGTCGAAATGCGGGAATCTTCATTGAGTTTGACAAAGCGGCTAGCTCAGACGGCCCAAGAGACCTTTGGTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGAACTGTGCATCCTTTGACAAGCTATGTAATTAATTACGTGAAGTTTTTATTTGACTATCAATCGACATTAAAGCAACTCTTCCAAGAGTTTGGTGAAGGGGATGCTGATGCTCAATTAGCATCTGTGACAACACAGATTATGCTGGCTCTTCAGAATAACTTGGATGGGAAATCCAAGCAATATAAAGATCCTGCATTGACTCAATTATTTCTTATGAATAACATTCACTACATTGTCAGATCAGTGCGAAGGTCAGAAGCAAAGGATTTGTTGGGGGATGATTGGGTGCAAATACACCGAAGGATTGTACAGCAGCATGCAAACCAGTATAAGAGGGTATCTTGGGCAAAGATTCTGCAGTGTCTGTCCATTCAAGGTGCTGCTTCATCAGGTGGTGGTGGTGCGATTGCAGAAGCTGGTAGCGGCAGTGGAGTTTCAAGAGCGATGGTGAAAGACAGGTACAAGACCTTCAACATCCAGTTTGAGGAGCTTCATCAAAGGCAATCTCAATGGACAGTTCCAGACAGTGAGTTGCGAGAGTCATTGAGGCTGGCAGTTGCTGAAGTTCTCCTACCTGCCTACAGATCTTTCATTAAACGTTTTGGGCCTATGATTGAAAATGGGAAAAACCCGCATAAGTACATCAGATACACTCCTGAGGATCTTGAGCACATGCTGAGTGAATTCTTTGAGGGGAAGACCCTGAATGAACTAAAGCGGTAA 1947 43.91 MGVPQAMQTLSERAAFTRESLQKSQTITDSMVAILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAELILAQFDLTRKAEAKILRGPHEDLESYLEAMDQLRSIVHFFNCNKSYKSNAGVLNHVNNLLAKANLKIEEEFRQLLTSYSKPVEPDRLFDCLPHSLRPSSGSPGHQGEATGKNPSSTNHSEHNKSLETAVYTAPTLIPPRILPLLHDLAQQMSQAGHQQQLYKIYRETRASALEQSLRKLGVEKLTKDDVQKMQWEVLEAKIGNWIHFMRIAVKLLFSGEKKVCGQIFDGVDSLRDQCFAEVTANSVAVLLSFGDAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFEGQACVEMRESSLSLTKRLAQTAQETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFGEGDADAQLASVTTQIMLALQNNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRVSWAKILQCLSIQGAASSGGGGAIAEAGSGSGVSRAMVKDRYKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPHKYIRYTPEDLEHMLSEFFEGKTLNELKR* 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16398019 16406169 + Vvi8g903 Vvi8g903 791126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g903 648 MobiDBLite consensus disorder prediction 173 198 - -
Vvi8g903 648 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 645 - -
Vvi8g903 648 Pfam Exo70 exocyst complex subunit 278 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi8g903 648 Gene3D Exocyst complex component Exo70 74 648 - -
Vvi8g903 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 645 IPR004140 GO:0000145|GO:0006887
Vvi8g903 648 SUPERFAMILY Cullin repeat-like 76 639 IPR016159 -
Vvi8g903 648 MobiDBLite consensus disorder prediction 164 198 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g903 K07195 - vvi:100258036 1240.71