Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi9g148 | ATGTCCGATGGTCGGGATTCGGAGGCCGACAGCTGCCCCCATGTGCGGAGGCTATCATCATTTCTTCCAATCACAATATTCCTTTTTATTTATTTATTACTAATATTTTTATTTTTAAATATATATATATATATATTTTATTGTTGTGTTTTAAAATATTTAACAAGCCAACAAAGATGGCGGGGATATCCCCTCCATACTCTTTGTCTTTTGAAGATCAGGATCGATTTGTTGGAATCCATGGCTGCACCGGTTAATATAGTTGTAGGTTCTCATGTATGGGTTGAAGATCCAGTGGAGGCATGGATTGATGGTGAAGTTTCTAGGATCAATGGTCTTGAGGTTCATGTTCATACCACAAAAGGAAAAACGGTTGTTGCGAATATTTCTAAGGTGTTTCCAAAGGATACTGAAGCTCCACCTGGAGGTGTAGATGACATGACAAAGCTTTCATATTTGCATGAACCTGGGGTTCTGCAAAACTTGGCCGCTAGATATGAACTTAATGAGATTTATACGTATACTGGAAACATCTTAATTGCAATAAATCCTTTTCAAAGATTGCCTCATCTGTATGACACCCACATGATGGAACAATATAAGGGAGCAGGTTTTGGGGAGCTCAGTCCTCATGTGTTTGCTGTTGCAGATGTTGCATACAGGGCAATGATTAATGAAGGAAAGAGCAACTCGATTTTGGTCAGTGGAGAAAGTGGTGCTGGTAAAACTGAAACAACAAAGATGCTCATGAGATATCTAGCCCACTTGGGAGGGAGATCTGGTGTAGAGGGAAGAACAGTTGAACAGCAGGTCTTGGAGTCCAATCCAGTTCTGGAAGCGTTTGGCAATGCCAAAACTGTTAGAAACAACAACTCGAGTCGTTTTGGTAAATTTGTTGAAATCCAATTTGACAAGAGTGGAAGGATATCTGGGGCAGCTGTCAGAACTTATCTTCTTGAAAGGTCTCGAGTATGCCAGATTTCAACTCCTGAGAGGAACTACCATTGCTTTTATCTTCTTTGTGCAGCACCACCTGAGGAAATTGAGAGATATAAGTTGGGGAATCCAAGAACCTTTCATTATCTAAATCAGTCAAATTGTTATGAACTGGATGGTGTAAATGATGGTCATGAATATCTGGCCACCAGAAGGGCTATGGATATAGTTGGAATTAGTGAACAAGAACAGGAGGCAATTTTCAGGGTTGTCGCTGCAATTCTTCATCTTGGCAATATTAATTTTGCAAAAGGAAAGGAGATAGATTCCTCAGTCATCAAGGATGAACAGTCGAGATTCCATCTTAACATGACGGCTGAACTTCTCAAGTGTGATGCCCAGAGCTTGGAAGATGCACTAATTAAACGTGTAATGGTGACACCAGAAGAAATTATTACAAGAACTCTTGATCCTGTTAATGCCATTGGTAGCAGGGACGCATTAGCTAAAACTATATATTCTCGCTTGTTTGATTGGCTTGTGGATAAAATTAACAACTCAATTGGGCAGGACCCAAACTCGAAGTCAATAATTGGAGTTCTTGATATCTATGGTTTTGAAAGTTTTAAGTGTAATAGTTTTGAGCAGTTCTGCATCAACTATACAAATGAGAAACTACAACAGCATTTCAATCAGCATGTCTTCAAAATGGAGCAAGAAGAGTATACAAAAGAAGAGATAAACTGGAGCTATATTGAGTTTGTTGATAATCAAGATGTTTTGGATCTGATTGAGAAGAAACCTGGAGGAATTATTTCACTTCTAGATGAAGCCTGCATGTTTCCTAAGTCTACACATGAGACGTTTGCACAGAAGTTGTACCAGACTTTTAAAAATAATAAACGTTTTATCAAACCAAAGCTTTCACGTACTGATTTTACTATTAGCCATTATGCAGGGGAGGTAAATTACCAAGCCAATCTGTTTCTGGACAAAAACAAAGATTATGTGGTGGCAGAACATCAAGCTTTGCTTACTGCATCAAATTGCCCCTTTGTGGTCAGTTTATTTCCTGCACAATCAGAGGAAACATCAAAGTCATCCAAATTTTCTTCCATTGGATCACGTTTTAAGCTACAACTGCAATCTTTGATGGAGACTTTGAGTGCTACTGAACCTCACTACATCAGATGCGTGAAGCCAAATAATGTCTTGAAGCCTGCCATTTTTGAGAATGCCAATATTATCCAACAATTACGCTGTGGTGGTGTTCTCGAGGCAATCAGGATCAGCTGTGCTGGATATCCTACCAGGCGGACATTCTATGAGTTTCTTCACCGTTTTGGTGTTCTTGCTCCAGAAGTTCTTGAGGGAAACTATGATGACAAGACTGCATGCATAATGATTCTTGATAAAAAGGGTTTGAAAGGATACCAGGTGGGCAAGACAAAGGTTTTTCTGAGAGCAGGTCAGATGGCCGAGTTAGATGCCAGAAGAGCTGAGGTTCTTGGGAATGCAGCTAGAACAATTCAACGACAAATTCGTACTTACATTGCACGCAAGGAGTTCATCTCATTACGCAAAGCTGCTATTCAGATGCAATCCTATTGGCGAGGTAGAATGGCCTGCAAACTGTATGAGCAATTGAGGCGAGAAGCTGCAGCTCTGAAGATCCAGAAGAACTTTAGACGATATATCGCCAGGAAATCATACTTAACAGTACGATCATCTGCAATCACATTGCAAACAGGCTTGAGGGCAATGACTGCACGCAATGAATTCAGATTCCGGAAGCAAACTAAAGCTGCCATCATCATCCAGGCACATTGGCGTTGCCACCAAGCTTACTCTTATTATAAGAGTCTTCAGAAGGCAATAATTGTAACTCAGTGTAGTTGGAGATGCAGAGTTGCCAGAAGAGAGCTTAGAAAGCTCAAAATGGCTGCAAGAGAAACAGGGGCCCTTAAAGAAGCAAAGGACAAGCTAGAAAAGCGGGTGGAGGAACTTACATGGAGATTGCAGTTGGAGAAGCGATTAAGGGTTGATCTTGAGGAGGCAAAAGCCCAGGAAACTGCTAAACTGCAAGAAACGTTGCACGCAATGCAATTGCAAATAGAAGAAGCTAATGTCATGGTTATCAGAGAACGAGAGGCAGCTCGGAAAGCAATTGAAGAAGCACCTCCTGTCATTAAGGAGACCCCAGTTATAGTCCAAGATACAGAGAAGGTGGACTCGTTGACAGCTGAAGTTGAAAGGCTGAAGGCTTCTTTACTATCACAAACACAAGCAGCAGAAGAGGCCAAGCAAGCTTGTGCTGCTGCTCAGGCCCAAAATGAGGAACTAACCACAAAGCTTGGTGATGCAGAGAAGAAAGTGGATCAACTCCAAGATTCAGTGCAGAGGCTTGAAGAGAAGCTTTCTAATTTAGAATCAGAGAATCAAGTACTTCGTCAACAGGCACTGGCCATATCACCAACTGCTAAAGCTCTATCTGCACGACCAAAAACACCGATTCTTCAGAGAACTCCTGAGAATGGAAATGTTCTAAATGGAGAAGCAAAGAAACAATTGGATTCAAGTCTTGCCCTTTCTTCTCCACGGGAACCTGAATCTGAGGAAAAGCCCCAGAAATCTCTCAATGAGAAGCAGCAGGAAAACCAAGACCTGCTAATCAAGTGTATTTCACAAGATCTAGGATTCTCTGGGGGCAGGCCTATTGCTGCTTGCTTGATTTACAAATCCCTTCTCCAATGGAGGTCATTTGAGGTTGAAAGAACCAGTGTATTTGATCGTATTATTCAGACAATAGGTGCAGCAATAGAGGTCCAGGATAACAACGATGTTTTGTCCTATTGGTTATGTAATTCGTCTACACTGCTGTTGCTTCTTCAACGCACACTCAAAGCAAGTGGAGCAGCTAGCTTAACTCCACAAAGGCGGAGATCAACATCAGCTTCTTTATTTGGGAGGATGTCTCAAGGGCTTCGTGCATCTCCACAAAGTGCTGGGTTCTCATTTCTTAATGGTCGGGTGCTTGGTGGACTGGATGACTTGAGACAAGTTGAAGCCAAATATCCAGCTTTGCTTTTCAAACAGCAACTCACAGCCTTCCTTGAGAAGATATATGGAATGATAAGAGACAATTTAAAGAAAGAGATTTCCCCATTGCTTGGATTGTGTATTCAGGCACCTAGAACATCCCGGGCAAGTTTAGTGAAGGGACGTTCTCAAGCTAATGCTGTTGCACAACAAGCATTGATTGCTCATTGGCAAAGCATTGTGAAAAGCCTGAATTATTACTTGAAGATAATGAAAGCAAACCATGTTCCACCATTCCTAGTCCGCAAGGTGTTCACTCAGATATTTTCGTTCATCAATGTTCAGTTATTCAACAGTCTCCTTTTGAGGCGTGAATGTTGCTCATTCAGCAATGGGGAGTTTGTTAAGACAGGATTGGCCGAGTTAGAAAACTGGTGCCATGAAGCAACCGAAGAGTATGCTGGCTCAGCTTGGGATGAACTGAGGCATATCAGACAAGCAGTTGGATTCCTGGTTATACATCAAAAGCCTAAAAAAACTTTGAAAGAAATAACAAATGATCTTTGCCCGGTACTTAGCATACAACAATTATACAGGATCAGTACCATGTACTGGGATGACAAATATGGTACACACAGCGTATCATCAGATGTTATTTCGAGCATGAGAGTAATGATGACTGAAGATTCGAACAATGCTGTCAGTAGTTCGTTCTTATTGGATGATGACTCAAGTATTCCATTCACTGTGGATGATATTTCCAAGACAATGCAACAAATAGAAGTTTCTGATATTGATCCTCCACCACTGATTCGTGAAAACTCAGGCTTCTCATTCTTATTACCAAGGGCCGAATGA | 4833 | 41.26 | MSDGRDSEADSCPHVRRLSSFLPITIFLFIYLLLIFLFLNIYIYIFYCCVLKYLTSQQRWRGYPLHTLCLLKIRIDLLESMAAPVNIVVGSHVWVEDPVEAWIDGEVSRINGLEVHVHTTKGKTVVANISKVFPKDTEAPPGGVDDMTKLSYLHEPGVLQNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISTPERNYHCFYLLCAAPPEEIERYKLGNPRTFHYLNQSNCYELDGVNDGHEYLATRRAMDIVGISEQEQEAIFRVVAAILHLGNINFAKGKEIDSSVIKDEQSRFHLNMTAELLKCDAQSLEDALIKRVMVTPEEIITRTLDPVNAIGSRDALAKTIYSRLFDWLVDKINNSIGQDPNSKSIIGVLDIYGFESFKCNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTDFTISHYAGEVNYQANLFLDKNKDYVVAEHQALLTASNCPFVVSLFPAQSEETSKSSKFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPEVLEGNYDDKTACIMILDKKGLKGYQVGKTKVFLRAGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFISLRKAAIQMQSYWRGRMACKLYEQLRREAAALKIQKNFRRYIARKSYLTVRSSAITLQTGLRAMTARNEFRFRKQTKAAIIIQAHWRCHQAYSYYKSLQKAIIVTQCSWRCRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRVDLEEAKAQETAKLQETLHAMQLQIEEANVMVIREREAARKAIEEAPPVIKETPVIVQDTEKVDSLTAEVERLKASLLSQTQAAEEAKQACAAAQAQNEELTTKLGDAEKKVDQLQDSVQRLEEKLSNLESENQVLRQQALAISPTAKALSARPKTPILQRTPENGNVLNGEAKKQLDSSLALSSPREPESEEKPQKSLNEKQQENQDLLIKCISQDLGFSGGRPIAACLIYKSLLQWRSFEVERTSVFDRIIQTIGAAIEVQDNNDVLSYWLCNSSTLLLLLQRTLKASGAASLTPQRRRSTSASLFGRMSQGLRASPQSAGFSFLNGRVLGGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKTGLAELENWCHEATEEYAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISKTMQQIEVSDIDPPPLIRENSGFSFLLPRAE* | 1611 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1670134 | 1692366 | + | Vvi9g148 | Vvi9g148 | 791859 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi9g148 | 1610 | Gene3D | - | 815 | 865 | - | - | |
| Vvi9g148 | 1610 | Gene3D | - | 866 | 912 | - | - | |
| Vvi9g148 | 1610 | Gene3D | - | 913 | 962 | - | - | |
| Vvi9g148 | 1610 | ProSiteProfiles | Myosin motor domain profile. | 142 | 812 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | MobiDBLite | consensus disorder prediction | 1150 | 1178 | - | - | |
| Vvi9g148 | 1610 | MobiDBLite | consensus disorder prediction | 1179 | 1193 | - | - | |
| Vvi9g148 | 1610 | Gene3D | - | 1047 | 1148 | - | - | |
| Vvi9g148 | 1610 | MobiDBLite | consensus disorder prediction | 1144 | 1194 | - | - | |
| Vvi9g148 | 1610 | Pfam | IQ calmodulin-binding motif | 936 | 955 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | Pfam | IQ calmodulin-binding motif | 839 | 854 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | Pfam | IQ calmodulin-binding motif | 912 | 932 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | Pfam | IQ calmodulin-binding motif | 817 | 835 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | Pfam | IQ calmodulin-binding motif | 865 | 883 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | ProSiteProfiles | IQ motif profile. | 838 | 867 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | ProSiteProfiles | IQ motif profile. | 817 | 844 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | PANTHER | MYOSIN-5 | 86 | 1607 | - | - | |
| Vvi9g148 | 1610 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 114 | 865 | IPR027417 | - | |
| Vvi9g148 | 1610 | Pfam | DIL domain | 1429 | 1532 | IPR002710 | - | |
| Vvi9g148 | 1610 | CDD | MYSc_Myo11 | 156 | 800 | IPR036018 | - | |
| Vvi9g148 | 1610 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 392 | 681 | - | - | |
