Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g148 ATGTCCGATGGTCGGGATTCGGAGGCCGACAGCTGCCCCCATGTGCGGAGGCTATCATCATTTCTTCCAATCACAATATTCCTTTTTATTTATTTATTACTAATATTTTTATTTTTAAATATATATATATATATATTTTATTGTTGTGTTTTAAAATATTTAACAAGCCAACAAAGATGGCGGGGATATCCCCTCCATACTCTTTGTCTTTTGAAGATCAGGATCGATTTGTTGGAATCCATGGCTGCACCGGTTAATATAGTTGTAGGTTCTCATGTATGGGTTGAAGATCCAGTGGAGGCATGGATTGATGGTGAAGTTTCTAGGATCAATGGTCTTGAGGTTCATGTTCATACCACAAAAGGAAAAACGGTTGTTGCGAATATTTCTAAGGTGTTTCCAAAGGATACTGAAGCTCCACCTGGAGGTGTAGATGACATGACAAAGCTTTCATATTTGCATGAACCTGGGGTTCTGCAAAACTTGGCCGCTAGATATGAACTTAATGAGATTTATACGTATACTGGAAACATCTTAATTGCAATAAATCCTTTTCAAAGATTGCCTCATCTGTATGACACCCACATGATGGAACAATATAAGGGAGCAGGTTTTGGGGAGCTCAGTCCTCATGTGTTTGCTGTTGCAGATGTTGCATACAGGGCAATGATTAATGAAGGAAAGAGCAACTCGATTTTGGTCAGTGGAGAAAGTGGTGCTGGTAAAACTGAAACAACAAAGATGCTCATGAGATATCTAGCCCACTTGGGAGGGAGATCTGGTGTAGAGGGAAGAACAGTTGAACAGCAGGTCTTGGAGTCCAATCCAGTTCTGGAAGCGTTTGGCAATGCCAAAACTGTTAGAAACAACAACTCGAGTCGTTTTGGTAAATTTGTTGAAATCCAATTTGACAAGAGTGGAAGGATATCTGGGGCAGCTGTCAGAACTTATCTTCTTGAAAGGTCTCGAGTATGCCAGATTTCAACTCCTGAGAGGAACTACCATTGCTTTTATCTTCTTTGTGCAGCACCACCTGAGGAAATTGAGAGATATAAGTTGGGGAATCCAAGAACCTTTCATTATCTAAATCAGTCAAATTGTTATGAACTGGATGGTGTAAATGATGGTCATGAATATCTGGCCACCAGAAGGGCTATGGATATAGTTGGAATTAGTGAACAAGAACAGGAGGCAATTTTCAGGGTTGTCGCTGCAATTCTTCATCTTGGCAATATTAATTTTGCAAAAGGAAAGGAGATAGATTCCTCAGTCATCAAGGATGAACAGTCGAGATTCCATCTTAACATGACGGCTGAACTTCTCAAGTGTGATGCCCAGAGCTTGGAAGATGCACTAATTAAACGTGTAATGGTGACACCAGAAGAAATTATTACAAGAACTCTTGATCCTGTTAATGCCATTGGTAGCAGGGACGCATTAGCTAAAACTATATATTCTCGCTTGTTTGATTGGCTTGTGGATAAAATTAACAACTCAATTGGGCAGGACCCAAACTCGAAGTCAATAATTGGAGTTCTTGATATCTATGGTTTTGAAAGTTTTAAGTGTAATAGTTTTGAGCAGTTCTGCATCAACTATACAAATGAGAAACTACAACAGCATTTCAATCAGCATGTCTTCAAAATGGAGCAAGAAGAGTATACAAAAGAAGAGATAAACTGGAGCTATATTGAGTTTGTTGATAATCAAGATGTTTTGGATCTGATTGAGAAGAAACCTGGAGGAATTATTTCACTTCTAGATGAAGCCTGCATGTTTCCTAAGTCTACACATGAGACGTTTGCACAGAAGTTGTACCAGACTTTTAAAAATAATAAACGTTTTATCAAACCAAAGCTTTCACGTACTGATTTTACTATTAGCCATTATGCAGGGGAGGTAAATTACCAAGCCAATCTGTTTCTGGACAAAAACAAAGATTATGTGGTGGCAGAACATCAAGCTTTGCTTACTGCATCAAATTGCCCCTTTGTGGTCAGTTTATTTCCTGCACAATCAGAGGAAACATCAAAGTCATCCAAATTTTCTTCCATTGGATCACGTTTTAAGCTACAACTGCAATCTTTGATGGAGACTTTGAGTGCTACTGAACCTCACTACATCAGATGCGTGAAGCCAAATAATGTCTTGAAGCCTGCCATTTTTGAGAATGCCAATATTATCCAACAATTACGCTGTGGTGGTGTTCTCGAGGCAATCAGGATCAGCTGTGCTGGATATCCTACCAGGCGGACATTCTATGAGTTTCTTCACCGTTTTGGTGTTCTTGCTCCAGAAGTTCTTGAGGGAAACTATGATGACAAGACTGCATGCATAATGATTCTTGATAAAAAGGGTTTGAAAGGATACCAGGTGGGCAAGACAAAGGTTTTTCTGAGAGCAGGTCAGATGGCCGAGTTAGATGCCAGAAGAGCTGAGGTTCTTGGGAATGCAGCTAGAACAATTCAACGACAAATTCGTACTTACATTGCACGCAAGGAGTTCATCTCATTACGCAAAGCTGCTATTCAGATGCAATCCTATTGGCGAGGTAGAATGGCCTGCAAACTGTATGAGCAATTGAGGCGAGAAGCTGCAGCTCTGAAGATCCAGAAGAACTTTAGACGATATATCGCCAGGAAATCATACTTAACAGTACGATCATCTGCAATCACATTGCAAACAGGCTTGAGGGCAATGACTGCACGCAATGAATTCAGATTCCGGAAGCAAACTAAAGCTGCCATCATCATCCAGGCACATTGGCGTTGCCACCAAGCTTACTCTTATTATAAGAGTCTTCAGAAGGCAATAATTGTAACTCAGTGTAGTTGGAGATGCAGAGTTGCCAGAAGAGAGCTTAGAAAGCTCAAAATGGCTGCAAGAGAAACAGGGGCCCTTAAAGAAGCAAAGGACAAGCTAGAAAAGCGGGTGGAGGAACTTACATGGAGATTGCAGTTGGAGAAGCGATTAAGGGTTGATCTTGAGGAGGCAAAAGCCCAGGAAACTGCTAAACTGCAAGAAACGTTGCACGCAATGCAATTGCAAATAGAAGAAGCTAATGTCATGGTTATCAGAGAACGAGAGGCAGCTCGGAAAGCAATTGAAGAAGCACCTCCTGTCATTAAGGAGACCCCAGTTATAGTCCAAGATACAGAGAAGGTGGACTCGTTGACAGCTGAAGTTGAAAGGCTGAAGGCTTCTTTACTATCACAAACACAAGCAGCAGAAGAGGCCAAGCAAGCTTGTGCTGCTGCTCAGGCCCAAAATGAGGAACTAACCACAAAGCTTGGTGATGCAGAGAAGAAAGTGGATCAACTCCAAGATTCAGTGCAGAGGCTTGAAGAGAAGCTTTCTAATTTAGAATCAGAGAATCAAGTACTTCGTCAACAGGCACTGGCCATATCACCAACTGCTAAAGCTCTATCTGCACGACCAAAAACACCGATTCTTCAGAGAACTCCTGAGAATGGAAATGTTCTAAATGGAGAAGCAAAGAAACAATTGGATTCAAGTCTTGCCCTTTCTTCTCCACGGGAACCTGAATCTGAGGAAAAGCCCCAGAAATCTCTCAATGAGAAGCAGCAGGAAAACCAAGACCTGCTAATCAAGTGTATTTCACAAGATCTAGGATTCTCTGGGGGCAGGCCTATTGCTGCTTGCTTGATTTACAAATCCCTTCTCCAATGGAGGTCATTTGAGGTTGAAAGAACCAGTGTATTTGATCGTATTATTCAGACAATAGGTGCAGCAATAGAGGTCCAGGATAACAACGATGTTTTGTCCTATTGGTTATGTAATTCGTCTACACTGCTGTTGCTTCTTCAACGCACACTCAAAGCAAGTGGAGCAGCTAGCTTAACTCCACAAAGGCGGAGATCAACATCAGCTTCTTTATTTGGGAGGATGTCTCAAGGGCTTCGTGCATCTCCACAAAGTGCTGGGTTCTCATTTCTTAATGGTCGGGTGCTTGGTGGACTGGATGACTTGAGACAAGTTGAAGCCAAATATCCAGCTTTGCTTTTCAAACAGCAACTCACAGCCTTCCTTGAGAAGATATATGGAATGATAAGAGACAATTTAAAGAAAGAGATTTCCCCATTGCTTGGATTGTGTATTCAGGCACCTAGAACATCCCGGGCAAGTTTAGTGAAGGGACGTTCTCAAGCTAATGCTGTTGCACAACAAGCATTGATTGCTCATTGGCAAAGCATTGTGAAAAGCCTGAATTATTACTTGAAGATAATGAAAGCAAACCATGTTCCACCATTCCTAGTCCGCAAGGTGTTCACTCAGATATTTTCGTTCATCAATGTTCAGTTATTCAACAGTCTCCTTTTGAGGCGTGAATGTTGCTCATTCAGCAATGGGGAGTTTGTTAAGACAGGATTGGCCGAGTTAGAAAACTGGTGCCATGAAGCAACCGAAGAGTATGCTGGCTCAGCTTGGGATGAACTGAGGCATATCAGACAAGCAGTTGGATTCCTGGTTATACATCAAAAGCCTAAAAAAACTTTGAAAGAAATAACAAATGATCTTTGCCCGGTACTTAGCATACAACAATTATACAGGATCAGTACCATGTACTGGGATGACAAATATGGTACACACAGCGTATCATCAGATGTTATTTCGAGCATGAGAGTAATGATGACTGAAGATTCGAACAATGCTGTCAGTAGTTCGTTCTTATTGGATGATGACTCAAGTATTCCATTCACTGTGGATGATATTTCCAAGACAATGCAACAAATAGAAGTTTCTGATATTGATCCTCCACCACTGATTCGTGAAAACTCAGGCTTCTCATTCTTATTACCAAGGGCCGAATGA 4833 41.26 