Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g231 ATGGTAATTCTGAAATTCCATATTCAAGAATGGGTACAAATATCTCTTCGTAGTTGCTCCCCTTCATTGCTGAGGAGGCAAAGGAGGAGACCAATGGAAATGTTAGTTGTTGTTCTTGGATATTTGGCTCTTACTGCCATGGTTCTTGGGCAGGATCAATCAGGCTTCATAAGCATCGATTGCGGGATAAATCCGGGTTCCAGCTATTTTGATGCCTTAACCGAAATATACTATGCATCAGACTCAGAATTCATACACACTGGAATAAATTATGATGTTTCTGAGGAACACAGACCTAGGTTTGAAACTCGAGATCAGCAGCTCATGAATGTGAGGAGCTTCCCTGAAGGAGCCAAGAATTGTTACACTCTTCGACCGCAACAAGGCAAAGATCATAAGTACTTGATCAGAGCTTCCTTCATGTATGGGAACTATGACTCCAAAAATCAGCTTCCAGTGTTCAAACTATACGTGGGTGTTAATGAATGGGACACTGTGAAATTCAGCAATTCATATGATGTTGTTCGGAAAGAAATTATACATGTCCCGAGAACAGATCACATATATGTCTGTCTAGTGAACACTGGTTTTGGGTCACCTTTCATATCAGCATTAGAGTTGAGACAACTGAATAATTCCATTTATACAACTCAATCTGGATCATTGATACTCTTTAGGAGGCTTGATATTGGTTCAAAAACAAGTCAGACAGTCAGATACAAAGATGACGCTTTTGATCGTATTTGGGAACCATTCAGCCGGCCTTATTGGAAATCAGTCAGTGCATCCTATAGTAGTGATAGTTTAAGTGATAACCACTTTAAACCTCCATCCAAGGTCATGGCAACTGCTGTAACCCCTGCTGATGAGAGATATCCCTTGGAATTCCACTGGAATCTGGACAATTCTACTCGACAGTTCTATGTATACATGCACTTTGCTGAGGTTGAGGAGCTCCAATCCAACCAGTTGAGAGAATTTTATGTATCGCTTAATGGTTGGTTCTGGAGTCCCGAACCTATTGTTCCTGGAAGATTGGTTCCACATACTGGATTTAGCACACATTCCATAAGTGCATCATCTGAGCTATCACTTTCAATTTATAAGACACATAGATCCACTCTTCCACCAATTCTCAATGCTTTGGAGATTTATGAGATAAAACAATTGTTTCAATCATCAACTGTCCAGAGCAATGTTGATGCTATCAAGAAAATCAAGATGGTGTACAAGGTGAAGAAAAACTGGCAAGGAGATCCATGTCTTCCCATTGAGTTCTCATGGGATGGCCTGAGCTGCAGTGACAGCAATTCCATTTCCCTTAGTATCATCTCTTTGAACCTTTCATGGAGCAAGTTAACCGGGGAGATAGATTCTTCATTCTCCAGTCTCACATCATTAAAATATTTAGATTTATCTTACAACAGTTTGACTGGAAAAGTGCCAAACTTTCTGTCCAAACTTTCTTCCTTGAAGGCCCTGAACTTGTCAGGGAATAATCTGACAGGTTCAGTTCCATTGTCTCTCCTTGAAAAATCTAGAAATGGATCCCTGTCTTTGAGATTGGATGGGAATCCACATCTTTGTAAGAAAAACTCTTGTGAGGATGAGGAAGAGGAGGGCAAGGAGAAGACGAAGAATAATGTTATTGTTCCAGTAGTTGCATCCATTATTTCAATTCTAGTCCTCTTATTAGGTGAGGTAGCAGCCCTGTGGATATTTAAAAGGAGACAACAATACGATGGTATGAAATTGGACTCTATGAACTGCCACGTTAGTTACTCTGAGGTTGATAGAATCACTGATAACTTCAAAAAAATGCTTGGCCGAGGAGCATCAGGAAAAGTTTACCTTGGCCATTTAAGTGATGGCACCGAAGTTGCAGTCAAGATGCTGACACCTTCATCAGTTCTAGTGTTTAAGCAATTCAAGACTGAGGCTCAGCTGTTGACAAGAATTCATCACAAAAACTTAGTTTCTCTAATTGGATACTGTGATGAAGGTTCAAGAATGGTGCTCGTTTATGAGCATATGGCTGAGGGGAACTTAAAAGAGTATTTATCAGGTAAAAAAGAAATTGTCTTGAGTTGGGAACAAAGGCTTCAAATAGCAATTGATGCAGCACAAGCACTGGAATATTTACATGATGCTTGCAATCCACCCATAATCCATAGAGATGTAAAACCTGAAAACATCTTATTGACCAAAAAATTTCAAGCCAAAGTTGCAGATTTTGGGTGGTCTAGAAGTTTGCCCTCTGAAGGTGGAAGCTATGTATCAACTGCAATTGTTGGCACACCGGGGTACATTGACCCCGAGTACAACAGAACCTCATTACCAAGTAAGAAAACCGATGTTTATAGCTTTGGGATTGTTTTATTGGAGGTTATTTCGGGTCAACCTGTAATCATAAAGATCACAAAAGAGAGCTCATGTAACATAGCAGATTGGGTTCGCCTAGTAACTGCAAAAGGTGATATAAAAATGATTGTAGATCCAAGGTTACAAGGAGAATTTGAAGCCAATTCTGCCTGGAGAGCTGTAGAGACAGCAATGTCTTGTGTGCTACTCAGCTCCACAGATAGGCCAACCATGAGTCATGTAGTAGTGGAATTAAAAGAATGTCTGAAAATAGCCATGGTCCATGAAAGAACTGACAATGCGGAAGAGGACCAGGGTCCTGTTAGTATTGAAGCTGTCCATGAAAGAACTGACAATGTGGAAGAGGATTGTGATCCTTTTGGTAGTGAAGCTGCCTATGAAAGAACTGATGATGCAGCAGAGGACCATGGCCCTCTTGGTGTTGAAGCTGCCCATGAAGTAACCAACAATGCCAAAGAGGACCAGGGTCCTGTTGGTATTGAAGCTCCACATGAAAGAAATGACAGTGGGAGAGAGGGCCATGGTTCTGTTGGTATTGGAGCTGCCCATAAAAGAAATGACAATGGGGAAGAGGACCAGTGTCCTGTTGGTATTGAAGCTGCCCATGAAAGACATGACGATGGGAAAGAGGACCATGGTCCTGATGGTATTGAAGCTGCCCATGAAATTACTGACAATGCAGAAGAGGACCAAGGTCTTGTTGGTATTGAAGCCACCCAAGAAAGAACTGACATTGTGGAAGAGAACCATGGTCCTGTTGGTATCGAAGCTGCCCATGAAAGAAATGACAATGATGAAGAGGACCATGGTCCTGTTGGTATTGAAGCTACCCATGAAAGAACTGATAATGTGGAAGAGAACCATGGTCCTCTTGGTAGCGAAGCTGCAATGGCTATCCAAGAAAGGACAAACTCATATGGGGCGGCCAAGGAAAAGAAGAAGGAGAAGAAGAAGAATGTTGTAGTTTCACCAGTTGCATCAATTACTTCAGTTGTTGTCCCATCAGACATTGTTGTCAAACCCAATGAGGATGATAAAACATTTGAGCCAAAGAACCAACACCTTACTTATTCTGAGATTGAAAGAATCACTGAAAATTTCCAAAAGGAGCTTGGAAAAGGAGCATCAGCAATAGTTTATCATGGTCATTTAAGTAATGGCACTGAAGTTGCGGTCAAGAAACTGTCACCTTCATCAATTCTAGGGTCAAAGCAATTCAAAACTGAGGCTCAGCTTTTGACAAGAGTTCATCATAAAAACTTGGTTTCTCTATTTGGATACTGTGATGAAGGTTCAAACATGGTGCTCATTTATGAGTACATGGCAAAGGGGAATTTAAAAGCATATTTATCAGGTAAAACAGAAGCTGCCCTGAGTTGGGAACAAAGACTTCGAATAGCAATTGATGCAGCACAAGCATTGGAATATTTACACAATGGTTGCAACCCACCCATAATCCATAGAGACGTCAAAACTGAAAACATTCTATTAAACGAAAAATTGCAAGCCAAAGTGGCAGATTTTGGGTGGTCTAAAAGTATGCCTGTGGAAGGTGGAAGCTATGTATCAACTGCAATTGTTGGCACACCTGGCTACCTTGACCCTGAATATCACAGAAACTCAGTGCCGAATGAGAAAACCGATGTTTATAGCTTTGGGATTGTTTTGTTGGAGCTTATTTCAAGTAGACCTGCAATCATAAAGATCACAGAAGACAATCGATGCAACATAACATATTGGGTCCGCCCCATTATTGCAAAAGGGGATATAAGAATGATTGTAGATCCAAGGTTACAAGGAAAATTTGAGACTAATTCTGCCAGGAGAGCAATAGAGACAGCAATGTCATGTGTGTCACTCAGCTCCACTGACAGGCCTACCATGAGTGACATAATAGTAGAATTAAGAGAATGCCTAAAGATAGTGATGACCCATGAAAGAACGAAAGAGGGCCATGCTTCTGTTGGTATTGAAGCTGCAATGACTGTTCAAGAAAGTTTCAATGGAAATCAGGATTTCCTTACGACAGGCTCGAATGCGAAGGCTGCGGAGAAAGAGAAGGAGAAGGACGAGAAGAAGAAGAAAAAGAAGAAAAAGAATTTTATTGGTCCAGCAGTCACATCAATTACTTCAGTTTTAGTCCCCTCTGGTGCATTAGCCAGCTTGGGAAAATCTAAAAAGAAATGGCCACATGCTAAAGATAAGAGTTACTCCGAGGTTGCAAGAATCACGAACAACTTCCAGCAGGTGATTGGATGTGGAGCATTTGCATCAGTTTACCTAGGTTATTTAAGCGATGGTACTGAGGTAGCTGTCAAGTTGCTTTCATCTTCAACTAGAGGATCCCAGGACCTTCAGACAGAGGCTCAGCTGCTGACAAGAATTCGACATAAAAACTTGGTTTCTCTGCATGGATACCATGATGAAGGTTCAATCATTGCGCTCATTTATGAATATATGGTGAAGGGGAGCTTAAGAAAGTATCTATCAGATGAAAATGAAGTTGTTTTGAGCTGGAAGCAAAGAATTGGAATAGCACTTGATGTAGCACAAGGACTGGAATATCTACATGATGGTTGCAGGCCACCCATAATCCACAGAGACGTTACATCTGCAAACATCTTATTGAATGAAAAATTGCAAGCCAAAGTGGCAGATATGGGGTTGTCTAGAAGTCTACCCATTGATGATTTGACTGATATTTCCACTGTGGTTGTTGGCACACCCGGGTACCTTGACCCTGAGTATTTTCAATCCAATAGGGTGTCTATGAAAAGCGATGTCTATAGCTTTGGGGTTGTTCTGCTGGAACTTGTTTCAGGCCAACCTGCACTGATAAAGAGCACCAACGGTATAACTGATCACCTAATCAATTGGGTTCGACCCCTGATTGATAGGAGGGAAATAAGAGGAATTGTGGATCCAAGGTTAAATGGAGACTTTGACATTAGTTCTGCCTGGAAGGCTGTAGAAACAGCAATGGCTTGTGTAAGATTCAGCTCCGTTGATAGGCCAACCATGAGTGACATAGCATACGAATTAAAAGGGTGTGTAAATTGTTTAGCAATAGCAACTGGGGATGTGGAAGAGGACCTTGGTTCTTTTATTATTGAGGATGCAATGCTTCACCAACCAAGCTAG 5523 41.25 MVILKFHIQEWVQISLRSCSPSLLRRQRRRPMEMLVVVLGYLALTAMVLGQDQSGFISIDCGINPGSSYFDALTEIYYASDSEFIHTGINYDVSEEHRPRFETRDQQLMNVRSFPEGAKNCYTLRPQQGKDHKYLIRASFMYGNYDSKNQLPVFKLYVGVNEWDTVKFSNSYDVVRKEIIHVPRTDHIYVCLVNTGFGSPFISALELRQLNNSIYTTQSGSLILFRRLDIGSKTSQTVRYKDDAFDRIWEPFSRPYWKSVSASYSSDSLSDNHFKPPSKVMATAVTPADERYPLEFHWNLDNSTRQFYVYMHFAEVEELQSNQLREFYVSLNGWFWSPEPIVPGRLVPHTGFSTHSISASSELSLSIYKTHRSTLPPILNALEIYEIKQLFQSSTVQSNVDAIKKIKMVYKVKKNWQGDPCLPIEFSWDGLSCSDSNSISLSIISLNLSWSKLTGEIDSSFSSLTSLKYLDLSYNSLTGKVPNFLSKLSSLKALNLSGNNLTGSVPLSLLEKSRNGSLSLRLDGNPHLCKKNSCEDEEEEGKEKTKNNVIVPVVASIISILVLLLGEVAALWIFKRRQQYDGMKLDSMNCHVSYSEVDRITDNFKKMLGRGASGKVYLGHLSDGTEVAVKMLTPSSVLVFKQFKTEAQLLTRIHHKNLVSLIGYCDEGSRMVLVYEHMAEGNLKEYLSGKKEIVLSWEQRLQIAIDAAQALEYLHDACNPPIIHRDVKPENILLTKKFQAKVADFGWSRSLPSEGGSYVSTAIVGTPGYIDPEYNRTSLPSKKTDVYSFGIVLLEVISGQPVIIKITKESSCNIADWVRLVTAKGDIKMIVDPRLQGEFEANSAWRAVETAMSCVLLSSTDRPTMSHVVVELKECLKIAMVHERTDNAEEDQGPVSIEAVHERTDNVEEDCDPFGSEAAYERTDDAAEDHGPLGVEAAHEVTNNAKEDQGPVGIEAPHERNDSGREGHGSVGIGAAHKRNDNGEEDQCPVGIEAAHERHDDGKEDHGPDGIEAAHEITDNAEEDQGLVGIEATQERTDIVEENHGPVGIEAAHERNDNDEEDHGPVGIEATHERTDNVEENHGPLGSEAAMAIQERTNSYGAAKEKKKEKKKNVVVSPVASITSVVVPSDIVVKPNEDDKTFEPKNQHLTYSEIERITENFQKELGKGASAIVYHGHLSNGTEVAVKKLSPSSILGSKQFKTEAQLLTRVHHKNLVSLFGYCDEGSNMVLIYEYMAKGNLKAYLSGKTEAALSWEQRLRIAIDAAQALEYLHNGCNPPIIHRDVKTENILLNEKLQAKVADFGWSKSMPVEGGSYVSTAIVGTPGYLDPEYHRNSVPNEKTDVYSFGIVLLELISSRPAIIKITEDNRCNITYWVRPIIAKGDIRMIVDPRLQGKFETNSARRAIETAMSCVSLSSTDRPTMSDIIVELRECLKIVMTHERTKEGHASVGIEAAMTVQESFNGNQDFLTTGSNAKAAEKEKEKDEKKKKKKKKNFIGPAVTSITSVLVPSGALASLGKSKKKWPHAKDKSYSEVARITNNFQQVIGCGAFASVYLGYLSDGTEVAVKLLSSSTRGSQDLQTEAQLLTRIRHKNLVSLHGYHDEGSIIALIYEYMVKGSLRKYLSDENEVVLSWKQRIGIALDVAQGLEYLHDGCRPPIIHRDVTSANILLNEKLQAKVADMGLSRSLPIDDLTDISTVVVGTPGYLDPEYFQSNRVSMKSDVYSFGVVLLELVSGQPALIKSTNGITDHLINWVRPLIDRREIRGIVDPRLNGDFDISSAWKAVETAMACVRFSSVDRPTMSDIAYELKGCVNCLAIATGDVEEDLGSFIIEDAMLHQPS* 1841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2576731 2603103 + Vvi9g231 Vvi9g231 791942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g231 1840 CDD STKc_IRAK 1545 1810 - -
Vvi9g231 1840 SMART serkin_6 1159 1436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g231 1840 SMART serkin_6 602 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g231 1840 SMART serkin_6 1539 1809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g231 1840 ProSiteProfiles Protein kinase domain profile. 1539 1809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g231 1840 Gene3D Phosphorylase Kinase; domain 1 575 677 - -
Vvi9g231 1840 Gene3D Phosphorylase Kinase; domain 1 1514 1613 - -
Vvi9g231 1840 Gene3D Phosphorylase Kinase; domain 1 1131 1234 - -
Vvi9g231 1840 ProSitePatterns Protein kinases ATP-binding region signature. 608 641 IPR017441 GO:0005524
Vvi9g231 1840 Pfam Leucine rich repeat 445 501 IPR001611 GO:0005515
Vvi9g231 1840 CDD STKc_IRAK 608 874 - -
Vvi9g231 1840 PRINTS Leucine-rich repeat signature 467 480 - -
Vvi9g231 1840 PRINTS Leucine-rich repeat signature 488 501 - -
Vvi9g231 1840 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1658 1670 IPR008266 GO:0004672|GO:0006468
Vvi9g231 1840 ProSiteProfiles Protein kinase domain profile. 602 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g231 1840 MobiDBLite consensus disorder prediction 952 966 - -
Vvi9g231 1840 ProSitePatterns Protein kinases ATP-binding region signature. 1165 1188 IPR017441 GO:0005524
