Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g141 ATGGCTTCCCAGCAGAACCCACCATTGGAGGATAGCCTTTTCACCACAATCATCGCCATTGACAAGGACAAGAGCAGCCAATACGCCGTCAAATGGGCCGTCGATAACCTCCTGAGCAAGACATCAATTACCACCCTCATTCATGTCCGGAGCGTCAACTCTCAAACCCAAGATGTGAACATGGCACCTAAAGGAGGTCGCCCACCAACTGAAACTGAGATGCAGCAGCTATTCCTTCCTTTCCGTGGATTCTGTGCTCGAAAAGGGATTGAAGCCAAGGAGGTGGTCCTCCATGACCTTGATATTGCAAGTGCACTTGTTGATTATATCAGCAACAACTCAATCGGCAATATTGTTGTCGGGGCTTCAAACCGGAATAGGTGGCATCGGAAATTTAGAAATCCAGATGTCCCAACTTGCTTAGCCAAGTCTGCACCGGAATCCTGTGCAGTATATGTTATATCAAAGGGCAAGATTCAGAGTGTCCGATCAGCAATTCGTTTTCAAACGCCTACTAGCAGTGTATCTAGTGGTGTAACCCAATTTCAAACACCTAAAGGTATGGGGAGCTGGAGAAGTGTAGAGCCAGACAATGGCTTTTTTGATAGGAGCACTGATTCCGTGCAGACGACTCCACGTGACAAGATAATGTCCAGCAGTAAGCTGTTTTCACCCCCTCAATCGAGGGTGAACCTTCACCATCGTCTCCGCATATCAGAGAATTCATCCCATCAAGGTTCTGTATCAGGCTCCAGTAATTATTCAGGGCCCTCCAGCTTGCGATCAAGTAATTCATCCTCTGAGAATTTAGAATTCTCCGGGAGCTCTGGGAGTTCTCTCTCATCACAAACTCAGAATGAGATGGATGCTGAGATGAATAGATTAAAGCTTGAACTAAAGCAATCCATGGATGCGTACAACTCAGCTTCCAAAGAAGCAATGACAGCCACACAGAGACACAGGGCAAGAGATATTCATCAGAGGAAGACAGAGGAAGCACGTAGGTTCCCAGAAGCCAGAATTGGTGAAGAGACAGCTTTAGCTATAGTGGAGTTGGAGAAGCAGAAGAGCAGGAAAGCTATGCAAGCAGCACAAATGGCTCAAAGACTAGCTGAACTGGAAGCGCATAAGAGAAAGAATACTGAACTGAAGGCCAAGCGTGAGGCAGAAGCGAGTGGAAGAGCAATGGATAAACTGTCGCATAATGACATCCGGTATAGGAAATACACCATTGAAGATATTGAAGTTGCAACTGATTACTTCTCAAATTCACTGAAGATTGGTGAAGGTGGATATGGGCCTGTTTATAAAGGCTCACTTGATCATACACCTGTTGCCATTAAGGTTTTGAGACCAGACGTGTCACAGGGGCTGAAACAATTTAAACAAGAGGTTGAGGTACTGAGCTGCATGAGACATCCAAATATGGTTCTCCTTGTAGGTGCCTGCCCTGAGTATGGATGCCTTGTGTATGAATACATGGAAAATGGCAGTTTAGATGACAGGCTTTTCAGAAGAAACAACACTCTCCCACTCCCATGGGCAACCCGTTTCAAGATAGCATCTGAGATCGCCTCTGCCCTTCTTTTCCTTCACCAAACAAAACCAGCTCCCCTAGTTCATCGTGATCTCAAGCCTGCCAACATTCTCCTGGGCAGAAATTATGTGAGCAAGATCAGTGATGTTGGCTTAGCACGGCTGGTTCCAGCTTCTGTGGCTGATAGTGTGACTCAATATCATATGACAGCAGCTGCTGGGACATTTTGTTACATTGATCCTGAGTATCAACAAACAGGAATGCTAGGTGTGAAATCAGACGTGTATTCGTTAGGTGTATTGTTACTACAAATTATTACAGCAAAGCCTCCAATGGGACTGACCCACCAAGTTGCTAGGTCCATTGAGAGAGGAACATTTGCAGAGATGCTTGATCCAACAGTGGAAGATTGGCCAGTTGAGGAGGCTTTATCATTTGCAAAAATGGCTTTGAATTGTTGTGAGCTAAGGAAGAAGGACCGGCCTGATCTTGGTTCAGTGATGTCAGTCAGATCACTTTTAGAAGAGGGTAGCAACTGTTCAGTTCAAAACTGGAAAAGGGAACATTCAGCAAAGAAACTTTTGATGTTCTGCAAATCTTATACACTCGTCTGA 2151 45.33 