Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g233 ATGGCCTTGAGTGCAGCTACAATGGTTACAATTCCCCCAGGATCATCTCTCTCTGAGGACCTGTCTTCAAGTGGGTTGTCCGGGAAAATAGACTCTTCACTGTCCAATCTCGAATCCTTACAGTACTTAGATTTATCAAACAATAGTCTAACTGGAGAAGTGCCAGATTTTCTCAGCCAACTGCCTCTATTGAAGACCCTAAACTTATCAGGAAATGAATTCACAGGTTCAGTTCCATCACTTCTTATCCAAAGATCCAAAAATGGATCCCTCTCTTTGAGATGCTATCAGAACAATCAGCTCAAGGTAAACCCATTTGCATTACAGGCTCAGCTGTTGACAAAAGTTCATCATCGGAACTTGGCTCCCCTAATTGGATACTGTAATGAAGGACGATACAAGGGGATTGTGTATGAGTATATGGCTAATGGAAACTTGCGAGAACATTTGTCAGGTGCAGGAAAGGACACTCCGGTCTTGAGTTGGGAACAAAGGCTTCAAATAGCAGTTGATGCAGCACAAGCATTTGAATATTTACATGAAGGTTGCAAACCACCAATAATCCACAGAGATGTTAAGACTTCCAACATTTTGTTGGATGGAAAATTGCAAGCAAAAGTGGCTGATTTTGGGCTGTCCAGATTCATGCCATCAGAGAGTAGAACTATTGTATCAACTCAAGTTGCTGGCACACCCGGCTACCTCGATCCTGAGTACTACATATCGAACAATCTGAATGAGAAAAGCGATGTTTACGCCTTTGGGATAGTCCTGTTGGAGCTGGTCACTGGCCACCCTGCAATCATACCAGGCCATGAGAACACACACTTAGTTGACTGGCTCAGTCCCAGGCTTGCAGGAGGGGAAATAAGAAGCATTGTAGACTCTAGGCTAAATGGAGATTTCAACCCCAACTCCGCCTGGAAACTTGTAGAGACAGCAATGGCATGTGTGCCCAGAAGCTCCATACAAAGGCCAACAATGAGTCAAGTGGTTGCGGACCTGAAGGAGTGTCTGCAGATGGAAATGCACCGCAACAAAAGTGCTTCACAGTCTAGAACATATCAAGATACAGCATCAAGTACCCGAAGACAAGAAGAACGAAATGGCGTGACGTCGATAGTGCAATCGAACCAGGCGGCAGGAAACCCTAACTTCGACGGGAATCCGCCGGTGGCCCCAACTCCGCTGGGAACAAACATGACGGGCATCTGTTTCAAAGATCAGCTATGGTTAAACTCCTACCCTAACTCAAATGAGCATATGTTTGGAACTCCAGATCAGCAGCTTATGACTGTGAGAAGCTTTCCAGAAGGAACCAAGAATTGTTACACTCTTCAACCACAACAAGGCAAAGATAATAAGTACTTGATCAGAGCTTCCTTCATGTATGGGAACTATGACTCCAAGAATCAACTTCCAGAGTTCAAACTATATCTGGGTGTTAATGAATGGGATGCTGTGAAATTCAACCATTCATATGATATTGTCAGGAAGGAAATTATACATGTCCCAAGAACAGGTCACATAGATGTCTGCCTAGTGAACACTGGTTCTGGGTCACCTTTCATATCGGCATTAGAGTTGAGACAACTGAATAATTCCATTTATTCAACTCAATCTGGATCATTGATACTCTTTAAGAGGCTTGATATTGGTTCAACACGTCAGACAGTCAGATACAAAGATGACGCTTTTGATCGCATTTGGGAACCATTCAGCCGGCCTTATTGGAAATCAGTGAGCGCATCCTATAGTAGTGATACTTTAAGTGATAACCACTTTAAACCTCCATCCAAGGTCATGGCAACTGCTGTAACCCCTGCTGATGAAAGATATCCCTTGGAATTCCACTGGAATCTGGACAATTCTACTCGACAGTTCTATGTATACACGCACTTTGCTGAGGTTGAGGAGCTCCAATCCAACCAGTTGAGAGAATTGTATGTATCACTTAATGGTTGGTTCTGGAGTCCTGAACCTATTGTTCCTGGAAGATTGGTTCCACATACTGGATTTAGCGCACATTCCATAAGTGCATCATCTGAGCTATCGCTTTCAATTTTTAAGACACACAGATCCACTCTTCCACCAATTCTCAATGCTTTGGAGATTTATGAGATAAAACAGTTGTTTCAATCATCAACTGTCCAGAGCAATGTTGATGCTATCAAGAAAATCAAGGCAGTTTACAAGGTGAAGAAAAACTGGCAAGGAGATCCATGTCTTCCCATTGAGTTCTCATGGAATGGCCTGAGCTGCAGTGACAACAGTCCCCTTTCCCCTAGCACCGTCTCTTTCAGGAACCTTTCTTGGAGCAAGTTAACTGGGAAGATAGATTCTTCATTCTCCAATCTCACATCATTAAAATCTTTAGATTTATCTTACAATAGTTTGACTGGAGAAGTGCCAAACTTTCTATCTAAACTGCCTTCCTTGAAGACCCTGAACTTGTCAGGGAATAATCTCACAGGATCAGTTCCATTGGCTCTCATTGAAAAATCTAGAAATGGATCCCTGTCTTTGAGATTGGATGGAAATCTGAATCTTTGTAAGAAAAACTCTTGTGAGGAAGAGGAGGACAAAGAGAAGTCCAGTAATAATGTTATTGTTCCATTAGTTGCATCCATTATTTCAGTTCTAGTCCTCTTATTAGGTGAAGTAGCAGCCTTGTGGATATTTAAAAGGAGACAACAACATGGTATTCTTCTTTGTGGTATGGCATTGGACTCAATGAACCCCCGCCTTAGTTACTCTGAGGTCAATAGAATCACTGGCAACTTCAAAAAGCTGCTTGACCAAGGAGAATCAGCAGAAGTTTACCTTGGCCATTTAAGTGATGGCACTGAAGTTGCAGTCAAGATGCTGACACCTTCATCAGTTCTAGTGTTTAAGCAATTCAAGACTGAGGCAAGCTTCTCTACACAAGCAAAAAGAAAAGTCAATTTCAATGTCGTTGGTTGTTTTCAGCATTCATGTCCAAAAGCCATGCATTTTGACAAAACTGCAGAATCATTTAACTTATCATGCATGCATGCAGGCAAAAAAGAAACTGTCTTGAGTTGGGAACAAAGGCTTCGAATAGCAATTAACACGGCACAAGCTTTGGAATATTTACACGATGGTTGCAATCCGCCCATAATCCATAGAGATGTTAAAACTGAAAATATCTTATTGAATGAAAAAATTCAAGCCAAAGTTGCAGCTTTTGGGTGGTCTAGAAGTATGCCCTCTGAAGGTGGAAGCTATGTATCAACTGCAATTGTTGGCACACCGGGGTACATCGACCCCGAGTACGACAAAACCTCAGTACCAAGTAAGAAAACTGATATTTATAGCTTTGGGATTGTTTTATTGGAGCTTATTTCGGGTCGACCTGCAATCATAAAGATCACAAAAGAGAGCCCATTCAGCTCCATAGATAGGCCAACCATGAACATTGTTGTCAAACCTAACGAGGATGATAAAACATTTGAGCCAAAGAACCAACACCTTACTTATTTTGAGGTTGAAAGAATCACTGACAATTTCCAAAAGGAGCTTGGAAGAGGAGCATCATCAATAGTTTATCATGGTCATTTAAGTAATGGCACTGAAGTTGCAGTCAAGAAGCTGTCACCTTCATCAATTCTAGGGTCAAAGCAATTCAAAACTGAGGCTCAGCTTTTGACACGAGTTCATCATAAAAACTTGGTTTCTCTATTTGGATACTGTGATGAAGGTTCAAACATGGTGCTCATTTATGAGTATATGGCAAAGGGGAATGTAAAAGCATATTTATCAGGTAAAACAGAAGCTGTCCTGAGTTGGGAACAAAGACTTCAAATAGCAATTGATGCAGCACAAGCACTGGAATATTTACACAATGGTTGCAACCCACCCATAATCCATAGAGATATCAAAACTGAAAACATCCTATTGAATGAAAAATTGCAAGCGAAAGTGGCAGATTTTGGTTGGTCTAAAAGTATGCCTGCTGAAGGTGGAAGCTATGTATTAACTGCAATTGTTGGCACACCTGGCTACCTCGACCCTGAATATCACAGAAGCTCAGTGCCAAATGAGAAAACCGATGTTTATAGCTTTGGGATTGTTTTGTTGGAGCTTATTTCAGGTAGGCCTGCAATCATAAAGATAACAAAAGAGAACCTATGTAACATAACAAATTGGGTCCACCACATCATTGCAAAAGGGGATATAAGAATGATTGTAGATCCAAGGTTACAAGGAGAATTTGAGACCAATTCTGCCAGGAGAACTATAGAGACAGCAATGTCCTGTGTATCATTCAGCTCCACTGAGAGGCCTACTATGAGCGACATAGTAGTAGAATTAAGAGAATGTCTAAAAATAGCGATGGCCCATGAAAGAACTAACAATTTGGAAGAGGACCATGATTCTGCTGGTATTGAAGCTGCAATGACTGCTGAAGAAAGGTAG 4440 41.51 