Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g134 ATGACACGGGGTAGGATAAGGGCAAAGCTCAGGCAAAGCCATCTTTATACATTCACATGTTTCCGACAAGGTACTGCCGATGCGGAGGCGCCGCATTCATTCGATGGGCCTGGATTCTCACGAATTGTGTATTGTAACCAACCTCAAGTTCACAGCAAGAAGCCCTTGTATTATACCTCAAATAATATATCAACCACAAAATATAATATCATTACCTTTCTGCCCAAGGCTATCTTTGAGCAGTTTCGAAGGGTAGCCAATTTGTACTTTCTTTTGGCTGCAATTTTGTCGCTCACACCAGTTGCGCCGTTCTCTGCTGTGAGCATGATTGCTCCTCTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCCTTGGAAGATTGGCGTAGGTTTATTCAGGATATGAAAGTTAACACCCGGAAAGCTAGCATTCATAAAGGGAATGGTGTATTTGGTTTTAAGCCATGGCAGAGGATTCGTGTTGGGGATGTGGTGAAAGTAAAGAGGTCTTTGGAGGTTACTTTGCCATTGGACGATGATGGGACTTTCAATGATTTCAGAGCAACGATAAAATGTGAAGATCCTAACCCGAGCCTCTACACCTTTGTTGGCAATTTTGAGTATGAGCGTCAGGTTTATCCTCTTGATCCTAGTCAGATCCTCCTCAGAGATTCAAAGCTTAGGAACACGGCTTTTGTGTATGGAGTGGTGATATTTACTGGTCATGATAGCAAAGTCATGCAGAATGCAACACACTCTATTGGATTTGCTAAGCCAGCATTGTCAGGAATTTTCCATCTTGTCACTGCTCTTATACTTTATGGGTATTTAATACCCATCTCACTCTATGTTTCAATTGAAGTTGTGAAGGTCCTGCAAGCAACATTCATTAACCAGGACATACACATGTATGATGAGGAAACTGGGAATACTGCCCAAGCACGGACATCAAATTTGAATGAGGAGCTAGGCCAGGTTGACACAATCCTTTCTGATAAAACTGGCACTCTGACATGCAATCAGATGGATTTTCTCAAGTGTTCGATTGCTGGTTCTGCATATGGTTCTGGTTCTAAAGCAACAGAAATTGAACTGGAGACTGTCGTGACTTCCAAAGATGAGAAGGAACATAAACATGTGATCAAGGGGTTTAGCTTCGAGGACATCCGTCTCATGGGAGGAAATTGGTCAAAAGAGCCCAATGCAGATGTCATTGAATTATTTCTTCGGATACTTGCAGTTTGTCATACTGCAATTCCTGAGCGAAATGAAGAGATTGGGGGCTTTAATTATGAAGCAGAGTCACCAGATGAAGGAAGTTTTCTTGTTGCAGCTCGAGAATTTGGTTTTGAGTTTTGTAAAAGAACGCACACAAGTGTACATGTTCGTGAAAGATATGTTTCTTCTGGACAACCAGTCGAAAGGGAATACCAAATTCTCAATCTGTTGGAGTTCACTAGCAAAAGAAAGCGAATGTCTGTGATTGTGCGGGATGAGGATGGGCAGATTTTTCTCCTTTGCAAGGGTGCAGACAGCATCATCTTTGATCGTTTGGCAAAGAATGGAAGGATGTATGAGGAAGCTACTACTAGGCATCTGAATGAATATGGAGAATCTGGGTTGCGAACATTGGCGCTTGCTTACAAAAAGCTTGAAGAGTCTGAGTATTCTGCTTGGAATAGTGAATTTATGAAAGCAAAAACTTCTATCGGGCCTGATAGAGATGCAATGCTTGAAAGGGTATCAGATGCGATGGAAAGGGAGTTGATCCTTGTTGGTGCAACAGCTGTAGAGGACAAATTGCAAAAAGGGGTGCCTCAGTGCATAGATAAACTGGCACAAGCAGGTCTCAAGCTCTGGGTTCTAACAGGGGATAAGATGGAAACTGCTATCAACATAGGATTTGCATGTAGTTTGCTTCGACAGGGCATGAAGCAGATCTGCATAACTGTGAATCCAGATGTGCAAACCCAAGATGGCAAAGAGGCTGTCAAAGAGAACATTTTGATGCAAATTACCAATGCCTCTCAAATGATCAAGCTAGAAAAAGATCCGCATGCTGCTTTTGCGTTAATTATTGATGGGAAAACTCTAGAACACGCTCTAGCAGATGATATGAAGCATCAATTCCTGGGGCTAGCAGTTGACTGTGCATCTGTCATATGCTGTCGAGTATCTCCTAAGCAAAAGGCATTGGTAACGAGATTAGTAAAAGAAGGAACTGGAAAAACAACTTTAGCAATTGGTGATGGAGCGAATGACGTTGGAATGATTCAAGAAGCTGACATTGGTGTTGGCATCAGTGGGGTGGAAGGTATGCAGGCTGTGATGGCTAGTGACTTCTCGATAGCTCAGTTCCGCTTTTTGGAGAGACTTCTGGTTGTCCATGGCCATTGGTGTTACAAGAGGATTGCTCAGATGATATGCTATTTCTTCTACAAAAATATAGCTTTTGGCCTCACTCTCTTCTACTTTGAGGCATTCACAGGATTTTCTGGGCAATCAGTCTATGACGATTGGTACATGCTACTATTCAATGTTATCCTTACCTCATTGCCTGTCATTTCTCTAGGGGTTTTTGAACAAGACGTTTCTTCTGAAGTTTGTTTACAGTTTCCAGCACTGTATCAACAAGGACCCAGAAACTTGTTCTTCGACTGGTATAGGATATTTGGGTGGATGGGAAATGGTCTCTACACCTCCCTCATCATTTTCTTCCTCAACATTATCATCTTCTATGACCAGGCCTTCCGCTCTGCTGGCCAAACTGCTGATATCCACTTCACATGGATCCAACATCTCTTTGTCTGGGGCAGCATCACCACTTGGTACATCTTTCTCCTACTCTATGGCATGACATCTCCATTATTTTCTGGGACTGCGTACCAAATCCTCGTAGAAGCTCTTGCACCTGCACCAATGTACTGGTGTGCCACTCTCTTAGTAATAGTCACCTGCAATCTCCCTTACCTAGTCCACATATCCTTCCAAAGATCTTTCAACCCCATGGATCACCATATCATCCAAGAGATCAAGTACTACAGGAAAGACGTCGAGGATCAATACATGTGGACTAGGGAGCGGTCTAAAGCCAGACAGGAGACCAAGATCGGATTCTCAGCAAGAGTCGACGCAAAGATCAGGCAGTTGAGGGGGAAGCTGCAAAAGAAGCATTCACCCACAGCCACAAATGTTCAGACACCCTTGTCATAG 