Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g175 ATGGGGATGCCATTGGTGCTTCTGGTGATGACACAATGCTTGGCATTCACTGCCTTGTCAGCTCATGGATCTGCAGATCCTGCAGTCTCTCCTACATCAAATTCTCTGAGCCATGGCAGGAAAAAACATGGAACGGTAGCAGCTGCGCCTCCAAACAAAGAGTTCCACATCTTACAATCCATGGAGCATTCTCCAACAGAAGCCCATCATCCCCACCACAGAGTGAGGCTGTCCAATATTGCTGTTCCACCCTCTAGTTTGCCTTTTAAACATCAGGCGAAGAAACATGTGCATGGTTCCGCATCTTCACCTACAACCTCATTTTATAGGCATCATCATGCAAGGAACAAGTTCCGAAACTCTGCTCCTGCACCATCTCATCTGCTTTCTCCTCACCCTTATAGCCAGCAAGGGCCTTCAGTCTCCTCATTCCACTCTCCTGTTCCTTCATCAACAAGCTGGGGTTCGCCTTCACCTGCACCATCACCAGCACCTCTATCAAGACAAATAAACATGCATTTTCATCCACCGGCAGTTGCTCCTTTGGGTTCCTCCCTGAAGAATATGAAGACTCCACCGCCACCACTGGTTTGGACATTACCACCTCCACCTCCTAATGAAGATTGTGCATCATTGACTTGCACAGAACCTTTAACATATACGCCTCCTGGATCACCCTGCGGTTGTGTGTGGCCAATTCAAGTTAAATTGCGCCTTAGTGTAGCACTATATACTTTCTTCCCCTTGGTCTCGGAGCTGGCTGATGAAATTGCTGCTGGTGTTTCACTAAATCATAGCCAGGTTCGCATTATGGGAGCAAATGCAGCCAACCAGCAGCTAGACAAAACTATCATCCTGATCGACTTGGTACCACTTGGAGAAAAATTCAATCATACCACTGCATTTTCAATCTACGAGAAGTTCTGGCTCAAAAAATTTTTTATAAAGACTTCCCTCTATGGTGGATATGAAGCATTATATGTTCGATATCCAGGTCTTCCACCTTCTCCGCCTTCAAGCATTAGTAATATTGATGACGGGTCATACTCAGGCCATGGCAACAATGGAAGGGTAATGAAACCCTTGGGGGTTGATGTGCCTCAGAAACAGAAACATGGGCTTGGAGGAAGTATGATCACTGTGATTGTTTTATCATCTGTGACGGGTTTTGTTATATGCATTGCAGTTGCTTGGGTTTTGGTATTGAAGTGCAGAGGTCATGTTCATCAAGCTGAAGATATTCCACATTCTTTGATTTCCTCCTTTGCAAAACCATCAGGGGCTGCTGGGTCTATGATGTTGGGAAGCAGGACCAGTTCTACATCAGTGTCCTTCAGTTCTGGGGTAGTGACATATACCGGATCTGCTAAGACCTTCAGTTTGAATGACATAGAGAGGGCCACAGATAACTTTGATGCTTCAAGAGTACTAGGAGAAGGTGGTTTTGGTCTTGTCTACAGGGGCATTCTAGATGATGGAGTGGAGGTAGCTGTTAAGGTTCTTAAGAGAGATGATCAGCAGGGTGGCCGAGAGTTCTTGGCAGAAGTTGAGATGCTTAGCCGTTTGCATCATAGGAACTTGGTTAAATTGATTGGCATCTGCACTGAGGAGCATACCCGCTGCCTCGTCTATGAACTTGTTCCAAATGGAAGTGTGGAATCACATTTACATGGAGTTGACAAGGAAGCTTCTCCTCTTGATTGGGGTGCACGAATGAAGATTGCCCTTGGTGCAGCTCGTGGTTTAGCATATCTGCATGAAGACTCTAGTCCTCGTGTTATACATCGGGATTTCAAGTCCAGCAACATCTTGTTAGAACATGACTTTACACCTAAAGTTTCTGACTTTGGTTTGGCTAGAACAGCACTTGACGAGGGGAACAAACATATCTCAACACGCGTGATGGGAACTTTTGGCTACTTAGCTCCAGAATATGCAATGACTGGCCATCTTCTCCCACCAGGTCAAGAAAATCTGGTTGCTTGGGCTCGTCCACTTCTCACAACCAAGGAAGGCCTAGAAACAATCATCGACCCAGCTCTGAAGTCAAGCTCCCCATTCGATAGTGCAGCCAAGGTAGCAGCAATTGCATCAATGTGCGTGCAACCAGAAGTGTCTCACCGTCCTTTCATGGGTGAAGTTGTTCAAGCCTTGAAGCTAGTGTGCAGTGAGTATGATGAGACAAAGGATCTAGCATCAAAAAGTTTCAGCCAAGAGAATTTGTCTATTGATGTAATTAGAAAGAGTAGTAGAGTCTTGGGTGAGCTTCTGGAAGTTTCACAGGTCCATCACCCTGGTCAAGACTCTGGATCCTTTAGGAGGTACTCGAGCTCAGGGCCTTTGAGCACTGGGAGGAGAAGGGAGTTCTGGCAGAGACTGAGAAGGTCGTCTGGCGGCAGTGCAAGTGAGCATGGATTTTCATTTAAACTATGGCCTCGTTCCAGTTAA 