MALSAATMVTIPPGSSLSEDLSSSGLSGKIDSSLSNLESLQYLDLSNNSLTGEVPDFLSQLPLLKTLNLSGNEFTGSVPSLLIQRSKNGSLSLRCYQNNQLKVNPFALQAQLLTKVHHRNLAPLIGYCNEGRYKGIVYEYMANGNLREHLSGAGKDTPVLSWEQRLQIAVDAAQAFEYLHEGCKPPIIHRDVKTSNILLDGKLQAKVADFGLSRFMPSESRTIVSTQVAGTPGYLDPEYYISNNLNEKSDVYAFGIVLLELVTGHPAIIPGHENTHLVDWLSPRLAGGEIRSIVDSRLNGDFNPNSAWKLVETAMACVPRSSIQRPTMSQVVADLKECLQMEMHRNKSASQSRTYQDTASSTRRQEERNGVTSIVQSNQAAGNPNFDGNPPVAPTPLGTNMTGICFKDQLWLNSYPNSNEHMFGTPDQQLMTVRSFPEGTKNCYTLQPQQGKDNKYLIRASFMYGNYDSKNQLPEFKLYLGVNEWDAVKFNHSYDIVRKEIIHVPRTGHIDVCLVNTGSGSPFISALELRQLNNSIYSTQSGSLILFKRLDIGSTRQTVRYKDDAFDRIWEPFSRPYWKSVSASYSSDTLSDNHFKPPSKVMATAVTPADERYPLEFHWNLDNSTRQFYVYTHFAEVEELQSNQLRELYVSLNGWFWSPEPIVPGRLVPHTGFSAHSISASSELSLSIFKTHRSTLPPILNALEIYEIKQLFQSSTVQSNVDAIKKIKAVYKVKKNWQGDPCLPIEFSWNGLSCSDNSPLSPSTVSFRNLSWSKLTGKIDSSFSNLTSLKSLDLSYNSLTGEVPNFLSKLPSLKTLNLSGNNLTGSVPLALIEKSRNGSLSLRLDGNLNLCKKNSCEEEEDKEKSSNNVIVPLVASIISVLVLLLGEVAALWIFKRRQQHGILLCGMALDSMNPRLSYSEVNRITGNFKKLLDQGESAEVYLGHLSDGTEVAVKMLTPSSVLVFKQFKTEASFSTQAKRKVNFNVVGCFQHSCPKAMHFDKTAESFNLSCMHAGKKETVLSWEQRLRIAINTAQALEYLHDGCNPPIIHRDVKTENILLNEKIQAKVAAFGWSRSMPSEGGSYVSTAIVGTPGYIDPEYDKTSVPSKKTDIYSFGIVLLELISGRPAIIKITKESPFSSIDRPTMNIVVKPNEDDKTFEPKNQHLTYFEVERITDNFQKELGRGASSIVYHGHLSNGTEVAVKKLSPSSILGSKQFKTEAQLLTRVHHKNLVSLFGYCDEGSNMVLIYEYMAKGNVKAYLSGKTEAVLSWEQRLQIAIDAAQALEYLHNGCNPPIIHRDIKTENILLNEKLQAKVADFGWSKSMPAEGGSYVLTAIVGTPGYLDPEYHRSSVPNEKTDVYSFGIVLLELISGRPAIIKITKENLCNITNWVHHIIAKGDIRMIVDPRLQGEFETNSARRTIETAMSCVSFSSTERPTMSDIVVELRECLKIAMAHERTNNLEEDHDSAGIEAAMTAEER* 1480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2626914 2651601 + Vvi9g233 Vvi9g233 791944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g233 1479 SUPERFAMILY Protein kinase-like (PK-like) 105 335 IPR011009 -
Vvi9g233 1479 ProSiteProfiles Leucine-rich repeat profile. 39 61 IPR001611 GO:0005515
Vvi9g233 1479 PRINTS Leucine-rich repeat signature 789 802 - -
Vvi9g233 1479 PRINTS Leucine-rich repeat signature 810 823 - -
Vvi9g233 1479 Gene3D Ribonuclease Inhibitor 6 89 IPR032675 -
Vvi9g233 1479 Gene3D Ribonuclease Inhibitor 721 843 IPR032675 -
Vvi9g233 1479 SUPERFAMILY Protein kinase-like (PK-like) 1157 1445 IPR011009 -
Vvi9g233 1479 CDD STKc_IRAK 1181 1445 - -
Vvi9g233 1479 SUPERFAMILY L domain-like 20 91 - -
Vvi9g233 1479 SMART serkin_6 1175 1449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g233 1479 SMART serkin_6 80 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g233 1479 SMART serkin_6 926 1168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g233 1479 ProSiteProfiles Protein kinase domain profile. 1175 1449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g233 1479 SUPERFAMILY Protein kinase-like (PK-like) 911 1140 IPR011009 -
