Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g224 ATGAATGTTAGAAGCTTCCCAGAAGGAGCCAGGAACTGTTATACCTTACGACCAGAACAAGAAAAGGATAATAAGTATTTGATCAGAGCTTTATTCATGTATGGGAATTATGACTCCAAGAATCAATTTCCAGAATTCAAACTATATCTGGGTACTGATGAATGGGACACTGTCAACATTGGGGATTCATCTACAGCTTTATGGAAGGAAATTATACACGCCCCGAAAACAAATGACATAGATGTGTGTCTAGTAAACATCGATTCTGGGACACCTTTCATTTCAGTGTTAGAGCTCCGACCGCTTAATAATTCCATTTATGATAAGACTGAACCCGGGTCGCTGCTATTCTATAACAGGTGGGATTTTGGTGCAGAACAAGATATGGAAATCAGGGACAAAGATGATGTTTTCGACCGCATTTGGAACCCATTCAGATTGGATTCCTGGGAATTCATTACTGCATCGTATGGGAGTTATACCCTTAGTACCAGTGAATATAGGCTTCCACGGACAGTCATGGCGACTGCTGCAACGCCTGCAAATGAAAGTGAATCCTTGCGCCTCTCTTTGAACATCAGTGGTGATCCTTCTCAGAAGTTATACATGTACATGCACTTTGCCGAGGTTGAGAAACTCAATGAAGGCGAGTTGAGAGAATTTACTATCTCACTGAATGATGATGAGTCATGGGGTGGTGGGGCTCTCACTCCTCCATACCTGTCTTCCGACACGTTGTATAGTACAAATTCTGTTAGTGGAAGCACCACAAACAAACTGTTATTTACAATTAAAAAGACAGGTAGATCCACACGTCCGCCCATTATCAATGCTATGGAGGTTTACAAGATAAAAGATTTCTCACAATCATCAACTCTCCAAGGCGATGTTGATGCTATCAAGAAGATCAAATCAGTGTACACAATGAGCAGAAACTGGCAAGGAGATCCATGTCTCCCGGAGTCGTACCGGTGGACTGGCCTGAGCTGCAGCAAGAGTGGTTCTCCTAGTATCATCTCCTTGAACCTCTCATCCAGCAGTCTGACTGGGAAGATAGACTCTTCATTCTCCACTCTCACCTCTTTGCAATATTTAGATTTATCTTACAATAACTTAACTGGAGAAATACCAGATTTTCTAGCTGAGCTGACTTCCTTGAACTCCCTGAACTTATCAGGGAACAATTTCACAGGGTCAGTTCCATTGGCTCTTCTTAGAAAATCAGATGAGGAATCCCTGTCTTTGAGTTTGGATGGGAATCCGTATCTTTGTAAGACAAACTCATGTGCTGAGGAGGAAGAGAAGCAGAAGAAGAAGGGTAGGAATATTACTGTTCCAGTAGTTGCATCCGTTGCATCCATTGCTTCAGTTCTACTCCTCTTAGCTGCATTAGCCACCTTGTGGAGATTTAAAATAAGAAGACAGCATGGAACAGATGGCAAACCTAAGGAAGAAAAAAAGTTATTGGATTCGAAGAATCAATGCTTCAGTTACTCTGAGGTGGTGAGCATCACTGACAACTTCCAAAAGGTGCTCGGAAAAGGAGGATTTGGAGCAGTTTACAGTGGCCATTTGAAAGATGGCACTCAAGTTGCTGTCAAGATGCTCTCGCCATCATCAGCTCAAGGAAACTTGGCTTCTCTGGTTGGATACTGTGATGAAGGTTCAAACATGGGGCTCATTTATGAGTACATGGCTAATGGGAACTTAGAAGAGCTTTTATCAGGTAAAAATGCACCTGTCTTGAGTTGGGAACAAAGACTTCGAATTGCAATTGATGCAGCACAAGCACTGGAATATTTGCATAATGGTTGCAAACCACCCATAATCCACAGAGATGTTAAGACTGCAAACATCTTACTGAATGAGAAACTGCAAGCCAAAGTTGGGGATTTTGGGATGTCCAGAATTATTCCCTTTGAATCTGAAACTCATGTATCAACTGCAGTTGTTGGCACACCCGGGTACCTTGATCCTGAGTATTACATAACAGCGAGGTTGAACGAGAAAAGTGATGTTTATAGCTTTGGGATTGTTCTGTTGGAGCTTATTTCAGGAAAACCTGCAATAATAGGTAGCCATGGGAACAAGGATCACATAGTCCAATGGGTTAGTCCAATTATTTCCAGAGGAGAAATAAGAAGCATTGTGGATCCGAGGTTAGAAGGAGACTTGATCAACACCAATTCTGCGTGGAAAGCTGTGGAGACTGCAATGGCTTGTGTTCCATCCATCTCCATCCAGAGGCCAACCATGAGTGAGGTAGTAGGGGAACTAAAGGAGTGTTTGAATATAGAGATAAGAGATGAAAGAGCTTATAATGTGAAAGAGGACAATGGCATAATATCAAGCTATTCACCTGAAATGGTTGTTTTAGGTATTGATGAAGATGCAATGGGTCCCCAAGCAAGGTAG 