MASQQNPPLEDSLFTTIIAIDKDKSSQYAVKWAVDNLLSKTSITTLIHVRSVNSQTQDVNMAPKGGRPPTETEMQQLFLPFRGFCARKGIEAKEVVLHDLDIASALVDYISNNSIGNIVVGASNRNRWHRKFRNPDVPTCLAKSAPESCAVYVISKGKIQSVRSAIRFQTPTSSVSSGVTQFQTPKGMGSWRSVEPDNGFFDRSTDSVQTTPRDKIMSSSKLFSPPQSRVNLHHRLRISENSSHQGSVSGSSNYSGPSSLRSSNSSSENLEFSGSSGSSLSSQTQNEMDAEMNRLKLELKQSMDAYNSASKEAMTATQRHRARDIHQRKTEEARRFPEARIGEETALAIVELEKQKSRKAMQAAQMAQRLAELEAHKRKNTELKAKREAEASGRAMDKLSHNDIRYRKYTIEDIEVATDYFSNSLKIGEGGYGPVYKGSLDHTPVAIKVLRPDVSQGLKQFKQEVEVLSCMRHPNMVLLVGACPEYGCLVYEYMENGSLDDRLFRRNNTLPLPWATRFKIASEIASALLFLHQTKPAPLVHRDLKPANILLGRNYVSKISDVGLARLVPASVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDVYSLGVLLLQIITAKPPMGLTHQVARSIERGTFAEMLDPTVEDWPVEEALSFAKMALNCCELRKKDRPDLGSVMSVRSLLEEGSNCSVQNWKREHSAKKLLMFCKSYTLV* 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1624105 1630917 - Vvi9g141 Vvi9g141 791852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g141 716 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 15 681 - -
Vvi9g141 716 Pfam Protein kinase domain 424 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g141 716 MobiDBLite consensus disorder prediction 316 334 - -
Vvi9g141 716 Coils Coil 285 312 - -
Vvi9g141 716 MobiDBLite consensus disorder prediction 175 228 - -
Vvi9g141 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Vvi9g141 716 ProSiteProfiles Protein kinase domain profile. 421 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g141 716 Gene3D Transferase(Phosphotransferase) domain 1 494 706 - -
Vvi9g141 716 MobiDBLite consensus disorder prediction 200 227 - -
Vvi9g141 716 MobiDBLite consensus disorder prediction 241 288 - -
Vvi9g141 716 CDD STK_N 15 157 - -
Vvi9g141 716 PANTHER OS02G0152300 PROTEIN 15 681 - -
Vvi9g141 716 MobiDBLite consensus disorder prediction 240 288 - -
Vvi9g141 716 Pfam Universal stress protein family 17 130 IPR006016 -
Vvi9g141 716 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 143 - -
Vvi9g141 716 Gene3D HUPs 15 154 IPR014729 -
Vvi9g141 716 SMART serkin_6 421 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g141 716 MobiDBLite consensus disorder prediction 310 334 - -
Vvi9g141 716 Coils Coil 366 386 - -
Vvi9g141 716 SUPERFAMILY Protein kinase-like (PK-like) 403 681 IPR011009 -
Vvi9g141 716 Gene3D Phosphorylase Kinase; domain 1 398 493 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi4g112 Vvi9g141 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76839 PF00069 Pkinase 3.20E-39 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g141 - - vvi:100254842 1209.51