2448 46.16 MGMPLVLLVMTQCLAFTALSAHGSADPAVSPTSNSLSHGRKKHGTVAAAPPNKEFHILQSMEHSPTEAHHPHHRVRLSNIAVPPSSLPFKHQAKKHVHGSASSPTTSFYRHHHARNKFRNSAPAPSHLLSPHPYSQQGPSVSSFHSPVPSSTSWGSPSPAPSPAPLSRQINMHFHPPAVAPLGSSLKNMKTPPPPLVWTLPPPPPNEDCASLTCTEPLTYTPPGSPCGCVWPIQVKLRLSVALYTFFPLVSELADEIAAGVSLNHSQVRIMGANAANQQLDKTIILIDLVPLGEKFNHTTAFSIYEKFWLKKFFIKTSLYGGYEALYVRYPGLPPSPPSSISNIDDGSYSGHGNNGRVMKPLGVDVPQKQKHGLGGSMITVIVLSSVTGFVICIAVAWVLVLKCRGHVHQAEDIPHSLISSFAKPSGAAGSMMLGSRTSSTSVSFSSGVVTYTGSAKTFSLNDIERATDNFDASRVLGEGGFGLVYRGILDDGVEVAVKVLKRDDQQGGREFLAEVEMLSRLHHRNLVKLIGICTEEHTRCLVYELVPNGSVESHLHGVDKEASPLDWGARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARTALDEGNKHISTRVMGTFGYLAPEYAMTGHLLPPGQENLVAWARPLLTTKEGLETIIDPALKSSSPFDSAAKVAAIASMCVQPEVSHRPFMGEVVQALKLVCSEYDETKDLASKSFSQENLSIDVIRKSSRVLGELLEVSQVHHPGQDSGSFRRYSSSGPLSTGRRREFWQRLRRSSGGSASEHGFSFKLWPRSS* 816
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2034885 2041795 - Vvi9g175 Vvi9g175 791886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g175 815 ProSitePatterns Protein kinases ATP-binding region signature. 477 499 IPR017441 GO:0005524
Vvi9g175 815 Pfam Protein tyrosine and serine/threonine kinase 474 648 IPR001245 GO:0004672|GO:0006468
Vvi9g175 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Vvi9g175 815 MobiDBLite consensus disorder prediction 26 40 - -
Vvi9g175 815 Gene3D Phosphorylase Kinase; domain 1 444 546 - -
Vvi9g175 815 MobiDBLite consensus disorder prediction 130 153 - -
Vvi9g175 815 Gene3D Transferase(Phosphotransferase) domain 1 652 743 - -
Vvi9g175 815 Gene3D Transferase(Phosphotransferase) domain 1 547 651 - -
Vvi9g175 815 MobiDBLite consensus disorder prediction 119 169 - -
Vvi9g175 815 MobiDBLite consensus disorder prediction 763 783 - -
Vvi9g175 815 MobiDBLite consensus disorder prediction 764 783 - -
Vvi9g175 815 MobiDBLite consensus disorder prediction 24 46 - -
Vvi9g175 815 ProSiteProfiles Protein kinase domain profile. 471 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g175 815 PANTHER OS01G0750732 PROTEIN 7 814 - -
Vvi9g175 815 MobiDBLite consensus disorder prediction 83 107 - -
Vvi9g175 815 PANTHER OS01G0750732 PROTEIN 7 814 - -
Vvi9g175 815 SUPERFAMILY Protein kinase-like (PK-like) 450 718 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi9g175 Vvi11g177 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76840 PF00069 Pkinase 5.90E-36 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g175 - - vvi:100263472 1536.16