3216 43.31 MTRGRIRAKLRQSHLYTFTCFRQGTADAEAPHSFDGPGFSRIVYCNQPQVHSKKPLYYTSNNISTTKYNIITFLPKAIFEQFRRVANLYFLLAAILSLTPVAPFSAVSMIAPLAFVVGLSMAKEALEDWRRFIQDMKVNTRKASIHKGNGVFGFKPWQRIRVGDVVKVKRSLEVTLPLDDDGTFNDFRATIKCEDPNPSLYTFVGNFEYERQVYPLDPSQILLRDSKLRNTAFVYGVVIFTGHDSKVMQNATHSIGFAKPALSGIFHLVTALILYGYLIPISLYVSIEVVKVLQATFINQDIHMYDEETGNTAQARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGSAYGSGSKATEIELETVVTSKDEKEHKHVIKGFSFEDIRLMGGNWSKEPNADVIELFLRILAVCHTAIPERNEEIGGFNYEAESPDEGSFLVAAREFGFEFCKRTHTSVHVRERYVSSGQPVEREYQILNLLEFTSKRKRMSVIVRDEDGQIFLLCKGADSIIFDRLAKNGRMYEEATTRHLNEYGESGLRTLALAYKKLEESEYSAWNSEFMKAKTSIGPDRDAMLERVSDAMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKLWVLTGDKMETAINIGFACSLLRQGMKQICITVNPDVQTQDGKEAVKENILMQITNASQMIKLEKDPHAAFALIIDGKTLEHALADDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYDDWYMLLFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPRNLFFDWYRIFGWMGNGLYTSLIIFFLNIIIFYDQAFRSAGQTADIHFTWIQHLFVWGSITTWYIFLLLYGMTSPLFSGTAYQILVEALAPAPMYWCATLLVIVTCNLPYLVHISFQRSFNPMDHHIIQEIKYYRKDVEDQYMWTRERSKARQETKIGFSARVDAKIRQLRGKLQKKHSPTATNVQTPLS* 1072
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1552172 1558875 + Vvi9g134 Vvi9g134 791845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g134 1071 Pfam Phospholipid-translocating P-type ATPase C-terminal 777 928 IPR032630 -
Vvi9g134 1071 Gene3D - 594 789 IPR023214 -
Vvi9g134 1071 ProSitePatterns E1-E2 ATPases phosphorylation site. 333 339 IPR018303 -
Vvi9g134 1071 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Vvi9g134 1071 PRINTS P-type cation-transporting ATPase superfamily signature 749 768 - -
Vvi9g134 1071 CDD P-type_ATPase_APLT_Dnf-like 60 902 - -
Vvi9g134 1071 Pfam Cation transport ATPase (P-type) 415 519 - -
Vvi9g134 1071 SUPERFAMILY Calcium ATPase, transmembrane domain M 57 997 IPR023298 -
Vvi9g134 1071 SFLD p-type atpase 315 800 IPR044492 -
Vvi9g134 1071 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 166 254 - -
Vvi9g134 1071 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 168 - -
Vvi9g134 1071 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 375 1063 - -
Vvi9g134 1071 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 258 367 - -
Vvi9g134 1071 PANTHER P-TYPE ATPASE, SUBFAMILY IV, HAD-LIKE DOMAIN PROTEIN-RELATED 375 1063 - -
Vvi9g134 1071 PANTHER P-TYPE ATPASE, SUBFAMILY IV, HAD-LIKE DOMAIN PROTEIN-RELATED 166 254 - -
Vvi9g134 1071 PANTHER P-TYPE ATPASE, SUBFAMILY IV, HAD-LIKE DOMAIN PROTEIN-RELATED 258 367 - -
Vvi9g134 1071 PANTHER P-TYPE ATPASE, SUBFAMILY IV, HAD-LIKE DOMAIN PROTEIN-RELATED 1 168 - -
Vvi9g134 1071 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 721 830 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi9g134 1071 Gene3D - 460 593 IPR023299 GO:0000166
Vvi9g134 1071 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 262 1011 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Vvi9g134 1071 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Vvi9g134 1071 SUPERFAMILY HAD-like 319 793 IPR036412 -
Vvi9g134 1071 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 338 555 IPR023299 GO:0000166
Vvi9g134 1071 SFLD C1.7: P-type atpase like 315 800 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g134 K01530 - vvi:100249823 2055.41