Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1057 ATGGGCGCGCACGCAGCTCTACTTGTGCGCGCGCCAACCCCTTCGCCATTGCCCATTGCGCTTATACTAATCCTCGTATCGATCACTTCTTCTGAGGCCGTCTCCGACGCTGACATTCTCCTGAAGTTCCGGGTGTCTCTAGGCAATGCCACTGCCCTGGGCGACTGGAATACCTCCAGGAGTGTGTGCTCCACCGACCAGACCGAGAGTTGGAACGGTGTGCGCTGTTGGAATGGCAGCGTGTGGGGTCTGCGCCTGGAAGGCTTGGGGCTCAATGGTGCTATAGATTTGGATTCTTTGTCCTCCTTAAGGTATTTGAGGACTATAAGCTTTATGAACAATAGTTTTGAAGGTCCCTTGCCTGAAATCAAGAAACTAGTAGCGTTGAAGTCGGTTTATCTCTCCAACAACCATTTTTCTGGTGACATCCCAGATGATGCTTTCTCTGGTATGGCCTATCTGAAGAAAGTTCACTTGGCGAACAACAAGTTTACGGGGAAAATCCCTTCGTCGCTAGCCACTTTGCCTAGGCTTTTACATTTGGCAAATGTGAACATATCCAACAACATGTTGGGGGGTCCAATCCCAGCTAGCCTGAGCAGGATCAGTTCTAGCTCGTTTTCGGGCAACAAAGATCTATGCGGGAAGCCTCTGGACTCATGCAGCTCCAAGAAGCCATCAGCAGTAATAGTGGCCTTAATTGTGGTAGCCATAGCGCTGATCCTAGTGACCATTGGCTTGCTACTGCTTGTCCTCCACCGCAACATCCGGACAGTCCAACTGGGGGGTGCTGCACCAGTGGACAACCACAGCATGTCGGAAGTTGCCCATAGCTCCCTAGTTGAATGTGGGACATCTGAGATGAGCGGGCACTCGAAGAGGGCTGAACAAGGGAAGTTGACATTTGTGAGGGACGACAGGGAGAGGTTTGATTTGCAGGATTTGTTAAGAGCCTCAGCAGAAGTGTTGGGAAGTGGCAACTTTGGGTCTTCTTACAAGGCTGTGCTCCTCAGTGGTGAAGCCATGGTGGCAAAGAGGTACAAGCAAATGAACAATGTGGGGAGAGAGGAGTTTCAAGAGCATATGAGAAGGCTAGGGAGGTTGGCACATCCAAACTTGCTTCCCCTTGTGGCTTATTACTACAGAAAAGAAGAGAAGCTCTTGGTTTCTGAGTATGTTGAGAATGGTAGCTTGGCTAGTCACCTCCATGGCAATCATTCCATAGATCAACCGGGGCTCAACTGGCCAACACGCTTGAGAATCATCAAGGGAGTAGCTAAGGGCTTGGCTTACCTCTACAATGAGCTCCCCAGCCTAATTACTACGCCCTACTTCCAGTGA 1341 50.41 MGAHAALLVRAPTPSPLPIALILILVSITSSEAVSDADILLKFRVSLGNATALGDWNTSRSVCSTDQTESWNGVRCWNGSVWGLRLEGLGLNGAIDLDSLSSLRYLRTISFMNNSFEGPLPEIKKLVALKSVYLSNNHFSGDIPDDAFSGMAYLKKVHLANNKFTGKIPSSLATLPRLLHLANVNISNNMLGGPIPASLSRISSSSFSGNKDLCGKPLDSCSSKKPSAVIVALIVVAIALILVTIGLLLLVLHRNIRTVQLGGAAPVDNHSMSEVAHSSLVECGTSEMSGHSKRAEQGKLTFVRDDRERFDLQDLLRASAEVLGSGNFGSSYKAVLLSGEAMVAKRYKQMNNVGREEFQEHMRRLGRLAHPNLLPLVAYYYRKEEKLLVSEYVENGSLASHLHGNHSIDQPGLNWPTRLRIIKGVAKGLAYLYNELPSLITTPYFQ* 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 21916349 21918841 - Vvi9g1057 Vvi9g1057 792768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1057 446 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 16 441 - -
Vvi9g1057 446 Pfam Leucine rich repeat N-terminal domain 35 77 IPR013210 -
Vvi9g1057 446 ProSiteProfiles Protein kinase domain profile. 317 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1057 446 Gene3D Transferase(Phosphotransferase) domain 1 393 440 - -
Vvi9g1057 446 SUPERFAMILY L domain-like 63 210 - -
Vvi9g1057 446 Pfam Leucine rich repeat 129 181 IPR001611 GO:0005515
Vvi9g1057 446 Gene3D Ribonuclease Inhibitor 33 223 IPR032675 -
Vvi9g1057 446 SUPERFAMILY Protein kinase-like (PK-like) 321 434 IPR011009 -
Vvi9g1057 446 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 441 - -
Vvi9g1057 446 Gene3D Phosphorylase Kinase; domain 1 283 392 - -
Vvi9g1057 446 Pfam Protein tyrosine and serine/threonine kinase 321 434 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g1057 Vvi11g819 ECH
Vvi4g244 Vvi9g1057 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76836 PF07714 PK_Tyr_Ser-Thr 2.60E-13 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1057 - - vvi:100261499 789.645