| Vvi9g148 | 1610 | Pfam | Myosin N-terminal SH3-like domain | 90 | 131 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | Gene3D | - | 519 | 703 | - | - | |
| Vvi9g148 | 1610 | Gene3D | - | 332 | 390 | - | - | |
| Vvi9g148 | 1610 | Gene3D | Kinesin motor domain | 145 | 742 | IPR036961 | - | |
| Vvi9g148 | 1610 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 88 | 137 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 865 | 963 | IPR027417 | - | |
| Vvi9g148 | 1610 | ProSiteProfiles | IQ motif profile. | 911 | 938 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | ProSiteProfiles | IQ motif profile. | 934 | 963 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | PANTHER | MYOSIN | 86 | 1607 | - | - | |
| Vvi9g148 | 1610 | PRINTS | Myosin heavy chain signature | 172 | 191 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | PRINTS | Myosin heavy chain signature | 229 | 254 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | PRINTS | Myosin heavy chain signature | 276 | 303 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | PRINTS | Myosin heavy chain signature | 509 | 537 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | PRINTS | Myosin heavy chain signature | 562 | 590 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | SMART | MYSc_2a | 136 | 813 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | Pfam | Myosin head (motor domain) | 144 | 800 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Vvi9g148 | 1610 | Coils | Coil | 1048 | 1131 | - | - | |
| Vvi9g148 | 1610 | Coils | Coil | 957 | 991 | - | - | |
| Vvi9g148 | 1610 | SMART | iq_5 | 933 | 955 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | SMART | iq_5 | 862 | 884 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | SMART | iq_5 | 910 | 932 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | SMART | iq_5 | 885 | 907 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | SMART | iq_5 | 837 | 859 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | SMART | iq_5 | 814 | 836 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | ProSiteProfiles | IQ motif profile. | 887 | 915 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | ProSiteProfiles | IQ motif profile. | 863 | 892 | IPR000048 | GO:0005515 | |
| Vvi9g148 | 1610 | ProSiteProfiles | Dilute domain profile. | 1242 | 1553 | IPR002710 | - | |
| Vvi9g148 | 1610 | SMART | DIL_2 | 1428 | 1535 | IPR002710 | - | |
| Vvi9g148 | 1610 | Gene3D | - | 747 | 813 | - | - | |
| Vvi9g148 | 1610 | CDD | MyosinXI_CBD | 1193 | 1576 | IPR037975 | GO:0007015 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi9g148 | K10357 | - | vvi:100266890 | 2932.9 |