Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g191 ATGAAAATTTTGCTTGAGAAAGAGGGAAAAAGTATCCGAAAATATCCTCCAAGGATTTGGTTAATTCCAAAACTACCCTTTCCACATTGCTTAAGACGACGAAGAAGGCCCGGCGGTGCTGCCGGGCGTCGTCAACAAGCCTCCAGCGCTGGCGGCCTCTTCGTCCAGGAAGAGATCATCAGTCTTCCTAAACGCCGCGTGCAGCACCACCACCGCCACTCCGATCAGCAACGATACCAGAATGTTGAGTGTAGCGTGAGTCAACAAGAGGAAAACGATTGTAAGAATCAAAAGCACTATCAGCACCACACGATCGTCAATCGTACGGTGGAAAACCACCAGAGGTTCGTCGCGGAGGAAGTAGAGGAACAGCCACACCGCCATCATCACGATGAAGACGATTATCCGATTGACCGGATATTGAACATCTCTTTCCATGGCCTCCTGGTGGCGAGCCCCGATCTGAGACGTTCCTTTGCGCGGGAGACGAACTCGAGACTCGGAGAATCTCCCGCAGATGACGTCGGAATCGTGCCGTACGTCGTCATTTCCGGCGAGTCTCTGCTTAGAGGCGCTGGACAGTGGACTTCGTCCATGGGGAGAAAGCACAAGTTCTTCCATGGAACACTTGAAGCTACCATCTTCCATGCCACTCCTTACACTCCTTCATTCCCCTTCAATTGTATGTTTCTGAATGGAAAGGCTTGCTATGTGACTATCAAGATAGACGACAAGAAGGTTGCGAAGACGAGCCATGAAAGCGACCGTGTTTGGAACCAAACTTTCCAGATCTTATGTGCCCATCTGATTGATTCAACTATCACCATTACTTTGAAGACAAAGTGCTCCATCTTGGGGAGAATCCAAATCCAGGCTCATCAGATAGTACACGAAGCAAGTTTCATTGACGGGTACTTCCCCCTACTCATGGAAAATGGAAGGCCCAATCCAGAGCTCAAGCTCAGGTTCATGTTATGGTTTAGACCAGCAGAGTTTGAACCAACATGGGGGAATATACTCTGGAATGGTGACTTCCAGGGTGTAAAGAATGCTACATTTCCACAAAGATCAGACTGCAGTGTCATACTTTATCAGGATGCCCACCATTGCTCTACTTTTCAACCGCCATATAGTCTCTGTAAGGCCCCTAGGAAGCTTTGGGAGGATGTATACAAAGCCATTGATGATGCAAAGTACTTGATATACATTGCAGGCTGGTCTTTCAATCCAAAAATGGTGCTGGTTCGTGATCCTCAGACTGATATTCCATATGGACATGGAGTAAAGCTTGGTGAGTTACTGAAGCGGAAAGCTGAGGAAGGTGTGGCTGTGAGAATCATGGTTTGGGATGATGAAACGTCACTGCCACTCATCAAGAACGAAGGAGTCATGAGTACACACGATGAAGAGGCCTTTGCCTACTTCAAACATACAAAAGTGGTATGCAAATTGTGTCCCAGGTTACACTTCAAGTTCCCAACACTCTTTGCTCATCATCAGAAGACCATAACTGTAGACAGCCGGTCATCGATCTCCCCAAGTCATCGAGAAATCATGAGCTTTGTTGGCGGTTTAGATCTCTGCAATGGTCGCTATGATACAGAAGAACACTCCTTGTTTAGGACCCTTAATACAGAATCCCATTCTCAAGACTTCTACCAGACAAGCCTTATTGGAGCCTGCCTTCAAAAAGGGGGGCCAAGGGAGCCATGGCATGATGCTCATGCTTGTATTACTGGAGAAGCAGCCCGGGACGTGCTGACCAATTTTGAGCAGCGATGGAGTAAGCAATGTAACCCCTCTTTGCTAGTCCCCATTGGCACAATAACAGAGCTTGCAAGCATCCCCTCTGAAAGGGATTGGAAAGTACAGGTTTATCGCTCAATTGACCATGTGTCAGCAAGTCATCTGCCAAGAAACTTTGCTGTGGAGCAAAGCATCCATGAAGCTTATGTAGAAGCAATTCGGCGGGCTGAGAGGTTTATATACATCGAGAACCAGTACTTCATTGGGGGCTGCCATTTGTGGGAGAAAGACCAACATGCTGGCTGCAGAAACTTAATCCCTATCGAGATTGCACTTAAGGTGGCAAGCAAGATCAGAGCCAAGGAAAGATTTGCAGTGTATATCCTGATACCAATGTGGCCAGAAGGGGCACCAGAGAGTGAACCAGGTCAGGATATACTCCACTGGACTAGAGAAACAATGGCCATGATGTATAGGCTAATTGGAGAAGCTATAGACGAAAATGGCGGTTCAGGGCACCCTAGAGATTACTTGAACTTCTTCTGCCTTGCCAACAGAGAAGAGAAGGGCAAAGGGGAGTATGCTTCTCCACATCCTCCTCATCCTGCAACACAGTACTGGAATGCTCAGAAACATAGGAGATTCATGGTCTATGTCCATTCCAAGCTGATGATAGTGGACGACACATACATATTGATAGGATCTGCAAATGTGAACCAGCGGTCCATGGATGGGCAGCGCGACACTGAGATTGCAGTAGGCTGCTACCAGTCCAAAAATGGTGAAAATGAAATGTGTCGTGGGGATATTCATGCATACAGAATGTCACTGTGGTATGAACATACTGGTCTAGTTGAAGTAGTGTTCCAAGAGCCTCAAAGTCTGGAATGCGTTGAGAGACTCCGTTTCATTGGAGAGAAAATGTGGGGAATTTACAGTGCAGAAGAGGTAGAAGACATGGAAGGTGTCCACCTAGTGACCTACCCCGTGACTGTAACAAAGGATGGTTCTGTTGAGGATCTTGCAGAAGGTGGCAACTTTCCAGACACAAACACTCCAATAAGAGGGAGGAGATCCAGAGTTCTACCACCTATTTTCACCACATAA 