2415 42.19 MNVRSFPEGARNCYTLRPEQEKDNKYLIRALFMYGNYDSKNQFPEFKLYLGTDEWDTVNIGDSSTALWKEIIHAPKTNDIDVCLVNIDSGTPFISVLELRPLNNSIYDKTEPGSLLFYNRWDFGAEQDMEIRDKDDVFDRIWNPFRLDSWEFITASYGSYTLSTSEYRLPRTVMATAATPANESESLRLSLNISGDPSQKLYMYMHFAEVEKLNEGELREFTISLNDDESWGGGALTPPYLSSDTLYSTNSVSGSTTNKLLFTIKKTGRSTRPPIINAMEVYKIKDFSQSSTLQGDVDAIKKIKSVYTMSRNWQGDPCLPESYRWTGLSCSKSGSPSIISLNLSSSSLTGKIDSSFSTLTSLQYLDLSYNNLTGEIPDFLAELTSLNSLNLSGNNFTGSVPLALLRKSDEESLSLSLDGNPYLCKTNSCAEEEEKQKKKGRNITVPVVASVASIASVLLLLAALATLWRFKIRRQHGTDGKPKEEKKLLDSKNQCFSYSEVVSITDNFQKVLGKGGFGAVYSGHLKDGTQVAVKMLSPSSAQGNLASLVGYCDEGSNMGLIYEYMANGNLEELLSGKNAPVLSWEQRLRIAIDAAQALEYLHNGCKPPIIHRDVKTANILLNEKLQAKVGDFGMSRIIPFESETHVSTAVVGTPGYLDPEYYITARLNEKSDVYSFGIVLLELISGKPAIIGSHGNKDHIVQWVSPIISRGEIRSIVDPRLEGDLINTNSAWKAVETAMACVPSISIQRPTMSEVVGELKECLNIEIRDERAYNVKEDNGIISSYSPEMVVLGIDEDAMGPQAR* 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2510632 2515605 + Vvi9g224 Vvi9g224 791935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g224 804 SUPERFAMILY L domain-like 299 404 - -
Vvi9g224 804 CDD STKc_IRAK 512 761 - -
Vvi9g224 804 Gene3D Phosphorylase Kinase; domain 1 479 564 - -
Vvi9g224 804 ProSiteProfiles Protein kinase domain profile. 506 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g224 804 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 1 804 - -
Vvi9g224 804 ProSiteProfiles Leucine-rich repeat profile. 361 384 IPR001611 GO:0005515
Vvi9g224 804 Pfam Leucine rich repeat 340 396 IPR001611 GO:0005515
Vvi9g224 804 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Vvi9g224 804 Gene3D Ribonuclease Inhibitor 297 416 IPR032675 -
Vvi9g224 804 Gene3D Transferase(Phosphotransferase) domain 1 565 782 - -
Vvi9g224 804 Pfam Malectin-like domain 2 284 IPR024788 -
Vvi9g224 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Vvi9g224 804 SMART serkin_6 506 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g224 804 SUPERFAMILY Protein kinase-like (PK-like) 490 759 IPR011009 -
Vvi9g224 804 PANTHER OS07G0107800 PROTEIN-RELATED 1 804 - -
Vvi9g224 804 Pfam Protein kinase domain 509 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76844 PF12819 Malectin_like 3.50E-93 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g224 - - vvi:100242932 1518.06