Vvi9g233 1479 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 17 99 - -
Vvi9g233 1479 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 1147 1456 - -
Vvi9g233 1479 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 106 347 - -
Vvi9g233 1479 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 425 1130 - -
Vvi9g233 1479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Vvi9g233 1479 Pfam Protein kinase domain 1178 1442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g233 1479 Pfam Protein kinase domain 930 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g233 1479 ProSiteProfiles Protein kinase domain profile. 64 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi9g233 1479 ProSitePatterns Protein kinases ATP-binding region signature. 1181 1204 IPR017441 GO:0005524
Vvi9g233 1479 Pfam Protein tyrosine and serine/threonine kinase 103 335 IPR001245 GO:0004672|GO:0006468
Vvi9g233 1479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1295 1307 IPR008271 GO:0004672|GO:0006468
Vvi9g233 1479 Gene3D Phosphorylase Kinase; domain 1 1181 1251 - -
Vvi9g233 1479 Gene3D Phosphorylase Kinase; domain 1 90 141 - -
Vvi9g233 1479 Pfam Malectin-like domain 427 708 IPR024788 -
Vvi9g233 1479 SUPERFAMILY L domain-like 730 831 - -
Vvi9g233 1479 PANTHER OS07G0107800 PROTEIN-RELATED 425 1130 - -
Vvi9g233 1479 PANTHER OS07G0107800 PROTEIN-RELATED 1147 1456 - -
Vvi9g233 1479 PANTHER OS07G0107800 PROTEIN-RELATED 106 347 - -
Vvi9g233 1479 PANTHER OS07G0107800 PROTEIN-RELATED 17 99 - -
Vvi9g233 1479 MobiDBLite consensus disorder prediction 344 371 - -
Vvi9g233 1479 Pfam Leucine rich repeat 20 73 IPR001611 GO:0005515
Vvi9g233 1479 Pfam Leucine rich repeat 770 823 IPR001611 GO:0005515
Vvi9g233 1479 Gene3D Phosphorylase Kinase; domain 1 908 997 - -
Vvi9g233 1479 Gene3D Transferase(Phosphotransferase) domain 1 1008 1176 - -
Vvi9g233 1479 Gene3D Transferase(Phosphotransferase) domain 1 142 364 - -
Vvi9g233 1479 Gene3D Transferase(Phosphotransferase) domain 1 1252 1471 - -
Vvi9g233 1479 SMART LRR_typ_2 810 834 IPR003591 -
Vvi9g233 1479 SMART LRR_typ_2 786 809 IPR003591 -
Vvi9g233 1479 SMART LRR_typ_2 37 60 IPR003591 -
Vvi9g233 1479 SMART LRR_typ_2 61 84 IPR003591 -
Vvi9g233 1479 ProSiteProfiles Protein kinase domain profile. 926 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76849 PF12819 Malectin_like 6.30E-97 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g233 - - vvi:100253270 1264.21