Vvi9g231 1840 PANTHER OS07G0107800 PROTEIN-RELATED 1465 1814 - -
Vvi9g231 1840 PANTHER OS07G0107800 PROTEIN-RELATED 1103 1440 - -
Vvi9g231 1840 PANTHER OS07G0107800 PROTEIN-RELATED 53 883 - -
Vvi9g231 1840 CDD STKc_IRAK 1165 1429 - -
Vvi9g231 1840 SUPERFAMILY Protein kinase-like (PK-like) 588 874 IPR011009 -
Vvi9g231 1840 Gene3D Ribonuclease Inhibitor 400 528 IPR032675 -
Vvi9g231 1840 ProSiteProfiles Protein kinase domain profile. 1159 1433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g231 1840 Pfam Malectin-like domain 59 387 IPR024788 -
Vvi9g231 1840 Pfam Protein tyrosine and serine/threonine kinase 1161 1428 IPR001245 GO:0004672|GO:0006468
Vvi9g231 1840 Pfam Protein tyrosine and serine/threonine kinase 1541 1738 IPR001245 GO:0004672|GO:0006468
Vvi9g231 1840 ProSiteProfiles Leucine-rich repeat profile. 490 511 IPR001611 GO:0005515
Vvi9g231 1840 Coils Coil 1474 1494 - -
Vvi9g231 1840 Pfam Protein kinase domain 605 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g231 1840 ProSitePatterns Protein kinases ATP-binding region signature. 1545 1567 IPR017441 GO:0005524
Vvi9g231 1840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Vvi9g231 1840 SUPERFAMILY L domain-like 416 509 - -
Vvi9g231 1840 MobiDBLite consensus disorder prediction 943 987 - -
Vvi9g231 1840 SUPERFAMILY Protein kinase-like (PK-like) 1141 1428 IPR011009 -
Vvi9g231 1840 MobiDBLite consensus disorder prediction 1469 1491 - -
Vvi9g231 1840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1279 1291 IPR008271 GO:0004672|GO:0006468
Vvi9g231 1840 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 1465 1814 - -
Vvi9g231 1840 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 1103 1440 - -
Vvi9g231 1840 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 53 883 - -
Vvi9g231 1840 SUPERFAMILY Protein kinase-like (PK-like) 1525 1807 IPR011009 -
Vvi9g231 1840 Gene3D Transferase(Phosphotransferase) domain 1 1614 1822 - -
Vvi9g231 1840 Gene3D Transferase(Phosphotransferase) domain 1 678 897 - -
Vvi9g231 1840 Gene3D Transferase(Phosphotransferase) domain 1 1235 1453 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76848 PF12819 Malectin_like 1.20E-110 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g231 - - vvi:100241278 3483.73