2853 47.18 MKILLEKEGKSIRKYPPRIWLIPKLPFPHCLRRRRRPGGAAGRRQQASSAGGLFVQEEIISLPKRRVQHHHRHSDQQRYQNVECSVSQQEENDCKNQKHYQHHTIVNRTVENHQRFVAEEVEEQPHRHHHDEDDYPIDRILNISFHGLLVASPDLRRSFARETNSRLGESPADDVGIVPYVVISGESLLRGAGQWTSSMGRKHKFFHGTLEATIFHATPYTPSFPFNCMFLNGKACYVTIKIDDKKVAKTSHESDRVWNQTFQILCAHLIDSTITITLKTKCSILGRIQIQAHQIVHEASFIDGYFPLLMENGRPNPELKLRFMLWFRPAEFEPTWGNILWNGDFQGVKNATFPQRSDCSVILYQDAHHCSTFQPPYSLCKAPRKLWEDVYKAIDDAKYLIYIAGWSFNPKMVLVRDPQTDIPYGHGVKLGELLKRKAEEGVAVRIMVWDDETSLPLIKNEGVMSTHDEEAFAYFKHTKVVCKLCPRLHFKFPTLFAHHQKTITVDSRSSISPSHREIMSFVGGLDLCNGRYDTEEHSLFRTLNTESHSQDFYQTSLIGACLQKGGPREPWHDAHACITGEAARDVLTNFEQRWSKQCNPSLLVPIGTITELASIPSERDWKVQVYRSIDHVSASHLPRNFAVEQSIHEAYVEAIRRAERFIYIENQYFIGGCHLWEKDQHAGCRNLIPIEIALKVASKIRAKERFAVYILIPMWPEGAPESEPGQDILHWTRETMAMMYRLIGEAIDENGGSGHPRDYLNFFCLANREEKGKGEYASPHPPHPATQYWNAQKHRRFMVYVHSKLMIVDDTYILIGSANVNQRSMDGQRDTEIAVGCYQSKNGENEMCRGDIHAYRMSLWYEHTGLVEVVFQEPQSLECVERLRFIGEKMWGIYSAEEVEDMEGVHLVTYPVTVTKDGSVEDLAEGGNFPDTNTPIRGRRSRVLPPIFTT* 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2169386 2178042 - Vvi9g191 Vvi9g191 791902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g191 950 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 205 324 IPR035892 -
Vvi9g191 950 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 494 531 IPR001736 GO:0003824
Vvi9g191 950 PANTHER PHOSPHOLIPASE D ALPHA 4 203 950 - -
Vvi9g191 950 SUPERFAMILY Phospholipase D/nuclease 616 879 - -
Vvi9g191 950 Gene3D Endonuclease Chain A 609 845 - -
Vvi9g191 950 SMART pld_4 797 824 IPR001736 GO:0003824
Vvi9g191 950 SMART pld_4 494 531 IPR001736 GO:0003824
Vvi9g191 950 CDD PLDc_pPLD_like_2 639 841 - -
Vvi9g191 950 Pfam Phospholipase D C terminal 870 939 IPR024632 -
Vvi9g191 950 PANTHER PHOSPHOLIPASE D 203 950 IPR015679 -
Vvi9g191 950 Gene3D Endonuclease Chain A 366 608 - -
Vvi9g191 950 SUPERFAMILY Phospholipase D/nuclease 375 627 - -
Vvi9g191 950 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 797 824 IPR001736 GO:0003824
Vvi9g191 950 Pfam Phospholipase D Active site motif 495 531 IPR001736 GO:0003824
Vvi9g191 950 Pfam Phospholipase D Active site motif 800 824 IPR001736 GO:0003824
Vvi9g191 950 Pfam C2 domain 235 299 IPR000008 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g191 K01115 - vvi:100256679 1576.61