MSDGRDSEADSCPHVRRLSSFLPITIFLFIYLLLIFLFLNIYIYIFYCCVLKYLTSQQRWRGYPLHTLCLLKIRIDLLESMAAPVNIVVGSHVWVEDPVEAWIDGEVSRINGLEVHVHTTKGKTVVANISKVFPKDTEAPPGGVDDMTKLSYLHEPGVLQNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAHLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSRVCQISTPERNYHCFYLLCAAPPEEIERYKLGNPRTFHYLNQSNCYELDGVNDGHEYLATRRAMDIVGISEQEQEAIFRVVAAILHLGNINFAKGKEIDSSVIKDEQSRFHLNMTAELLKCDAQSLEDALIKRVMVTPEEIITRTLDPVNAIGSRDALAKTIYSRLFDWLVDKINNSIGQDPNSKSIIGVLDIYGFESFKCNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTDFTISHYAGEVNYQANLFLDKNKDYVVAEHQALLTASNCPFVVSLFPAQSEETSKSSKFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPEVLEGNYDDKTACIMILDKKGLKGYQVGKTKVFLRAGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFISLRKAAIQMQSYWRGRMACKLYEQLRREAAALKIQKNFRRYIARKSYLTVRSSAITLQTGLRAMTARNEFRFRKQTKAAIIIQAHWRCHQAYSYYKSLQKAIIVTQCSWRCRVARRELRKLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRVDLEEAKAQETAKLQETLHAMQLQIEEANVMVIREREAARKAIEEAPPVIKETPVIVQDTEKVDSLTAEVERLKASLLSQTQAAEEAKQACAAAQAQNEELTTKLGDAEKKVDQLQDSVQRLEEKLSNLESENQVLRQQALAISPTAKALSARPKTPILQRTPENGNVLNGEAKKQLDSSLALSSPREPESEEKPQKSLNEKQQENQDLLIKCISQDLGFSGGRPIAACLIYKSLLQWRSFEVERTSVFDRIIQTIGAAIEVQDNNDVLSYWLCNSSTLLLLLQRTLKASGAASLTPQRRRSTSASLFGRMSQGLRASPQSAGFSFLNGRVLGGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKTGLAELENWCHEATEEYAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISKTMQQIEVSDIDPPPLIRENSGFSFLLPRAE* 1611
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 1670134 1692366 + Vvi9g148 Vvi9g148 791859
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g148 1610 Gene3D - 815 865 - -
Vvi9g148 1610 Gene3D - 866 912 - -
Vvi9g148 1610 Gene3D - 913 962 - -
Vvi9g148 1610 ProSiteProfiles Myosin motor domain profile. 142 812 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 MobiDBLite consensus disorder prediction 1150 1178 - -
Vvi9g148 1610 MobiDBLite consensus disorder prediction 1179 1193 - -
Vvi9g148 1610 Gene3D - 1047 1148 - -
Vvi9g148 1610 MobiDBLite consensus disorder prediction 1144 1194 - -
Vvi9g148 1610 Pfam IQ calmodulin-binding motif 936 955 IPR000048 GO:0005515
Vvi9g148 1610 Pfam IQ calmodulin-binding motif 839 854 IPR000048 GO:0005515
Vvi9g148 1610 Pfam IQ calmodulin-binding motif 912 932 IPR000048 GO:0005515
Vvi9g148 1610 Pfam IQ calmodulin-binding motif 817 835 IPR000048 GO:0005515
Vvi9g148 1610 Pfam IQ calmodulin-binding motif 865 883 IPR000048 GO:0005515
Vvi9g148 1610 ProSiteProfiles IQ motif profile. 838 867 IPR000048 GO:0005515
