Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g163 ATGCACAACTTGTGGATTGTGTTTTTGACAGCCATCTTCTTGTCCACCATAATTCTTCTCTACAGAAACAGATCTAGAATCAGATCATCACCAAGCTCATCACTTCCTCTAGGAACTCTTGGATGGCCTCTTATCGGCGAAACCCTAGAGTTCATCTCTTGTGCCTACTCAGACCGCCCTGAGAGCTTCATGGAGCGGCGGCGTCGCATGTATGGAAAGGTGTTCAAGTCTCACATATTTGGGAGCCCAACAATAGTTTCCATTGATGCAGAAGTGAGTAGATTTGTGTTGCAGAGTGATTCAAAGGCCTTTGTGCCATCTTACCCTAAATCTCTCACTGAGCTGATGGGGCAGTCCTCCATTTTGCTCATCAATGGAAGCTTGCAGAGGAGAGTCCATGGACTGATTGGAGCCTTCTTCAAATCCCCACATCTCAAAGCTCAAATCACTCAAGAAATGGAGAGTTATATTCAGAAATCAATGGGGTCTTGGAGAGATGATCACCCCATTTTCATCCAGGATGAAGCAAAAAATATTGCTTTTCAAGTCCTAGTGAAGGCACTGATCAGTTTGAATCCAGGTGAAGAAATGGAGTTTCTAAGAAAACAGTTCCAGGAATTCATCTCAGGCCTCATGTCCTTGCCTGTAAACATACCCGGAACAAGGCTTTACAGATCTTTACAGGCCAAGAAGAAAATGGTTCAATTAGTAGGAAAAATCATCCAAGAAAGGAGAAATATCAACCAACCCTCCAAGGTCCCCAAAGATGTTCTGGATGTTCTCCTCAATGACTCAAGCCAACTACTGACCGATACCCTCATATCCGATAATATGATCGATCTGATGATTCCTGGAGAGGATTCAGTACCAGTTCTCGTGACTCTCGCGATCAAATACCTCTCCGATTGCCCTGCAGCCCTCCAACAACTGACGGAGGAGAACATGAGACTGAAGAGACTAAAAGCCGAGCGGGGAGAGACGATGACTTGGAGCGATTACTTATCGCTACCATTCACGCAGACGGTGATCACAGAAACACTAAGGTTGGGAAACGTTATTATAGGGGTGATGAGGAAGGCCATGAAGGATGTGGAGATAAAGGGACATAGGATACCAAAAGGATGGTGCGTTTTCGCATATTTTCGGTCTGTCCATCTTGATGAAAGCCAGTATGACTGGCCTTATCAGTTCAACCCATGGAGGTGGCAAGACAAAAATATTAGCAGTTGTAGCTTCACTCCTTTTGGTGGTGGACAAAGGCTGTGTCCAGGGCTTGACTTGGCCAGGCTGGAGGCTTCAATCTTCCTCCACCACTTTGTTACTCAATTCAGGTGGGTGGCTGAGGATGATTCAATTGTCAACTTCCCCACAGTAAGAATGAAGAGAAGGATGCCTGTTTGGGTCAAAAGGAGAAGAGACTACTCTTGA 1428 45.38 MHNLWIVFLTAIFLSTIILLYRNRSRIRSSPSSSLPLGTLGWPLIGETLEFISCAYSDRPESFMERRRRMYGKVFKSHIFGSPTIVSIDAEVSRFVLQSDSKAFVPSYPKSLTELMGQSSILLINGSLQRRVHGLIGAFFKSPHLKAQITQEMESYIQKSMGSWRDDHPIFIQDEAKNIAFQVLVKALISLNPGEEMEFLRKQFQEFISGLMSLPVNIPGTRLYRSLQAKKKMVQLVGKIIQERRNINQPSKVPKDVLDVLLNDSSQLLTDTLISDNMIDLMIPGEDSVPVLVTLAIKYLSDCPAALQQLTEENMRLKRLKAERGETMTWSDYLSLPFTQTVITETLRLGNVIIGVMRKAMKDVEIKGHRIPKGWCVFAYFRSVHLDESQYDWPYQFNPWRWQDKNISSCSFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWVAEDDSIVNFPTVRMKRRMPVWVKRRRDYS* 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1886685 1891994 - Vvi9g163 Vvi9g163 791874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g163 475 PANTHER CYTOCHROME P450 26 21 466 - -
Vvi9g163 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Vvi9g163 475 SUPERFAMILY Cytochrome P450 32 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS P450 superfamily signature 141 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 21 466 - -
Vvi9g163 475 Gene3D Cytochrome P450 26 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi9g163 475 Pfam Cytochrome P450 36 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g163 K12638 - vvi:100259945 927.932