Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g1107 ATGTGCCCTAGCCTCCTAGTGTTAATGGGTGTGGCCTTTTTTGGGATCCTCACTCCAATTGCCCACTCCACCACAGTTGCTCCTGATGTCTCTGCCCTCAATGTTATGTATAACAGCTTGAACTCTCCTTCACAGCTGACTGGTTGGAAGTCGAGTGGAGGTGATCCTTGTGGGGAATCCTGGAAAGGAATCAAATGCTCGGGCTCATCTATAACTGAAATAAAATTATCTGGCCTTGGACTCACTGGATCGATGGGCTACCAGCTGTCAAGCTTGACATCCGTCACCAACTTTGACATGAGCAAGAACAACCTCAAGGGTGATATACCATATCAACTACCTCCTAATGTACTTCACTTAGATCTTTCTCGAAATGGTTTCACCGGTGGGGTTCCTTATTCGATTTCTCAGATGACTGACCTTAAATATCTAAATCTTGGTCATAATAAACTCAATGGACAGTTAAGTGATATGTTTGGACAACTCCCTAAACTCACTTTGATGGATCTCTCCTTCAATACACTATCAGACAATTTGCCTCAGAGTTTTGGATCACTCTCAAGCCTCACCACATTGCGTTTGCAGAACAATCAATTTACTGGTTCAATAAATGTCCTTGCTGACCTTCCCCTCAATGATTTGAATATTGAAAACAACCAATTTACTGGCTGGATCCCAAATGCATTGAATAATATAGATAATATAGAGGCTGGGGGAAATTCCTGGTCATCTGAGCAAGCTCCTCCACCTCCCCCTGGTGCAAGTTCAAAAAATACTCATGCTAGTAGGAGCTCATCCAACAGTGGAAAAGGTGGTGGGAAGTCTGGCATGAGTGGATTAGCCATTGCTGGAGTAGTTTTGGGAAGTTTGCTGGTACTAGTTATTCTACTTGCTCTATTTTCAAGACGATCTTCTCCTCCTCCTTCACATTTTCTTGATGAAGAGAGGCTTAGCAATCATAGACCATTTACCCCGATTGTATCCCAGGAGTTATCCAATGACATGCATCCCACAAACTACAATGGTAATTTTCATTTACACCTGTACTTTAAGTCGTCGAACTCATCTAATTCAATGGATGTAAAGGCTTTGCAAAAATCTCCTTCTATTGGTCTTAAGCGTCCACCTTCTCTTAATGATTTGGCAAATCGCTTGAGTGTCAAAAGAAGTACTTCTATTCGTGCTACAGCTTATTCCTTGGCGGATTTACAGAGTGCCACTAGAAACTTTGCAACAGCCAGCCTTCTTGGTGAGGGATCTGTTGGGCGTGTTTATAAGGCAAAGTATGCTGACGGAAAGGTGTTGGCTGTAAAAAAGATAAGCTCCTCCTTTTTCCAAAGTGGCCAGAAGCAAGGTTTTCCTGAAGTTGTTTCAAGTGTCTCCAAGCTTCGCCATCCAAATATTGCTGAAATTGTTGGTTATTGTTCAGAACAAGGGCATAACATGTTAATGTATGAGTATTTCAGAAATGGCTCACTACATCAGTTCTTACACCTGTCAGATGATTTCAGCAGACCACTTACTTGGAACACCAGAGTCAAAATTGCTCTTGGCACAGCCCGGGCTATTGAGTACCTCCATGAGGTTTGCTCTCCACCCATGGTTCACAAGAACATCAAGTCTTCTAATATCTTGCTTGATGCTGAACTCAATCCCCATCTCTCTGACTATGGGTTTGCTGCTTGTCATCAGCATACGAGCCAAAACCTAGGGGTTGGATATAATGCTCCAGAATGCACAAAGCCTTTGGCTTATACGTTGAAGAGTGATGTTTATAGTTTTGGAGTAGTCATGTTGGAGGTAATGACAGGTCGGATGCCTTTTGACAGTTCAAGACCAAGATCGGAACAATGCCTTGTCCGATGGGCCACCCCACAGCTCCATGAAATTGATTCACTAGAACAAATGGTGGACCCTGCTTTGCGTGGTTTGTACCCTCCTAAGTCACTCTCTCGATTTGCAGATATCATTGCTCTCTGTGTACAGATGGAGCCTGACTTCCGGCCAGCCATGTCAGAGGTGGTGCAGAGTTTAGCTCGATTGATTCAAGGGGCTTCTCGTCGGATGGAAGACTTCAACTATTGA 2085 43.55 MCPSLLVLMGVAFFGILTPIAHSTTVAPDVSALNVMYNSLNSPSQLTGWKSSGGDPCGESWKGIKCSGSSITEIKLSGLGLTGSMGYQLSSLTSVTNFDMSKNNLKGDIPYQLPPNVLHLDLSRNGFTGGVPYSISQMTDLKYLNLGHNKLNGQLSDMFGQLPKLTLMDLSFNTLSDNLPQSFGSLSSLTTLRLQNNQFTGSINVLADLPLNDLNIENNQFTGWIPNALNNIDNIEAGGNSWSSEQAPPPPPGASSKNTHASRSSSNSGKGGGKSGMSGLAIAGVVLGSLLVLVILLALFSRRSSPPPSHFLDEERLSNHRPFTPIVSQELSNDMHPTNYNGNFHLHLYFKSSNSSNSMDVKALQKSPSIGLKRPPSLNDLANRLSVKRSTSIRATAYSLADLQSATRNFATASLLGEGSVGRVYKAKYADGKVLAVKKISSSFFQSGQKQGFPEVVSSVSKLRHPNIAEIVGYCSEQGHNMLMYEYFRNGSLHQFLHLSDDFSRPLTWNTRVKIALGTARAIEYLHEVCSPPMVHKNIKSSNILLDAELNPHLSDYGFAACHQHTSQNLGVGYNAPECTKPLAYTLKSDVYSFGVVMLEVMTGRMPFDSSRPRSEQCLVRWATPQLHEIDSLEQMVDPALRGLYPPKSLSRFADIIALCVQMEPDFRPAMSEVVQSLARLIQGASRRMEDFNY* 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 22579544 22596265 - Vvi9g1107 Vvi9g1107 792818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g1107 694 SMART serkin_6 410 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1107 694 Pfam Protein tyrosine and serine/threonine kinase 414 678 IPR001245 GO:0004672|GO:0006468
Vvi9g1107 694 Gene3D Transferase(Phosphotransferase) domain 1 488 692 - -
Vvi9g1107 694 PANTHER OS01G0253100 PROTEIN 17 690 IPR045271 GO:0004714|GO:0006468
Vvi9g1107 694 MobiDBLite consensus disorder prediction 256 273 - -
Vvi9g1107 694 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 17 690 - -
Vvi9g1107 694 SUPERFAMILY L domain-like 25 235 - -
Vvi9g1107 694 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Vvi9g1107 694 ProSiteProfiles Protein kinase domain profile. 410 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g1107 694 Gene3D Phosphorylase Kinase; domain 1 378 487 - -
Vvi9g1107 694 SUPERFAMILY Protein kinase-like (PK-like) 390 678 IPR011009 -
Vvi9g1107 694 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Vvi9g1107 694 Gene3D Ribonuclease Inhibitor 26 281 IPR032675 -
Vvi9g1107 694 MobiDBLite consensus disorder prediction 236 274 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76837 PF07714 PK_Tyr_Ser-Thr 2.70E-41 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g1107 - - vvi:100254729 1301.96