Vvi9g148 1610 ProSiteProfiles IQ motif profile. 817 844 IPR000048 GO:0005515
Vvi9g148 1610 PANTHER MYOSIN-5 86 1607 - -
Vvi9g148 1610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 865 IPR027417 -
Vvi9g148 1610 Pfam DIL domain 1429 1532 IPR002710 -
Vvi9g148 1610 CDD MYSc_Myo11 156 800 IPR036018 -
Vvi9g148 1610 Gene3D Myosin VI head, motor domain, U50 subdomain 392 681 - -
Vvi9g148 1610 Pfam Myosin N-terminal SH3-like domain 90 131 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 Gene3D - 519 703 - -
Vvi9g148 1610 Gene3D - 332 390 - -
Vvi9g148 1610 Gene3D Kinesin motor domain 145 742 IPR036961 -
Vvi9g148 1610 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 88 137 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 963 IPR027417 -
Vvi9g148 1610 ProSiteProfiles IQ motif profile. 911 938 IPR000048 GO:0005515
Vvi9g148 1610 ProSiteProfiles IQ motif profile. 934 963 IPR000048 GO:0005515
Vvi9g148 1610 PANTHER MYOSIN 86 1607 - -
Vvi9g148 1610 PRINTS Myosin heavy chain signature 172 191 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 PRINTS Myosin heavy chain signature 229 254 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 PRINTS Myosin heavy chain signature 276 303 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 PRINTS Myosin heavy chain signature 509 537 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 PRINTS Myosin heavy chain signature 562 590 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 SMART MYSc_2a 136 813 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 Pfam Myosin head (motor domain) 144 800 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi9g148 1610 Coils Coil 1048 1131 - -
Vvi9g148 1610 Coils Coil 957 991 - -
Vvi9g148 1610 SMART iq_5 933 955 IPR000048 GO:0005515
Vvi9g148 1610 SMART iq_5 862 884 IPR000048 GO:0005515
Vvi9g148 1610 SMART iq_5 910 932 IPR000048 GO:0005515
Vvi9g148 1610 SMART iq_5 885 907 IPR000048 GO:0005515
Vvi9g148 1610 SMART iq_5 837 859 IPR000048 GO:0005515
Vvi9g148 1610 SMART iq_5 814 836 IPR000048 GO:0005515
Vvi9g148 1610 ProSiteProfiles IQ motif profile. 887 915 IPR000048 GO:0005515
Vvi9g148 1610 ProSiteProfiles IQ motif profile. 863 892 IPR000048 GO:0005515
Vvi9g148 1610 ProSiteProfiles Dilute domain profile. 1242 1553 IPR002710 -
Vvi9g148 1610 SMART DIL_2 1428 1535 IPR002710 -
Vvi9g148 1610 Gene3D - 747 813 - -
Vvi9g148 1610 CDD MyosinXI_CBD 1193 1576 IPR037975 GO:0007015
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g148 K10357 - vvi:100266890 2932.9